iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135241

Ensembl Protein ID

Zm00001d019200_T001

UniProt Accession

B6TSA2; B6TSA2_MAIZE

Genbank Protein ID

ACG39985.1; ONM52466.1

Protein Name

Small nucleolar ribonucleoprotein complex subunit

Genbank Nucleotide ID

EU967867; CM007650

Gene Name

ZEAMMB73_Zm00001d019200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d019200	Zm00001d019200_T001	Zm00001d019200_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-12	47.8	183	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtc.laf..sd.tllvsGsdDgtikvWDlrt 32
           H+d +++       d +++++Gs+D ++k+WD rt
   Q: 183  HQDYIRGgA-AspADhNIFATGSYDRSVKLWDART 216
           666666632.23445599**************877 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAADTSKPFF PAAPHSALRP SRSAASRAFP ESSYWRAFRS SELVSDAGFP VTDLTFASSV 60
EDRAAPTLAA SWSTSVHVFS SDPLEKLRRI SVAGDLAFSP SFRCDGALLA TGDKKGVVRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCTG ACACTTCGAA GCCCTTCTTC CCGGCGGCGC CGCACTCGGC TCTCCGCCCC 60
TCCAGGAGCG CCGCCTCGCG CGCGTTCCCT GAGAGCTCCT ACTGGCGCGC CTTCCGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0005730--C:nucleolus
GO:0019013--C:viral nucleocapsid
GO:0009561--P:megagametogenesis
GO:0006364--P:rRNA processing

KEGG

zma:100284315

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002117	Ailuropoda melanoleuca	29.69	5.00e-51	194.00
IUUC-Atr-003068	Amborella trichopoda	45.80	5.00e-102	364.00
IUUC-Apl-003926	Anas platyrhynchos	32.14	1.00e-59	223.00
IUUC-Aca-004271	Anolis carolinensis	30.87	3.00e-52	199.00
IUUC-Aly-005525	Arabidopsis lyrata	44.53	2.00e-112	399.00
IUUC-Ath-006954	Arabidopsis thaliana	44.26	6.00e-110	390.00
IUUC-Ago-007973	Ashbya gossypii	28.77	1.00e-36	147.00
IUUC-Acl-008287	Aspergillus clavatus	27.34	1.00e-31	130.00
IUUC-Afl-008504	Aspergillus flavus	26.42	2.00e-38	153.00
IUUC-Afu-008983	Aspergillus fumigatus	29.08	3.00e-28	119.00
IUUC-Ani-009315	Aspergillus nidulans	25.77	1.00e-30	127.00
IUUC-Ang-009690	Aspergillus niger	27.67	9.00e-41	160.00
IUUC-Aor-010181	Aspergillus oryzae	26.42	2.00e-38	153.00
IUUC-Ate-010498	Aspergillus terreus	26.35	5.00e-38	152.00
IUUC-Ame-011814	Astyanax mexicanus	31.75	1.00e-52	200.00
IUUC-Bgr-012273	Blumeria graminis	25.90	2.00e-35	143.00
IUUC-Bta-013068	Bos taurus	30.14	5.00e-53	201.00
IUUC-Bci-013930	Botrytis cinerea	26.74	1.00e-43	171.00
IUUC-Bdi-014876	Brachypodium distachyon	75.09	0.00e+00	783.00
IUUC-Bol-015366	Brassica oleracea	46.80	8.00e-115	406.00
IUUC-Bra-017589	Brassica rapa	46.50	6.00e-110	390.00
IUUC-Cel-018159	Caenorhabditis elegans	29.05	2.00e-34	140.00
IUUC-Cja-019139	Callithrix jacchus	30.08	1.00e-51	197.00
IUUC-Cfa-020742	Canis familiaris	28.96	2.00e-48	186.00
IUUC-Cpo-021707	Cavia porcellus	30.86	2.00e-54	206.00
IUUC-Cre-022665	Chlamydomonas reinhardtii	33.60	6.00e-58	218.00
IUUC-Csa-023024	Chlorocebus sabaeus	29.75	2.00e-51	196.00
IUUC-Cho-024487	Choloepus hoffmanni	32.92	6.00e-35	141.00
IUUC-Cin-025294	Ciona intestinalis	31.96	4.00e-58	218.00
IUUC-Cgl-026388	Colletotrichum gloeosporioides	28.28	6.00e-20	91.70
IUUC-Cne-026945	Cryptococcus neoformans	27.08	5.00e-35	141.00
IUUC-Cme-027108	Cyanidioschyzon merolae	27.10	2.00e-31	129.00
IUUC-Dre-028316	Danio rerio	29.39	4.00e-52	198.00
IUUC-Dno-028985	Dasypus novemcinctus	29.16	2.00e-50	192.00
IUUC-Dor-030219	Dipodomys ordii	26.09	2.00e-23	103.00
IUUC-Dse-031495	Dothistroma septosporum	29.05	2.00e-29	123.00
IUUC-Dme-031769	Drosophila melanogaster	28.30	3.00e-40	159.00
IUUC-Ete-032630	Echinops telfairi	34.57	4.00e-39	155.00
IUUC-Eca-033816	Equus caballus	29.94	7.00e-53	201.00
IUUC-Eeu-034840	Erinaceus europaeus	39.02	5.00e-38	151.00
IUUC-Fca-035751	Felis catus	29.94	2.00e-52	199.00
IUUC-Fal-036733	Ficedula albicollis	31.79	8.00e-63	234.00
IUUC-Fox-037743	Fusarium oxysporum	30.64	3.00e-35	142.00
IUUC-Fso-038395	Fusarium solani	31.27	1.00e-33	137.00
IUUC-Gmo-038803	Gadus morhua	31.04	3.00e-52	199.00
IUUC-Ggr-040092	Gaeumannomyces graminis	32.48	2.00e-33	136.00
IUUC-Gga-040714	Gallus gallus	30.72	6.00e-61	228.00
IUUC-Gac-042640	Gasterosteus aculeatus	30.29	2.00e-56	213.00
IUUC-Gma-043711	Glycine max	47.31	1.00e-104	373.00
IUUC-Ggo-045616	Gorilla gorilla	29.75	2.00e-52	199.00
IUUC-Hsa-046720	Homo sapiens	31.50	6.00e-52	198.00
IUUC-Itr-048796	Ictidomys tridecemlineatus	30.53	1.00e-53	203.00
IUUC-Kpa-049291	Komagataella pastoris	29.11	1.00e-42	166.00
IUUC-Lch-049729	Latimeria chalumnae	31.18	6.00e-54	204.00
IUUC-Lpe-051141	Leersia perrieri	74.03	0.00e+00	762.00
IUUC-Loc-051756	Lepisosteus oculatus	30.57	2.00e-58	219.00
IUUC-Lma-053083	Leptosphaeria maculans	32.31	3.00e-32	132.00
IUUC-Laf-054067	Loxodonta africana	29.47	3.00e-50	192.00
IUUC-Mcc-055096	Macaca mulatta	29.75	2.00e-51	196.00
IUUC-Meu-056604	Macropus eugenii	30.87	3.00e-45	176.00
IUUC-Mor-057186	Magnaporthe oryzae	28.12	1.00e-41	164.00
IUUC-Mtr-058346	Medicago truncatula	46.83	9.00e-119	420.00
IUUC-Mla-059116	Melampsora laricipopulina	27.22	1.00e-41	163.00
IUUC-Mga-060038	Meleagris gallopavo	32.90	3.00e-50	191.00
IUUC-Mvi-060272	Microbotryum violaceum	26.96	5.00e-40	158.00
IUUC-Mmr-060877	Microcebus murinus	30.27	3.00e-53	202.00
IUUC-Mdo-062168	Monodelphis domestica	31.71	3.00e-53	202.00
IUUC-Mmu-063441	Mus musculus	30.10	4.00e-54	205.00
IUUC-Mac-065330	Musa acuminata	56.54	4.00e-120	424.00
IUUC-Mpu-065704	Mustela putorius furo	29.94	2.00e-52	199.00
IUUC-Mlu-067640	Myotis lucifugus	29.55	5.00e-52	198.00
IUUC-Nfi-068589	Neosartorya fischeri	29.12	2.00e-28	120.00
IUUC-Ncr-068769	Neurospora crassa	30.42	6.00e-35	141.00
IUUC-Nle-069105	Nomascus leucogenys	31.02	3.00e-50	192.00
IUUC-Opr-070203	Ochotona princeps	30.86	2.00e-56	212.00
IUUC-Ont-072054	Oreochromis niloticus	31.18	5.00e-56	211.00
IUUC-Oan-073624	Ornithorhynchus anatinus	31.73	2.00e-50	192.00
IUUC-Ocu-074326	Oryctolagus cuniculus	30.53	5.00e-52	198.00
IUUC-Obr-076038	Oryza brachyantha	73.93	0.00e+00	749.00
IUUC-Ogl-077463	Oryza glaberrima	75.65	0.00e+00	745.00
IUUC-Ogu-078631	Oryza glumaepatula	75.56	0.00e+00	749.00
IUUC-Oin-079242	Oryza indica	75.65	0.00e+00	746.00
IUUC-Olo-080652	Oryza longistaminata	72.78	0.00e+00	703.00
IUUC-Ome-081109	Oryza meridionalis	75.79	0.00e+00	715.00
IUUC-Oni-082187	Oryza nivara	75.65	0.00e+00	746.00
IUUC-Opu-083995	Oryza punctata	75.14	0.00e+00	750.00
IUUC-Oru-084962	Oryza rufipogon	73.79	0.00e+00	706.00
IUUC-Osa-086201	Oryza sativa	73.79	0.00e+00	706.00
IUUC-Ola-087115	Oryzias latipes	29.75	2.00e-51	196.00
IUUC-Olu-087842	Ostreococcus lucimarinus	30.75	1.00e-53	203.00
IUUC-Oga-088204	Otolemur garnettii	29.88	5.00e-52	198.00
IUUC-Oar-089297	Ovis aries	30.27	5.00e-52	198.00
IUUC-Ptr-090953	Pan troglodytes	29.94	4.00e-52	198.00
IUUC-Pan-092451	Papio anubis	29.35	3.00e-51	196.00
IUUC-Psi-092999	Pelodiscus sinensis	31.63	4.00e-59	221.00
IUUC-Pma-094304	Petromyzon marinus	29.81	1.00e-48	187.00
IUUC-Pno-095060	Phaeosphaeria nodorum	27.45	1.00e-31	130.00
IUUC-Ppa-095433	Physcomitrella patens	38.01	9.00e-88	317.00
IUUC-Pfo-096433	Poecilia formosa	30.60	8.00e-50	191.00
IUUC-Pab-098677	Pongo abelii	30.14	2.00e-52	199.00
IUUC-Pop-099990	Populus trichocarpa	49.22	4.00e-126	444.00
IUUC-Pca-100444	Procavia capensis	33.74	1.00e-37	150.00
IUUC-Ppe-101318	Prunus persica	47.18	6.00e-128	450.00
IUUC-Pva-102162	Pteropus vampyrus	25.81	3.00e-38	152.00
IUUC-Pgr-103329	Puccinia graminis	27.37	4.00e-47	182.00
IUUC-Ptt-103837	Puccinia triticina	26.51	8.00e-46	177.00
IUUC-Pte-104133	Pyrenophora teres	31.23	2.00e-35	143.00
IUUC-Pyt-104675	Pyrenophora triticirepentis	31.23	4.00e-35	142.00
IUUC-Rno-105004	Rattus norvegicus	30.53	9.00e-54	204.00
IUUC-Sce-106443	Saccharomyces cerevisiae	27.06	8.00e-36	144.00
IUUC-Sha-107199	Sarcophilus harrisii	30.53	1.00e-54	207.00
IUUC-Sja-107670	Schizosaccharomyces japonicus	29.09	1.00e-53	203.00
IUUC-Spo-108125	Schizosaccharomyces pombe	26.00	2.00e-45	176.00
IUUC-Ssl-108534	Sclerotinia sclerotiorum	26.84	2.00e-43	169.00
IUUC-Smo-109588	Selaginella moellendorffii	39.80	4.00e-90	324.00
IUUC-Sit-110043	Setaria italica	81.94	0.00e+00	803.00
IUUC-Stu-112396	Solanum tuberosum	47.12	2.00e-126	445.00
IUUC-Sar-113359	Sorex araneus	30.77	8.00e-29	120.00
IUUC-Sre-114995	Sporisorium reilianum	30.40	1.00e-52	200.00
IUUC-Ssc-115397	Sus scrofa	30.14	7.00e-54	204.00
IUUC-Tgu-116834	Taeniopygia guttata	31.05	4.00e-63	235.00
IUUC-Tru-118764	Takifugu rubripes	32.35	6.00e-61	228.00
IUUC-Tsy-119118	Tarsius syrichta	29.16	3.00e-51	195.00
IUUC-Tni-120053	Tetraodon nigroviridis	31.57	5.00e-61	228.00
IUUC-Tca-121842	Theobroma cacao	49.24	2.00e-128	452.00
IUUC-Tre-122172	Trichoderma reesei	32.49	5.00e-41	161.00
IUUC-Tvi-122288	Trichoderma virens	33.01	7.00e-34	137.00
IUUC-Tae-124861	Triticum aestivum	72.36	0.00e+00	707.00
IUUC-Tur-126846	Triticum urartu	60.44	3.00e-101	361.00
IUUC-Tme-127164	Tuber melanosporum	26.44	1.00e-37	150.00
IUUC-Tbe-127458	Tupaia belangeri	31.08	3.00e-52	198.00
IUUC-Ttr-128680	Tursiops truncatus	29.55	1.00e-48	186.00
IUUC-Uma-129508	Ustilago maydis	29.89	1.00e-50	193.00
IUUC-Vda-129696	Verticillium dahliae	30.69	7.00e-33	134.00
IUUC-Vpa-130820	Vicugna pacos	29.98	8.00e-52	197.00
IUUC-Vvi-131126	Vitis vinifera	51.37	2.00e-136	478.00
IUUC-Xtr-131826	Xenopus tropicalis	31.70	9.00e-63	233.00
IUUC-Xma-133373	Xiphophorus maculatus	31.57	1.00e-54	207.00
IUUC-Yli-134432	Yarrowia lipolytica	28.14	1.00e-36	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence