iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000011054.3	ENSCPOT00000025710.1	ENSCPOP00000014336.1
ENSCPOG00000011054.3	ENSCPOT00000011156.2	ENSCPOP00000009936.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-12	47.3	340	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf....sdtllvsGsdDgtikvWDlrtgv 34
           ++sv +++f    + +l+v G++ g+i +WD r+++
   Q: 340  QSSVMSVCFarfhP-NLVVGGTYSGQIVLWDNRSHR 374
           57899999999754.9999999*********98875 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MSDKSDLKAE LERKKQRLAQ IREEKKRKEE ERKKKEADLQ QKKEPVQDDS DLDRKRRETE 60
ALLQSIGISP EPPLVQPLHF LTWDTCYFHY LVPTPMSPSS KSVSTPSEAG SQDSGDLGPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGACA AAAGTGACTT AAAAGCTGAG CTTGAGCGCA AAAAACAGCG CTTAGCACAG 60
ATAAGAGAAG AGAAGAAACG GAAGGAAGAG GAGAGGAAAA AGAAGGAGGT AAATACTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0036464--C:cytoplasmic ribonucleoprotein granule
GO:0000776--C:kinetochore
GO:0005634--C:nucleus
GO:0055037--C:recycling endosome
GO:0000922--C:spindle pole
GO:0047496--P:vesicle transport along microtubule

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001500	Ailuropoda melanoleuca	98.08	0.00e+00	976.00
IUUC-Cja-018913	Callithrix jacchus	98.65	0.00e+00	982.00
IUUC-Cfa-020794	Canis familiaris	95.00	0.00e+00	931.00
IUUC-Csa-023506	Chlorocebus sabaeus	95.58	0.00e+00	935.00
IUUC-Cho-025102	Choloepus hoffmanni	80.96	0.00e+00	754.00
IUUC-Dor-030613	Dipodomys ordii	98.27	0.00e+00	975.00
IUUC-Ete-032322	Echinops telfairi	88.32	0.00e+00	771.00
IUUC-Eca-033324	Equus caballus	98.65	0.00e+00	983.00
IUUC-Ggo-045363	Gorilla gorilla	98.65	0.00e+00	981.00
IUUC-Hsa-046861	Homo sapiens	98.65	0.00e+00	981.00
IUUC-Laf-053494	Loxodonta africana	98.46	0.00e+00	984.00
IUUC-Mcc-055731	Macaca mulatta	99.04	0.00e+00	986.00
IUUC-Mga-059796	Meleagris gallopavo	95.38	0.00e+00	953.00
IUUC-Mmr-060828	Microcebus murinus	98.46	0.00e+00	981.00
IUUC-Mmu-063862	Mus musculus	98.08	0.00e+00	977.00
IUUC-Mpu-066835	Mustela putorius furo	95.00	0.00e+00	930.00
IUUC-Mlu-067993	Myotis lucifugus	96.95	0.00e+00	967.00
IUUC-Nle-069711	Nomascus leucogenys	98.85	0.00e+00	984.00
IUUC-Opr-070509	Ochotona princeps	97.52	0.00e+00	936.00
IUUC-Ocu-074398	Oryctolagus cuniculus	95.00	0.00e+00	930.00
IUUC-Oar-090454	Ovis aries	94.23	0.00e+00	921.00
IUUC-Ptr-090850	Pan troglodytes	98.65	0.00e+00	981.00
IUUC-Pan-092449	Papio anubis	95.58	0.00e+00	935.00
IUUC-Pab-098252	Pongo abelii	98.65	0.00e+00	981.00
IUUC-Pva-102223	Pteropus vampyrus	91.73	0.00e+00	890.00
IUUC-Rno-105683	Rattus norvegicus	97.69	0.00e+00	965.00
IUUC-Tgu-117310	Taeniopygia guttata	95.98	0.00e+00	793.00
IUUC-Tsy-119423	Tarsius syrichta	89.62	0.00e+00	835.00
IUUC-Ttr-129188	Tursiops truncatus	98.46	0.00e+00	981.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence