iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
miRNAMap	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-09	36.2	89	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWD 29
           H d +t +    +++++++s+Dg +k W 
   Q: 89   HRDVITHVVCtKTDFIITASHDGHVKFWK 117
           788888875543389*************7 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAAEIGSDSQ LKRRRRRDPE GSEKTELSER EPALAVEGRE ENDDENEERW VGPLPVEATL 60
AKKRKVLEFE RVYLENLPSA SMYERSYMHR DVITHVVCTK TDFIITASHD GHVKFWKKIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGTTGCT GATTGGATCG GCGGGGCCCA CCGTAGCAAA TCAGAATATG CGCCCAGCCG 60
TGACAACAAA ATACTGCGCC GCAGATCGGG AAACAGAGTT CACTCGGTTG TCGCATCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0413--Isomerase
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR029000--Cyclophilin-like_dom
IPR024936--Cyclophilin-type_PPIase
IPR002130--Cyclophilin-type_PPIase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50072--CSA_PPIASE_2
PS50294--WD_REPEATS_REGION

Pfam

PF00160--Pro_isomerase
PF00400--WD40

PRINTS

PR00153--CSAPPISMRASE

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0016604--C:nuclear body
GO:0003755--F:peptidyl-prolyl cis-trans isomerase activity
GO:0006457--P:protein folding

KEGG

rno:294711

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000971	Aegilops tauschii	52.19	6.00e-177	613.00
IUUC-Aml-001897	Ailuropoda melanoleuca	96.59	0.00e+00	1274.00
IUUC-Apl-003599	Anas platyrhynchos	93.69	0.00e+00	1160.00
IUUC-Aca-004814	Anolis carolinensis	93.47	0.00e+00	1196.00
IUUC-Aly-005546	Arabidopsis lyrata	54.15	0.00e+00	655.00
IUUC-Acl-008086	Aspergillus clavatus	48.34	4.00e-160	558.00
IUUC-Afu-008839	Aspergillus fumigatus	48.58	8.00e-159	553.00
IUUC-Ani-009162	Aspergillus nidulans	50.08	2.00e-159	555.00
IUUC-Ang-009524	Aspergillus niger	49.83	4.00e-167	581.00
IUUC-Ate-010284	Aspergillus terreus	48.93	4.00e-163	568.00
IUUC-Ame-011100	Astyanax mexicanus	84.67	0.00e+00	988.00
IUUC-Bgr-012307	Blumeria graminis	42.20	4.00e-86	311.00
IUUC-Bta-012821	Bos taurus	96.28	0.00e+00	1268.00
IUUC-Bci-013978	Botrytis cinerea	48.42	2.00e-164	572.00
IUUC-Bdi-014828	Brachypodium distachyon	52.16	0.00e+00	645.00
IUUC-Cja-018769	Callithrix jacchus	96.44	0.00e+00	1249.00
IUUC-Cfa-020555	Canis familiaris	95.98	0.00e+00	1246.00
IUUC-Cpo-022169	Cavia porcellus	95.51	0.00e+00	1250.00
IUUC-Cre-022808	Chlamydomonas reinhardtii	48.93	1.00e-138	486.00
IUUC-Csa-023086	Chlorocebus sabaeus	96.59	0.00e+00	1249.00
IUUC-Cin-025611	Ciona intestinalis	62.62	0.00e+00	778.00
IUUC-Csv-026237	Ciona savignyi	57.12	0.00e+00	726.00
IUUC-Cgl-026661	Colletotrichum gloeosporioides	49.09	3.00e-167	582.00
IUUC-Dre-028591	Danio rerio	85.62	0.00e+00	1111.00
IUUC-Dno-029074	Dasypus novemcinctus	93.83	0.00e+00	1230.00
IUUC-Dor-030544	Dipodomys ordii	87.77	0.00e+00	1091.00
IUUC-Dse-031430	Dothistroma septosporum	48.76	3.00e-162	565.00
IUUC-Dme-031943	Drosophila melanogaster	60.54	0.00e+00	761.00
IUUC-Eca-034176	Equus caballus	96.28	0.00e+00	1250.00
IUUC-Fca-036583	Felis catus	96.13	0.00e+00	1268.00
IUUC-Fal-037662	Ficedula albicollis	95.04	0.00e+00	1147.00
IUUC-Fox-037831	Fusarium oxysporum	46.37	7.00e-152	530.00
IUUC-Fso-038360	Fusarium solani	46.93	3.00e-151	528.00
IUUC-Gmo-039705	Gadus morhua	83.19	0.00e+00	1063.00
IUUC-Ggr-040077	Gaeumannomyces graminis	47.85	3.00e-159	555.00
IUUC-Gga-040138	Gallus gallus	93.97	0.00e+00	1196.00
IUUC-Gac-042647	Gasterosteus aculeatus	83.78	0.00e+00	1083.00
IUUC-Ggo-045218	Gorilla gorilla	96.90	0.00e+00	1278.00
IUUC-Hsa-045940	Homo sapiens	96.59	0.00e+00	1276.00
IUUC-Hvu-047090	Hordeum vulgare	52.20	0.00e+00	629.00
IUUC-Itr-048024	Ictidomys tridecemlineatus	97.06	0.00e+00	1281.00
IUUC-Lch-049614	Latimeria chalumnae	87.77	0.00e+00	1133.00
IUUC-Lpe-051688	Leersia perrieri	53.07	0.00e+00	651.00
IUUC-Loc-051834	Lepisosteus oculatus	86.62	0.00e+00	1113.00
IUUC-Lma-052989	Leptosphaeria maculans	47.78	3.00e-152	531.00
IUUC-Laf-054056	Loxodonta africana	96.28	0.00e+00	1266.00
IUUC-Mcc-055891	Macaca mulatta	96.90	0.00e+00	1255.00
IUUC-Meu-056503	Macropus eugenii	90.62	0.00e+00	1130.00
IUUC-Mor-057121	Magnaporthe oryzae	47.77	2.00e-159	555.00
IUUC-Mpo-057304	Magnaporthe poae	47.69	3.00e-161	561.00
IUUC-Mmr-061049	Microcebus murinus	96.13	0.00e+00	1253.00
IUUC-Mdo-062399	Monodelphis domestica	96.10	0.00e+00	1236.00
IUUC-Mmu-063093	Mus musculus	98.45	0.00e+00	1297.00
IUUC-Mpu-066077	Mustela putorius furo	96.59	0.00e+00	1276.00
IUUC-Mlu-066977	Myotis lucifugus	95.67	0.00e+00	1254.00
IUUC-Nfi-068247	Neosartorya fischeri	48.75	7.00e-160	557.00
IUUC-Ncr-068924	Neurospora crassa	48.12	8.00e-159	553.00
IUUC-Nle-069866	Nomascus leucogenys	96.59	0.00e+00	1248.00
IUUC-Opr-071094	Ochotona princeps	90.25	0.00e+00	1165.00
IUUC-Ont-071762	Oreochromis niloticus	85.62	0.00e+00	1106.00
IUUC-Oan-073117	Ornithorhynchus anatinus	81.46	0.00e+00	986.00
IUUC-Ocu-074295	Oryctolagus cuniculus	96.28	0.00e+00	1279.00
IUUC-Obr-076638	Oryza brachyantha	52.03	0.00e+00	639.00
IUUC-Ogl-077801	Oryza glaberrima	52.81	0.00e+00	639.00
IUUC-Oin-079614	Oryza indica	46.02	4.00e-105	375.00
IUUC-Opu-083158	Oryza punctata	51.71	0.00e+00	641.00
IUUC-Ola-087124	Oryzias latipes	80.47	0.00e+00	1102.00
IUUC-Olu-087758	Ostreococcus lucimarinus	49.75	1.00e-166	580.00
IUUC-Oga-088254	Otolemur garnettii	95.98	0.00e+00	1280.00
IUUC-Oar-089414	Ovis aries	96.44	0.00e+00	1270.00
IUUC-Ptr-091471	Pan troglodytes	96.75	0.00e+00	1276.00
IUUC-Pan-091762	Papio anubis	96.75	0.00e+00	1251.00
IUUC-Psi-093822	Pelodiscus sinensis	90.03	0.00e+00	1194.00
IUUC-Pma-094613	Petromyzon marinus	74.19	2.00e-155	542.00
IUUC-Ppa-095551	Physcomitrella patens	50.91	0.00e+00	628.00
IUUC-Pfo-096544	Poecilia formosa	86.12	0.00e+00	1106.00
IUUC-Pab-098657	Pongo abelii	96.28	0.00e+00	1271.00
IUUC-Pca-100456	Procavia capensis	95.36	0.00e+00	1257.00
IUUC-Pte-104062	Pyrenophora teres	47.11	3.00e-154	538.00
IUUC-Sha-106972	Sarcophilus harrisii	97.70	0.00e+00	1170.00
IUUC-Sja-107835	Schizosaccharomyces japonicus	40.83	2.00e-124	439.00
IUUC-Spo-108123	Schizosaccharomyces pombe	40.80	9.00e-121	427.00
IUUC-Smo-109088	Selaginella moellendorffii	53.59	0.00e+00	654.00
IUUC-Sit-110058	Setaria italica	51.74	0.00e+00	642.00
IUUC-Sbi-114363	Sorghum bicolor	51.24	0.00e+00	639.00
IUUC-Ssc-115357	Sus scrofa	96.44	0.00e+00	1267.00
IUUC-Tgu-116509	Taeniopygia guttata	94.14	0.00e+00	1199.00
IUUC-Tru-117813	Takifugu rubripes	83.28	0.00e+00	1074.00
IUUC-Tre-122148	Trichoderma reesei	48.26	4.00e-157	548.00
IUUC-Tvi-122519	Trichoderma virens	47.76	2.00e-156	545.00
IUUC-Tae-124690	Triticum aestivum	51.86	0.00e+00	637.00
IUUC-Tur-126759	Triticum urartu	52.03	0.00e+00	640.00
IUUC-Tme-127094	Tuber melanosporum	48.29	1.00e-151	530.00
IUUC-Tbe-128038	Tupaia belangeri	94.74	0.00e+00	1264.00
IUUC-Ttr-128520	Tursiops truncatus	85.45	0.00e+00	1100.00
IUUC-Vda-129717	Verticillium dahliae	48.09	4.00e-159	555.00
IUUC-Vpa-130129	Vicugna pacos	95.98	0.00e+00	1259.00
IUUC-Xtr-131757	Xenopus tropicalis	87.77	0.00e+00	1131.00
IUUC-Xma-133563	Xiphophorus maculatus	86.05	0.00e+00	1100.00
IUUC-Zma-135633	Zea mays	48.89	3.00e-179	621.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence