iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006407

Ensembl Protein ID

scaffold_604224.1

UniProt Accession

D7M5K9; D7M5K9_ARALL

Genbank Protein ID

EFH49190.1

Protein Name

UBX domain-containing protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_912167

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_604224.1	scaffold_604224.1	scaffold_604224.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	1.40e-07	32.7	389	461

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 3    teqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsg 75
           +++ tl +R+pd +r  r+F +s++l+ +++f++ +   +  ++  v+p+Prr ++ ++   t +e+ L+++ 
   Q: 389  EDAITLLVRMPDSSRHGRRFLKSDKLQYLFDFIDAAGLVKPGTYRVVRPYPRRAFSLQDGALTFEELSLTNKQ 461
           5678999***************************999999999**************************9974 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVIPTRDAIQ SYMSITGASE SLAIQRLEEH GNNLPEAINS HFRDVERSIY DDSSLETRSD 60
YNVVEDNNHV RGIETRPVNE PRPVPGALPS ILSAARAFRP SLLLDPNYRR NIFRQLSGSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCACCGATT TCTCCGGCGG AAATGGTCAT TCCGACGAGA GACGCTATCC AATCTTACAT 60
GAGCATCACT GGCGCGTCCG AGTCACTAGC GATTCAGCGA CTTGAGGTTC TTTCTTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom
IPR003903--UIM_dom

PROSITE

PS50033--UBX
PS50330--UIM

Pfam

PF00789--UBX
PF02809--UIM

SMART

SM00166--UBX
SM00726--UIM

KEGG

aly:ARALYDRAFT_912167

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007028	Arabidopsis thaliana	91.04	0.00e+00	816.00
IUUC-Bci-013928	Botrytis cinerea	32.20	1.00e-02	35.00
IUUC-Bol-015655	Brassica oleracea	76.31	9.00e-177	612.00
IUUC-Bra-017914	Brassica rapa	75.62	8.00e-177	612.00
IUUC-Mvi-060313	Microbotryum violaceum	33.93	2.10e-01	29.30
IUUC-Ocu-073802	Oryctolagus cuniculus	29.63	7.00e-05	40.40
IUUC-Pma-094190	Petromyzon marinus	39.19	1.00e-05	40.80
IUUC-Pop-099719	Populus trichocarpa	36.53	2.00e-71	262.00
IUUC-Rno-105965	Rattus norvegicus	31.15	1.00e-06	46.20
IUUC-Ssl-108499	Sclerotinia sclerotiorum	33.90	2.00e-03	37.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence