iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mga-059633

UUCD1 version

UUC-MeG-00630

Ensembl Protein ID

ENSMGAP00000014906.2

UniProt Accession

G1NMS5; G1NMS5_MELGA

Protein Name

Uncharacterized protein

Gene Name

CHD4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000014084.2	ENSMGAT00000015848.2	ENSMGAP00000014906.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-16	59.4	451	495

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 451  EFCRVCKDGGE----LLCCDACPSSYHIHCLNPP-LPEIPNGE-WLCPRCT 495
           58*********....*******************.*******8.******6 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

MASGIGSPSP CSGGSDDDEM EILLNSAIPQ HQEHEEEPEE ELLSEAETLK IKKKKKPKKL 60
KEPKVPKLSK RQKKESLSLL PQLGDSSGEG NEFVEEEEEV LRSDSEGSDY TPGKKKKKKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCGG GCATCGGATC TCCGTCGCCG TGCTCAGGGG GCAGTGATGA TGACGAGATG 60
GAGATTCTGC TGAACAGTGC TATCCCCCAG CATCAAGGTA TTGAGGGTCT GCAGGGCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0016020--C:membrane
GO:0000790--C:nuclear chromatin
GO:0016581--C:NuRD complex
GO:0032993--C:protein-DNA complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0031492--F:nucleosomal DNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980--F:RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	89.34	0.00e+00	2811.00
IUUC-Apl-004175	Anas platyrhynchos	98.32	0.00e+00	2930.00
IUUC-Aca-004774	Anolis carolinensis	92.00	0.00e+00	2828.00
IUUC-Ame-011098	Astyanax mexicanus	80.91	0.00e+00	2375.00
IUUC-Bta-013220	Bos taurus	90.38	0.00e+00	2784.00
IUUC-Cel-018683	Caenorhabditis elegans	58.56	0.00e+00	1269.00
IUUC-Cja-019510	Callithrix jacchus	85.23	0.00e+00	2503.00
IUUC-Cfa-020422	Canis familiaris	90.23	0.00e+00	2805.00
IUUC-Cpo-021704	Cavia porcellus	91.95	0.00e+00	2776.00
IUUC-Csa-023625	Chlorocebus sabaeus	90.87	0.00e+00	2797.00
IUUC-Cho-024361	Choloepus hoffmanni	86.92	0.00e+00	1415.00
IUUC-Csv-025847	Ciona savignyi	55.82	0.00e+00	1399.00
IUUC-Dno-029656	Dasypus novemcinctus	90.41	0.00e+00	2778.00
IUUC-Dor-030354	Dipodomys ordii	92.11	0.00e+00	1835.00
IUUC-Ete-032757	Echinops telfairi	70.19	0.00e+00	1706.00
IUUC-Eca-034112	Equus caballus	90.91	0.00e+00	2806.00
IUUC-Eeu-034777	Erinaceus europaeus	69.40	0.00e+00	1711.00
IUUC-Fca-036056	Felis catus	90.13	0.00e+00	2800.00
IUUC-Fal-037312	Ficedula albicollis	98.89	0.00e+00	2397.00
IUUC-Gmo-038957	Gadus morhua	74.26	0.00e+00	1355.00
IUUC-Gga-040216	Gallus gallus	98.89	0.00e+00	3051.00
IUUC-Gac-042478	Gasterosteus aculeatus	77.75	0.00e+00	2042.00
IUUC-Gma-043999	Glycine max	43.74	0.00e+00	722.00
IUUC-Ggo-044428	Gorilla gorilla	84.25	0.00e+00	2443.00
IUUC-Hsa-045908	Homo sapiens	89.08	0.00e+00	2790.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	90.37	0.00e+00	2798.00
IUUC-Lch-049948	Latimeria chalumnae	79.33	0.00e+00	1903.00
IUUC-Loc-052144	Lepisosteus oculatus	84.85	0.00e+00	2113.00
IUUC-Laf-053870	Loxodonta africana	81.08	0.00e+00	1798.00
IUUC-Mcc-055773	Macaca mulatta	88.98	0.00e+00	2793.00
IUUC-Meu-056292	Macropus eugenii	64.88	0.00e+00	901.00
IUUC-Mmr-060886	Microcebus murinus	88.52	0.00e+00	2788.00
IUUC-Mdo-062872	Monodelphis domestica	90.47	0.00e+00	2529.00
IUUC-Mmu-063672	Mus musculus	94.38	0.00e+00	2333.00
IUUC-Mpu-066692	Mustela putorius furo	90.18	0.00e+00	2800.00
IUUC-Mlu-067785	Myotis lucifugus	90.28	0.00e+00	2796.00
IUUC-Nle-070039	Nomascus leucogenys	90.44	0.00e+00	2749.00
IUUC-Opr-070960	Ochotona princeps	69.00	0.00e+00	2229.00
IUUC-Ont-072418	Oreochromis niloticus	83.09	0.00e+00	2136.00
IUUC-Ocu-074177	Oryctolagus cuniculus	88.07	0.00e+00	2813.00
IUUC-Ola-086880	Oryzias latipes	82.37	0.00e+00	2171.00
IUUC-Oga-088970	Otolemur garnettii	88.88	0.00e+00	2799.00
IUUC-Oar-090422	Ovis aries	92.19	0.00e+00	2761.00
IUUC-Ptr-090799	Pan troglodytes	74.88	0.00e+00	1905.00
IUUC-Pan-092441	Papio anubis	90.91	0.00e+00	2800.00
IUUC-Psi-093530	Pelodiscus sinensis	91.20	0.00e+00	2881.00
IUUC-Ppa-095213	Physcomitrella patens	42.37	0.00e+00	719.00
IUUC-Pfo-097530	Poecilia formosa	82.74	0.00e+00	2112.00
IUUC-Pab-097959	Pongo abelii	89.93	0.00e+00	2719.00
IUUC-Pca-100829	Procavia capensis	82.72	0.00e+00	1388.00
IUUC-Pva-103186	Pteropus vampyrus	90.54	0.00e+00	2756.00
IUUC-Rno-105692	Rattus norvegicus	93.61	0.00e+00	2322.00
IUUC-Sha-107233	Sarcophilus harrisii	75.11	0.00e+00	1895.00
IUUC-Sly-110976	Solanum lycopersicum	43.50	0.00e+00	727.00
IUUC-Ssc-115295	Sus scrofa	89.66	0.00e+00	2777.00
IUUC-Tgu-117484	Taeniopygia guttata	97.21	0.00e+00	3021.00
IUUC-Tru-118745	Takifugu rubripes	77.39	0.00e+00	2513.00
IUUC-Tsy-119261	Tarsius syrichta	80.68	0.00e+00	1926.00
IUUC-Tni-120764	Tetraodon nigroviridis	76.58	0.00e+00	2494.00
IUUC-Ttr-128478	Tursiops truncatus	86.20	0.00e+00	2593.00
IUUC-Vvi-130849	Vitis vinifera	42.99	0.00e+00	718.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence