iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006124

Ensembl Protein ID

fgenesh2_kg.3__850__AT3G08505.2

UniProt Accession

D7L749; D7L749_ARALL

Genbank Protein ID

EFH60940.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_478149

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__850__AT3G08505.2	fgenesh2_kg.3__850__AT3G08505.2	fgenesh2_kg.3__850__AT3G08505.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	29.3	169	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdg.plvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C++Cl+++        +    l++ C H f+ +C+ +w     +  +++ s+   CP+Cr
   Q: 169  CSVCLDRIlskatpgeR-KfGLLTECDHPFCIQCIRNWrssapVSGMDVNSTLRACPICR 227
           9******9988777642.2355699**********************************8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSDRILCKFF VHGSCLKGEN CEFSHDSKDP PNNVCTFYQK GICLYGSRCR YDHVRAASNV 60
PLSLDSESLD RSISTTPSRN LQQQGTPDGD KSPNVHCIHP REYPICSFAA AGDCPRGNQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACAAATTCA ATTTCTTCAC ATAAAGCTCT CTCTTCCTTG TCATTCTTCA AACTTTGAAT 60
CTTTTTTCTC TCCGCACAAT CCCCAAATGT CCGATAGGTA TCCCCAACTT CTCGATCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4
PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_478149

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000297	Aegilops tauschii	61.70	2.00e-66	246.00
IUUC-Aml-001937	Ailuropoda melanoleuca	40.70	1.00e-41	163.00
IUUC-Apl-004110	Anas platyrhynchos	40.70	4.00e-41	161.00
IUUC-Aca-005385	Anolis carolinensis	33.15	4.00e-52	198.00
IUUC-Ath-006918	Arabidopsis thaliana	95.98	5.00e-166	575.00
IUUC-Ame-011246	Astyanax mexicanus	34.53	1.00e-53	202.00
IUUC-Bta-012318	Bos taurus	32.29	3.00e-52	198.00
IUUC-Bol-016162	Brassica oleracea	78.82	7.00e-134	469.00
IUUC-Bra-018102	Brassica rapa	78.82	3.00e-134	470.00
IUUC-Cja-019550	Callithrix jacchus	38.64	2.00e-42	165.00
IUUC-Cfa-020166	Canis familiaris	32.76	8.00e-53	200.00
IUUC-Cpo-021887	Cavia porcellus	32.29	3.00e-51	195.00
IUUC-Cre-022707	Chlamydomonas reinhardtii	39.81	9.00e-65	239.00
IUUC-Csa-023930	Chlorocebus sabaeus	32.28	1.00e-50	192.00
IUUC-Cho-024307	Choloepus hoffmanni	31.65	6.00e-53	201.00
IUUC-Csv-026322	Ciona savignyi	32.87	2.00e-56	212.00
IUUC-Dre-027762	Danio rerio	34.71	2.00e-56	212.00
IUUC-Dno-029666	Dasypus novemcinctus	32.40	3.00e-53	201.00
IUUC-Dor-030133	Dipodomys ordii	42.14	1.00e-28	119.00
IUUC-Dme-031705	Drosophila melanogaster	42.02	2.00e-37	149.00
IUUC-Ete-032356	Echinops telfairi	40.37	6.00e-22	97.10
IUUC-Eca-033340	Equus caballus	32.29	7.00e-52	197.00
IUUC-Eeu-035167	Erinaceus europaeus	38.18	1.00e-41	162.00
IUUC-Fca-035536	Felis catus	32.95	4.00e-52	197.00
IUUC-Fal-036881	Ficedula albicollis	33.43	9.00e-51	193.00
IUUC-Gmo-039495	Gadus morhua	41.84	3.00e-46	178.00
IUUC-Gga-041148	Gallus gallus	33.82	7.00e-50	190.00
IUUC-Gac-041790	Gasterosteus aculeatus	34.82	5.00e-58	218.00
IUUC-Ggo-045245	Gorilla gorilla	31.93	3.00e-53	202.00
IUUC-Hsa-046589	Homo sapiens	31.93	3.00e-53	202.00
IUUC-Itr-048468	Ictidomys tridecemlineatus	41.43	9.00e-29	119.00
IUUC-Lch-049777	Latimeria chalumnae	31.64	1.00e-53	203.00
IUUC-Loc-052281	Lepisosteus oculatus	33.91	4.00e-57	214.00
IUUC-Mcc-055160	Macaca mulatta	32.38	1.00e-51	196.00
IUUC-Mla-059005	Melampsora laricipopulina	33.02	3.00e-22	99.80
IUUC-Mmr-061574	Microcebus murinus	32.21	9.00e-54	203.00
IUUC-Mdo-061974	Monodelphis domestica	32.30	1.00e-52	200.00
IUUC-Mmu-063887	Mus musculus	32.49	2.00e-52	199.00
IUUC-Mpu-066756	Mustela putorius furo	40.70	2.00e-41	162.00
IUUC-Mlu-067691	Myotis lucifugus	33.52	1.00e-51	196.00
IUUC-Nle-069845	Nomascus leucogenys	31.93	4.00e-53	201.00
IUUC-Opr-070262	Ochotona princeps	31.37	4.00e-52	197.00
IUUC-Ont-071561	Oreochromis niloticus	35.95	8.00e-58	216.00
IUUC-Ocu-074869	Oryctolagus cuniculus	30.34	3.00e-39	155.00
IUUC-Ola-086506	Oryzias latipes	36.67	2.00e-58	218.00
IUUC-Oga-088871	Otolemur garnettii	33.05	2.00e-53	202.00
IUUC-Oar-090436	Ovis aries	40.70	9.00e-42	163.00
IUUC-Ptr-091519	Pan troglodytes	31.93	4.00e-53	201.00
IUUC-Pan-092582	Papio anubis	31.58	1.00e-51	196.00
IUUC-Psi-093168	Pelodiscus sinensis	33.53	3.00e-50	191.00
IUUC-Pfo-096075	Poecilia formosa	33.92	4.00e-56	211.00
IUUC-Pab-098764	Pongo abelii	32.28	1.00e-50	192.00
IUUC-Pca-100903	Procavia capensis	33.81	1.00e-56	213.00
IUUC-Pva-103124	Pteropus vampyrus	29.39	8.00e-41	160.00
IUUC-Rno-104976	Rattus norvegicus	32.77	3.00e-53	202.00
IUUC-Sha-107572	Sarcophilus harrisii	32.67	1.00e-50	192.00
IUUC-Smo-109483	Selaginella moellendorffii	53.31	4.00e-99	353.00
IUUC-Sar-113068	Sorex araneus	32.56	4.00e-51	194.00
IUUC-Ssc-115272	Sus scrofa	31.93	5.00e-53	201.00
IUUC-Tgu-116537	Taeniopygia guttata	31.52	3.00e-49	188.00
IUUC-Tru-118205	Takifugu rubripes	33.62	2.00e-55	208.00
IUUC-Tsy-118929	Tarsius syrichta	40.70	2.00e-41	162.00
IUUC-Tni-120744	Tetraodon nigroviridis	34.12	2.00e-56	212.00
IUUC-Tur-126806	Triticum urartu	49.83	3.00e-73	268.00
IUUC-Tbe-128131	Tupaia belangeri	30.21	4.00e-40	157.00
IUUC-Ttr-129099	Tursiops truncatus	32.21	2.00e-53	202.00
IUUC-Vpa-130663	Vicugna pacos	36.25	7.00e-30	124.00
IUUC-Xtr-132036	Xenopus tropicalis	42.41	2.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence