iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016687

Ensembl Protein ID

Bra023615.1-P

UniProt Accession

M4E4B2; M4E4B2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023615	Bra023615.1	Bra023615.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-07	32.9	403	442

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvll 36
           gH +s t ++f   ++ ++l sG+ D+  ++W++++g ll
   Q: 403  GHVNSHTRIEFgidPSeRFLMSGGEDCCTRIWSIKSGQLL 442
           677888889999996669***************9999876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRPELPGFYF DEEKKKYFAI RGPIPGSKPS SSSSSSSRTK QKPDPKPLKE PNYQKRNKLK 60
ALKLLCSREL SGSVVLVNKK KSNFKEEIEK TQASNPLVWR YDSTENIGDA ALKEFQVDIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGACCAG GTCCCTAAAC CTCTTCCTCC TCAATAATTC TTCTATTTCC GATTACGTTC 60
CTGAGAATTA ATATGTTTTT TTTCTTTAAT TTGATTTCAG AGCTTCCTGG GTTTTATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	41.21	2.00e-38	152.00
IUUC-Aml-001929	Ailuropoda melanoleuca	31.68	2.00e-13	70.10
IUUC-Atr-002556	Amborella trichopoda	36.83	5.00e-76	278.00
IUUC-Apl-003177	Anas platyrhynchos	30.48	2.00e-16	79.70
IUUC-Aca-004610	Anolis carolinensis	31.72	2.00e-16	80.50
IUUC-Aly-005883	Arabidopsis lyrata	69.64	0.00e+00	642.00
IUUC-Ath-006668	Arabidopsis thaliana	67.65	0.00e+00	677.00
IUUC-Ame-010690	Astyanax mexicanus	31.07	3.00e-15	76.30
IUUC-Bta-012668	Bos taurus	31.68	9.00e-15	74.70
IUUC-Bdi-014848	Brachypodium distachyon	33.60	8.00e-58	217.00
IUUC-Bol-016035	Brassica oleracea	93.23	0.00e+00	892.00
IUUC-Cja-019560	Callithrix jacchus	36.78	5.00e-11	59.70
IUUC-Cfa-020441	Canis familiaris	31.68	2.00e-13	69.70
IUUC-Cpo-021299	Cavia porcellus	22.83	1.00e-15	77.80
IUUC-Csa-023185	Chlorocebus sabaeus	24.22	2.00e-18	86.70
IUUC-Cho-024353	Choloepus hoffmanni	24.78	3.00e-19	89.70
IUUC-Dno-029890	Dasypus novemcinctus	25.06	2.00e-18	86.70
IUUC-Eca-033466	Equus caballus	23.25	5.00e-17	82.00
IUUC-Eeu-034995	Erinaceus europaeus	31.68	1.00e-13	70.10
IUUC-Fca-036199	Felis catus	31.68	3.00e-13	69.70
IUUC-Fal-036717	Ficedula albicollis	29.57	7.00e-16	78.20
IUUC-Gmo-039201	Gadus morhua	30.19	4.00e-13	69.30
IUUC-Gga-040398	Gallus gallus	31.28	4.00e-16	79.30
IUUC-Gac-042391	Gasterosteus aculeatus	26.94	4.00e-23	102.00
IUUC-Gma-043880	Glycine max	43.35	3.00e-98	352.00
IUUC-Ggo-045348	Gorilla gorilla	24.22	5.00e-18	85.50
IUUC-Hsa-046746	Homo sapiens	24.22	4.00e-18	85.50
IUUC-Hvu-047825	Hordeum vulgare	33.71	2.00e-55	209.00
IUUC-Itr-048472	Ictidomys tridecemlineatus	31.06	7.00e-14	71.60
IUUC-Lch-050272	Latimeria chalumnae	29.53	1.00e-13	70.90
IUUC-Lpe-051618	Leersia perrieri	33.33	3.00e-67	249.00
IUUC-Loc-051772	Lepisosteus oculatus	35.11	4.00e-20	92.40
IUUC-Laf-054577	Loxodonta africana	27.55	4.00e-12	65.90
IUUC-Mcc-055284	Macaca mulatta	31.43	2.00e-14	72.80
IUUC-Mtr-058472	Medicago truncatula	43.33	2.00e-93	335.00
IUUC-Mga-059238	Meleagris gallopavo	31.84	1.00e-16	81.30
IUUC-Mmr-061642	Microcebus murinus	29.71	3.00e-12	65.90
IUUC-Mdo-062030	Monodelphis domestica	32.96	7.00e-15	75.10
IUUC-Mmu-063420	Mus musculus	31.43	1.00e-14	74.70
IUUC-Mac-065231	Musa acuminata	35.29	5.00e-78	285.00
IUUC-Mpu-065692	Mustela putorius furo	31.68	2.00e-13	70.10
IUUC-Mlu-067428	Myotis lucifugus	31.68	1.00e-13	70.90
IUUC-Nle-070145	Nomascus leucogenys	24.22	7.00e-18	85.10
IUUC-Opr-071081	Ochotona princeps	32.92	2.00e-13	70.10
IUUC-Ont-071302	Oreochromis niloticus	31.68	5.00e-16	79.00
IUUC-Ocu-073925	Oryctolagus cuniculus	23.49	4.00e-14	72.40
IUUC-Oba-075797	Oryza barthii	33.02	9.00e-61	227.00
IUUC-Obr-076014	Oryza brachyantha	33.65	2.00e-66	246.00
IUUC-Ogl-077201	Oryza glaberrima	40.55	2.00e-45	176.00
IUUC-Ogu-078056	Oryza glumaepatula	33.02	4.00e-61	228.00
IUUC-Oin-080062	Oryza indica	35.53	2.00e-65	242.00
IUUC-Olo-080869	Oryza longistaminata	35.33	1.00e-59	224.00
IUUC-Ome-081820	Oryza meridionalis	33.65	5.00e-67	248.00
IUUC-Oni-082497	Oryza nivara	34.06	3.00e-62	232.00
IUUC-Opu-083780	Oryza punctata	34.80	8.00e-31	129.00
IUUC-Oru-085091	Oryza rufipogon	33.59	6.00e-64	238.00
IUUC-Osa-085725	Oryza sativa	33.59	6.00e-64	238.00
IUUC-Ola-087033	Oryzias latipes	33.16	2.00e-16	80.50
IUUC-Oga-088861	Otolemur garnettii	23.87	2.00e-18	86.70
IUUC-Oar-090048	Ovis aries	31.68	3.00e-14	73.20
IUUC-Ptr-091658	Pan troglodytes	24.22	5.00e-18	85.50
IUUC-Pan-092570	Papio anubis	31.43	6.00e-14	71.60
IUUC-Psi-093421	Pelodiscus sinensis	30.11	1.00e-15	77.80
IUUC-Pma-094216	Petromyzon marinus	28.12	4.00e-11	62.00
IUUC-Ppa-095186	Physcomitrella patens	28.05	2.00e-47	182.00
IUUC-Pfo-096178	Poecilia formosa	29.70	2.00e-13	70.50
IUUC-Pab-098465	Pongo abelii	41.38	9.00e-14	71.20
IUUC-Pop-099334	Populus trichocarpa	52.94	9.00e-59	219.00
IUUC-Pca-100845	Procavia capensis	32.00	1.00e-13	71.20
IUUC-Pva-103203	Pteropus vampyrus	23.02	1.00e-15	77.40
IUUC-Rno-105675	Rattus norvegicus	32.30	6.00e-15	75.50
IUUC-Sha-107389	Sarcophilus harrisii	31.06	1.00e-13	71.20
IUUC-Sja-107847	Schizosaccharomyces japonicus	21.29	2.00e-07	50.40
IUUC-Sit-110421	Setaria italica	41.60	1.00e-47	183.00
IUUC-Sly-110888	Solanum lycopersicum	39.81	1.00e-86	313.00
IUUC-Sbi-114182	Sorghum bicolor	40.67	3.00e-34	137.00
IUUC-Ssc-116005	Sus scrofa	32.92	4.00e-14	72.40
IUUC-Tgu-117023	Taeniopygia guttata	29.03	4.00e-13	68.90
IUUC-Tru-118221	Takifugu rubripes	32.00	9.00e-17	81.30
IUUC-Tsy-118784	Tarsius syrichta	29.71	3.00e-13	68.90
IUUC-Tni-120072	Tetraodon nigroviridis	31.52	4.00e-16	79.30
IUUC-Tca-121267	Theobroma cacao	41.43	1.00e-98	353.00
IUUC-Tae-124867	Triticum aestivum	34.26	6.00e-60	224.00
IUUC-Tur-126655	Triticum urartu	41.27	1.00e-42	166.00
IUUC-Tbe-127243	Tupaia belangeri	40.23	8.00e-10	58.20
IUUC-Ttr-129237	Tursiops truncatus	32.30	3.00e-14	73.20
IUUC-Vvi-131184	Vitis vinifera	45.35	2.00e-111	395.00
IUUC-Xtr-132006	Xenopus tropicalis	27.57	5.00e-14	72.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence