iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000005840.3	ENSXETT00000012848.2	ENSXETP00000012848.2
ENSXETG00000005840.3	ENSXETT00000066185.1	ENSXETP00000063287.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-34	116.8	37	67
UBD/Beta-Prp	1.10e-74	251.5	2	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H ++v++++f  + +l+vsG+dD +ikvW++
   Q: 37   HDGPVRGIDFhkQQPLFVSGGDDYKIKVWNY 67
           99********97449**************96 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           + f+p++++++t+  +g i++wd+++ +l+ ++ +h+++v+ ++f+++++++v+g++D+ ikvw+++ + c+ tl gh d+++++ f+ 
   Q: 2    LSFHPKRPWVLTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH 90
           579************************************************************************************** PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl........................... 166
           +  +++s+s+d+tir+w++++++c+  +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+                           
   Q: 91   EYPWILSASDDQTIRIWNWQSRTCVC-VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIsglrkknlspgaveadvrgisgvdlfg 178
           **************************.************************************************************** PP
   S: 167  ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrs 253
            ++ ++++  +gh++ v++ +f+++++ +vsg++d++vk+w + +++   v+t++gh +nv++  f+p++e+++s s+D+sir+Wd+ +
   Q: 179  TSDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAweVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSK 267
           666666666666********************************888888*************************************** PP
   S: 254  gdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           ++ ++t+ + +++++  a+ +++ n +++g  d+   ++kl++++p
   Q: 268  RTGVQTFRRDHDRFWVLAA-HPNLNLFAAG-HDGGMIVFKLERERP 311
           *******************.5554444444.589999999988765 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

GLSFHPKRPW VLTSLHNGVI QLWDYRMCTL IDKFDEHDGP VRGIDFHKQQ PLFVSGGDDY 60
KIKVWNYKLR RCLFTLLGHL DYIRTTFFHH EYPWILSASD DQTIRIWNWQ SRTCVCVLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCTGAGCT TCCACCCGAA GAGACCGTGG GTCCTCACCA GCCTGCACAA TGGGGTCATC 60
CAGCTGTGGG ACTACCGCAT GTGCACCCTT ATCGACAAGT TTGATGAGCA CGACGGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0030903--P:notochord development
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER
GO:0061053--P:somite development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	51.38	0.00e+00	1212.00
IUUC-Aml-001758	Ailuropoda melanoleuca	89.27	0.00e+00	2232.00
IUUC-Atr-002493	Amborella trichopoda	51.42	0.00e+00	1201.00
IUUC-Apl-003385	Anas platyrhynchos	88.49	0.00e+00	1867.00
IUUC-Aca-005154	Anolis carolinensis	94.33	1.00e-112	398.00
IUUC-Aly-006020	Arabidopsis lyrata	58.31	0.00e+00	989.00
IUUC-Ath-007058	Arabidopsis thaliana	58.71	0.00e+00	984.00
IUUC-Ago-007992	Ashbya gossypii	43.04	0.00e+00	942.00
IUUC-Acl-008027	Aspergillus clavatus	54.45	0.00e+00	917.00
IUUC-Afl-008644	Aspergillus flavus	47.42	0.00e+00	1093.00
IUUC-Afu-008964	Aspergillus fumigatus	47.55	0.00e+00	1100.00
IUUC-Ani-009379	Aspergillus nidulans	53.92	0.00e+00	920.00
IUUC-Ang-009756	Aspergillus niger	48.00	0.00e+00	1113.00
IUUC-Aor-010174	Aspergillus oryzae	47.42	0.00e+00	1092.00
IUUC-Ate-010302	Aspergillus terreus	47.52	0.00e+00	1126.00
IUUC-Ame-011229	Astyanax mexicanus	82.10	0.00e+00	2054.00
IUUC-Bgr-012300	Blumeria graminis	46.87	0.00e+00	1071.00
IUUC-Bta-012524	Bos taurus	89.90	0.00e+00	2212.00
IUUC-Bci-013781	Botrytis cinerea	46.87	0.00e+00	1102.00
IUUC-Bdi-014214	Brachypodium distachyon	51.02	0.00e+00	1221.00
IUUC-Bol-015925	Brassica oleracea	58.24	0.00e+00	974.00
IUUC-Bra-016978	Brassica rapa	57.40	0.00e+00	969.00
IUUC-Cel-018115	Caenorhabditis elegans	60.68	0.00e+00	1034.00
IUUC-Cja-019107	Callithrix jacchus	87.32	0.00e+00	2174.00
IUUC-Cfa-020675	Canis familiaris	89.56	0.00e+00	2218.00
IUUC-Cpo-021813	Cavia porcellus	90.15	0.00e+00	2237.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	61.67	0.00e+00	1013.00
IUUC-Csa-023523	Chlorocebus sabaeus	90.07	0.00e+00	2246.00
IUUC-Cho-024704	Choloepus hoffmanni	76.52	0.00e+00	1717.00
IUUC-Cin-025572	Ciona intestinalis	69.57	0.00e+00	1732.00
IUUC-Csv-025864	Ciona savignyi	70.75	0.00e+00	1154.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	54.46	0.00e+00	930.00
IUUC-Cne-027053	Cryptococcus neoformans	49.80	0.00e+00	1144.00
IUUC-Cme-027222	Cyanidioschyzon merolae	37.37	2.00e-122	434.00
IUUC-Dre-027421	Danio rerio	82.77	0.00e+00	2103.00
IUUC-Dno-029303	Dasypus novemcinctus	89.77	0.00e+00	2231.00
IUUC-Dor-030290	Dipodomys ordii	88.89	0.00e+00	1001.00
IUUC-Dse-031543	Dothistroma septosporum	44.14	0.00e+00	1036.00
IUUC-Dme-031945	Drosophila melanogaster	72.31	0.00e+00	1192.00
IUUC-Ete-032873	Echinops telfairi	83.33	0.00e+00	1902.00
IUUC-Eca-033773	Equus caballus	87.62	0.00e+00	2159.00
IUUC-Eeu-034874	Erinaceus europaeus	75.90	0.00e+00	1312.00
IUUC-Fca-035739	Felis catus	88.78	0.00e+00	2158.00
IUUC-Fal-037263	Ficedula albicollis	82.84	0.00e+00	1967.00
IUUC-Fox-037738	Fusarium oxysporum	47.22	0.00e+00	1130.00
IUUC-Fso-038153	Fusarium solani	47.31	0.00e+00	1117.00
IUUC-Gmo-039602	Gadus morhua	78.71	0.00e+00	1914.00
IUUC-Ggr-039931	Gaeumannomyces graminis	53.93	0.00e+00	930.00
IUUC-Gga-040590	Gallus gallus	90.07	0.00e+00	2201.00
IUUC-Gac-041318	Gasterosteus aculeatus	82.56	0.00e+00	2060.00
IUUC-Gma-043894	Glycine max	52.72	0.00e+00	1241.00
IUUC-Ggo-045029	Gorilla gorilla	89.27	0.00e+00	2241.00
IUUC-Hsa-046078	Homo sapiens	89.19	0.00e+00	2240.00
IUUC-Hvu-047556	Hordeum vulgare	51.83	0.00e+00	1239.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	86.28	0.00e+00	1516.00
IUUC-Kpa-049256	Komagataella pastoris	43.37	0.00e+00	994.00
IUUC-Lch-049706	Latimeria chalumnae	89.30	0.00e+00	2175.00
IUUC-Lpe-051316	Leersia perrieri	58.74	0.00e+00	996.00
IUUC-Loc-051867	Lepisosteus oculatus	66.16	0.00e+00	1069.00
IUUC-Lma-053138	Leptosphaeria maculans	54.18	0.00e+00	936.00
IUUC-Laf-053510	Loxodonta africana	89.57	0.00e+00	2234.00
IUUC-Mcc-055836	Macaca mulatta	88.94	0.00e+00	2231.00
IUUC-Meu-056238	Macropus eugenii	83.81	0.00e+00	1057.00
IUUC-Mor-057172	Magnaporthe oryzae	46.82	0.00e+00	1106.00
IUUC-Mpo-057300	Magnaporthe poae	47.05	0.00e+00	1091.00
IUUC-Mtr-058248	Medicago truncatula	52.45	0.00e+00	1249.00
IUUC-Mla-059019	Melampsora laricipopulina	49.84	0.00e+00	1175.00
IUUC-Mga-059499	Meleagris gallopavo	90.00	0.00e+00	2197.00
IUUC-Mvi-060336	Microbotryum violaceum	50.04	0.00e+00	1149.00
IUUC-Mmr-061102	Microcebus murinus	89.67	0.00e+00	2203.00
IUUC-Mdo-062594	Monodelphis domestica	89.90	0.00e+00	2270.00
IUUC-Mmu-063736	Mus musculus	89.43	0.00e+00	2232.00
IUUC-Mac-065398	Musa acuminata	50.25	0.00e+00	1181.00
IUUC-Mpu-066701	Mustela putorius furo	89.69	0.00e+00	2196.00
IUUC-Mlu-067392	Myotis lucifugus	88.11	0.00e+00	2199.00
IUUC-Nfi-068270	Neosartorya fischeri	54.82	0.00e+00	914.00
IUUC-Ncr-068892	Neurospora crassa	46.91	0.00e+00	1085.00
IUUC-Nle-069634	Nomascus leucogenys	90.80	0.00e+00	1233.00
IUUC-Opr-070952	Ochotona princeps	76.88	0.00e+00	1586.00
IUUC-Ont-072488	Oreochromis niloticus	83.91	0.00e+00	2083.00
IUUC-Oan-073184	Ornithorhynchus anatinus	43.77	8.00e-66	243.00
IUUC-Ocu-074211	Oryctolagus cuniculus	90.31	0.00e+00	2240.00
IUUC-Oba-075761	Oryza barthii	58.50	0.00e+00	995.00
IUUC-Obr-076429	Oryza brachyantha	58.50	0.00e+00	994.00
IUUC-Ogl-077364	Oryza glaberrima	58.50	0.00e+00	994.00
IUUC-Ogu-078257	Oryza glumaepatula	58.35	0.00e+00	994.00
IUUC-Oin-079274	Oryza indica	58.37	0.00e+00	993.00
IUUC-Olo-080466	Oryza longistaminata	58.35	0.00e+00	981.00
IUUC-Ome-081668	Oryza meridionalis	58.98	0.00e+00	859.00
IUUC-Oni-082874	Oryza nivara	58.62	0.00e+00	996.00
IUUC-Opu-083885	Oryza punctata	51.02	0.00e+00	1215.00
IUUC-Oru-084274	Oryza rufipogon	58.50	0.00e+00	994.00
IUUC-Osa-085565	Oryza sativa	58.50	0.00e+00	994.00
IUUC-Ola-086921	Oryzias latipes	82.60	0.00e+00	2056.00
IUUC-Olu-087639	Ostreococcus lucimarinus	53.68	0.00e+00	1249.00
IUUC-Oga-087991	Otolemur garnettii	85.02	0.00e+00	2097.00
IUUC-Oar-089590	Ovis aries	89.98	0.00e+00	2237.00
IUUC-Ptr-090808	Pan troglodytes	89.27	0.00e+00	2241.00
IUUC-Pan-092475	Papio anubis	89.81	0.00e+00	2237.00
IUUC-Psi-093044	Pelodiscus sinensis	77.19	0.00e+00	1627.00
IUUC-Pno-094839	Phaeosphaeria nodorum	45.63	0.00e+00	1036.00
IUUC-Ppa-095254	Physcomitrella patens	53.69	0.00e+00	1286.00
IUUC-Pfo-097493	Poecilia formosa	83.58	0.00e+00	2055.00
IUUC-Pab-098497	Pongo abelii	90.07	0.00e+00	2248.00
IUUC-Pop-099992	Populus trichocarpa	53.58	0.00e+00	1228.00
IUUC-Pca-100413	Procavia capensis	86.30	0.00e+00	910.00
IUUC-Ppe-101899	Prunus persica	52.39	0.00e+00	1217.00
IUUC-Pva-102126	Pteropus vampyrus	85.61	0.00e+00	2121.00
IUUC-Pgr-103376	Puccinia graminis	49.92	0.00e+00	1194.00
IUUC-Ptt-103978	Puccinia triticina	45.63	0.00e+00	995.00
IUUC-Pte-104126	Pyrenophora teres	54.70	0.00e+00	912.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	43.49	7.00e-158	551.00
IUUC-Rno-105428	Rattus norvegicus	89.98	0.00e+00	2230.00
IUUC-Sce-106464	Saccharomyces cerevisiae	41.85	0.00e+00	909.00
IUUC-Sha-107301	Sarcophilus harrisii	89.57	0.00e+00	2228.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	44.93	0.00e+00	1014.00
IUUC-Spo-108217	Schizosaccharomyces pombe	45.30	0.00e+00	1053.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	47.11	0.00e+00	1110.00
IUUC-Smo-109582	Selaginella moellendorffii	61.92	0.00e+00	1046.00
IUUC-Sit-109697	Setaria italica	58.37	0.00e+00	990.00
IUUC-Sly-111447	Solanum lycopersicum	52.52	0.00e+00	1252.00
IUUC-Stu-112564	Solanum tuberosum	52.10	0.00e+00	1245.00
IUUC-Sar-113313	Sorex araneus	77.84	0.00e+00	1291.00
IUUC-Sbi-114388	Sorghum bicolor	51.67	0.00e+00	1232.00
IUUC-Sre-115209	Sporisorium reilianum	55.09	0.00e+00	956.00
IUUC-Ssc-115933	Sus scrofa	90.07	0.00e+00	2237.00
IUUC-Tgu-117109	Taeniopygia guttata	74.07	9.00e-177	612.00
IUUC-Tru-117772	Takifugu rubripes	82.29	0.00e+00	2045.00
IUUC-Tsy-119105	Tarsius syrichta	76.83	0.00e+00	1871.00
IUUC-Tni-120556	Tetraodon nigroviridis	68.27	0.00e+00	1545.00
IUUC-Tca-121046	Theobroma cacao	52.38	0.00e+00	1274.00
IUUC-Tre-121951	Trichoderma reesei	47.35	0.00e+00	1099.00
IUUC-Tvi-122359	Trichoderma virens	47.16	0.00e+00	1105.00
IUUC-Tae-125527	Triticum aestivum	51.38	0.00e+00	1216.00
IUUC-Tur-126754	Triticum urartu	58.40	0.00e+00	994.00
IUUC-Tme-127170	Tuber melanosporum	48.45	0.00e+00	1147.00
IUUC-Tbe-127882	Tupaia belangeri	86.76	0.00e+00	740.00
IUUC-Ttr-128217	Tursiops truncatus	87.24	0.00e+00	2162.00
IUUC-Uma-129337	Ustilago maydis	55.07	0.00e+00	951.00
IUUC-Vda-129828	Verticillium dahliae	46.44	0.00e+00	1088.00
IUUC-Vpa-130537	Vicugna pacos	88.94	0.00e+00	2201.00
IUUC-Vvi-130958	Vitis vinifera	59.95	0.00e+00	1010.00
IUUC-Xma-133138	Xiphophorus maculatus	83.42	0.00e+00	2054.00
IUUC-Yli-134399	Yarrowia lipolytica	49.47	0.00e+00	796.00
IUUC-Zma-135612	Zea mays	51.67	0.00e+00	1239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence