iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-30	101.8	21	49

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlr 31
            ++++ + +d +++v+G++Dg+i +WDl+
   Q: 21   CISSILLtDDgGTIVTGCHDGQICLWDLS 49
           46677568778****************86 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAGNSLVLPI VLWGRKAPTH CISSILLTDD GGTIVTGCHD GQICLWDLSE ELEVNPRALL 60
FGHTAAITCL SKACASGDKQ YTVSASANGE MCLWDVNDGR CIEFTKLACT HTGIQFYQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCGGCGG TGGCTCCTTG CAACCAGGCA GGGTGAGGTC GGCTGCACCT GCTTGGGGTC 60
CCTCGGGGTC GCCCACCCGG AATTGCCCGG CTGGTCCTCC TCACGTACGC CGCCTTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0008021--C:synaptic vesicle
GO:0002244--P:hematopoietic progenitor cell differentiation

KEGG

rno:66031

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	24.08	9.00e-13	68.90
IUUC-Aml-001481	Ailuropoda melanoleuca	95.03	0.00e+00	2788.00
IUUC-Atr-002981	Amborella trichopoda	25.00	4.00e-08	54.70
IUUC-Apl-003943	Anas platyrhynchos	85.24	0.00e+00	1742.00
IUUC-Aca-005145	Anolis carolinensis	87.67	0.00e+00	2583.00
IUUC-Ame-011180	Astyanax mexicanus	71.90	0.00e+00	2096.00
IUUC-Bta-012912	Bos taurus	93.76	0.00e+00	2778.00
IUUC-Cel-018565	Caenorhabditis elegans	35.05	3.00e-99	357.00
IUUC-Cja-019970	Callithrix jacchus	93.18	0.00e+00	2622.00
IUUC-Cfa-020677	Canis familiaris	94.23	0.00e+00	2768.00
IUUC-Cpo-021408	Cavia porcellus	94.03	0.00e+00	2789.00
IUUC-Csa-023786	Chlorocebus sabaeus	94.60	0.00e+00	2575.00
IUUC-Cho-024612	Choloepus hoffmanni	92.01	0.00e+00	1134.00
IUUC-Cin-025255	Ciona intestinalis	40.63	0.00e+00	1013.00
IUUC-Csv-026361	Ciona savignyi	40.42	0.00e+00	971.00
IUUC-Cne-026981	Cryptococcus neoformans	25.83	1.00e-20	96.30
IUUC-Dre-027951	Danio rerio	79.70	0.00e+00	1021.00
IUUC-Dno-029072	Dasypus novemcinctus	93.38	0.00e+00	2749.00
IUUC-Dor-030771	Dipodomys ordii	87.04	0.00e+00	1455.00
IUUC-Dme-031768	Drosophila melanogaster	40.20	0.00e+00	777.00
IUUC-Ete-032492	Echinops telfairi	83.83	0.00e+00	2280.00
IUUC-Eca-033496	Equus caballus	94.56	0.00e+00	2780.00
IUUC-Eeu-034689	Erinaceus europaeus	87.79	0.00e+00	726.00
IUUC-Fca-035530	Felis catus	94.50	0.00e+00	2780.00
IUUC-Fal-037238	Ficedula albicollis	81.26	0.00e+00	2254.00
IUUC-Gmo-039528	Gadus morhua	75.94	0.00e+00	2142.00
IUUC-Gga-041043	Gallus gallus	84.51	0.00e+00	1976.00
IUUC-Gac-042524	Gasterosteus aculeatus	77.36	0.00e+00	2202.00
IUUC-Gma-043201	Glycine max	21.62	6.00e-11	63.90
IUUC-Ggo-045112	Gorilla gorilla	94.71	0.00e+00	2785.00
IUUC-Hsa-046732	Homo sapiens	94.56	0.00e+00	2781.00
IUUC-Itr-048340	Ictidomys tridecemlineatus	94.85	0.00e+00	938.00
IUUC-Lch-050643	Latimeria chalumnae	82.95	0.00e+00	2010.00
IUUC-Lpe-051544	Leersia perrieri	24.37	4.00e-10	61.20
IUUC-Loc-051774	Lepisosteus oculatus	78.41	0.00e+00	2129.00
IUUC-Laf-054349	Loxodonta africana	94.23	0.00e+00	2749.00
IUUC-Mcc-055800	Macaca mulatta	94.83	0.00e+00	2794.00
IUUC-Meu-056091	Macropus eugenii	89.59	0.00e+00	1702.00
IUUC-Mtr-058676	Medicago truncatula	21.99	7.00e-12	67.00
IUUC-Mga-060096	Meleagris gallopavo	64.89	0.00e+00	1158.00
IUUC-Mmr-061271	Microcebus murinus	94.77	0.00e+00	2767.00
IUUC-Mdo-062622	Monodelphis domestica	91.21	0.00e+00	2684.00
IUUC-Mmu-063262	Mus musculus	97.38	0.00e+00	2823.00
IUUC-Mpu-066523	Mustela putorius furo	94.43	0.00e+00	2763.00
IUUC-Mlu-067288	Myotis lucifugus	92.58	0.00e+00	2720.00
IUUC-Nle-069610	Nomascus leucogenys	93.15	0.00e+00	2734.00
IUUC-Opr-070413	Ochotona princeps	88.88	0.00e+00	1348.00
IUUC-Ont-072199	Oreochromis niloticus	78.20	0.00e+00	2230.00
IUUC-Oan-073095	Ornithorhynchus anatinus	91.34	0.00e+00	2705.00
IUUC-Ocu-074257	Oryctolagus cuniculus	94.90	0.00e+00	2787.00
IUUC-Oba-075713	Oryza barthii	24.87	9.00e-11	63.50
IUUC-Obr-076894	Oryza brachyantha	25.77	4.00e-10	61.20
IUUC-Ogl-077521	Oryza glaberrima	24.87	1.00e-10	63.20
IUUC-Ogu-078103	Oryza glumaepatula	24.87	2.00e-10	62.00
IUUC-Oin-080169	Oryza indica	24.87	9.00e-11	63.20
IUUC-Olo-080818	Oryza longistaminata	21.21	2.00e-13	72.00
IUUC-Ome-081902	Oryza meridionalis	24.87	1.00e-10	63.20
IUUC-Oni-082333	Oryza nivara	25.26	1.00e-10	62.80
IUUC-Opu-083952	Oryza punctata	25.38	7.00e-11	63.90
IUUC-Oru-085112	Oryza rufipogon	24.87	1.00e-10	63.20
IUUC-Osa-085615	Oryza sativa	24.87	8.00e-11	62.40
IUUC-Ola-087177	Oryzias latipes	77.10	0.00e+00	2166.00
IUUC-Oga-088290	Otolemur garnettii	93.69	0.00e+00	2778.00
IUUC-Oar-089575	Ovis aries	92.61	0.00e+00	2728.00
IUUC-Ptr-091041	Pan troglodytes	94.90	0.00e+00	2793.00
IUUC-Pan-092048	Papio anubis	94.97	0.00e+00	2794.00
IUUC-Psi-093637	Pelodiscus sinensis	89.72	0.00e+00	2688.00
IUUC-Pma-094714	Petromyzon marinus	63.51	0.00e+00	1075.00
IUUC-Pfo-096529	Poecilia formosa	67.87	0.00e+00	1906.00
IUUC-Pab-098194	Pongo abelii	94.97	0.00e+00	2795.00
IUUC-Pop-099546	Populus trichocarpa	21.68	1.00e-09	59.70
IUUC-Pca-100950	Procavia capensis	90.62	0.00e+00	686.00
IUUC-Ppe-101653	Prunus persica	20.60	8.00e-08	53.50
IUUC-Pva-102803	Pteropus vampyrus	93.44	0.00e+00	2733.00
IUUC-Sha-106926	Sarcophilus harrisii	71.42	0.00e+00	1410.00
IUUC-Smo-109304	Selaginella moellendorffii	23.58	3.00e-21	97.80
IUUC-Sit-110049	Setaria italica	26.51	2.00e-10	61.20
IUUC-Sly-111516	Solanum lycopersicum	21.07	1.00e-10	63.20
IUUC-Stu-111982	Solanum tuberosum	20.96	2.00e-09	58.90
IUUC-Sar-113730	Sorex araneus	86.11	0.00e+00	1863.00
IUUC-Sbi-114887	Sorghum bicolor	28.40	2.00e-11	64.70
IUUC-Ssc-116213	Sus scrofa	91.48	0.00e+00	1864.00
IUUC-Tgu-117297	Taeniopygia guttata	84.77	0.00e+00	2563.00
IUUC-Tru-117887	Takifugu rubripes	77.84	0.00e+00	2188.00
IUUC-Tsy-118970	Tarsius syrichta	89.80	0.00e+00	2450.00
IUUC-Tni-119791	Tetraodon nigroviridis	76.92	0.00e+00	1039.00
IUUC-Tca-121391	Theobroma cacao	22.90	2.00e-13	72.00
IUUC-Tae-123628	Triticum aestivum	25.87	9.00e-14	73.60
IUUC-Tur-125959	Triticum urartu	25.87	7.00e-14	72.80
IUUC-Tbe-127847	Tupaia belangeri	87.28	0.00e+00	918.00
IUUC-Ttr-128200	Tursiops truncatus	90.40	0.00e+00	2594.00
IUUC-Vpa-130178	Vicugna pacos	93.27	0.00e+00	2031.00
IUUC-Xtr-132699	Xenopus tropicalis	82.86	0.00e+00	1793.00
IUUC-Xma-133180	Xiphophorus maculatus	75.82	0.00e+00	1415.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence