iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048485

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01030746

Gene Name

WDR90

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000003896.2	ENSSTOT00000003907.2	ENSSTOP00000003502.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-34	115.5	1488	1520
UBD/Beta-Prp	5.70e-76	255.5	1359	1661

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH ++v+ + f +d  + ++G+ Dg+++vW+l 
   Q: 1488 GHRSKVNEVVFsPDeSHCATGGEDGSVRVWSLA 1520
           8***********999***************986 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.............tgkcvht 89
           +++    +ll  gs +g + vwd+  g ++   + +++e+  + +  +   lv+gs+ + +++w++              +++ ++ 
   Q: 1359 LCY-GAAPLLYCGSSSGQVCVWDTCVGRCFLAWEADDGEIGVLLCLGS--RLVSGSNTKRLRLWSVGavpelrrkgsgarSSSVFME 1442
           455.667889999999*************999999999*999999988..69************77777778898988776677776 PP
   S: 90   lk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
            +   +  v+s sf+ s d  ++G+   t+    + +g+ ++ + sgh++ vn vv++pd++ +++G+ D+ vr+W+l++++l+ ++
   Q: 1443 RElTLDGAVVSASFDSSMDMGIVGTTAGTLWYVSWAEGSSIR-LVSGHRSKVNEVVFSPDESHCATGGEDGSVRVWSLASMELVIQF 1528
           667789999999999999**********99998889999999.******************************************** PP
   S: 176  tgghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
           +   ++s  +l++++++      +++v+g  dgt++++++ ++++  +++ h++    ++fs +++ ++sg +Dg++ +  lr+g +
   Q: 1529 QV-LNQSCLCLAWSPSScghpeqQQVVAGYSDGTLRVFSIARTSMELKMQPHRAALMALAFSTDGQTILSGDKDGVVAVSRLRTGIT 1614
           98.*********99999999999**************************************************************** PP
   S: 257  lktlqlhn....ssvisvav.......lsfgdnvlvlgse.dskvniwkl 294
            ++l+ h+    s    ++        l++++  l l+++ d+++ +w+ 
   Q: 1615 FRVLSDHQgapiS---TIQStskkygdLGVEGTDLWLAASgDQRISVWAS 1661
           ********75542...2222233555777777776666555*******85 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

AWQHPFLNIF RYFRVDEWKR SSKEGDVSVV TVLDKALKST VYRIQGSVSA SNYILLPKTS 60
TQSLGLTGRY LYVLFRPLPT KHFAIHLDLS TEDGQVIRVS FSSLFKEFRS SATWLQFPFV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTGGCAGC ACCCGTTCCT CAACATCTTC AGATACTTCA GGGTGGACGA GTGGAAGCGG 60
TCCAGCAAGG AGGGCGATGT GTCTGTGGTG ACGGTACTGG TGGGGCCTTC CTCCTGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR007714--CFA20/WDR90/C3orf67
IPR002469--Peptidase_S9B_N
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05018--DUF667
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001801	Ailuropoda melanoleuca	70.15	0.00e+00	2414.00
IUUC-Apl-003387	Anas platyrhynchos	55.21	0.00e+00	1753.00
IUUC-Aca-005235	Anolis carolinensis	52.27	0.00e+00	1608.00
IUUC-Ame-011595	Astyanax mexicanus	47.90	0.00e+00	949.00
IUUC-Bta-012328	Bos taurus	69.04	0.00e+00	2298.00
IUUC-Cja-019058	Callithrix jacchus	68.59	0.00e+00	1212.00
IUUC-Cfa-020934	Canis familiaris	67.36	0.00e+00	2210.00
IUUC-Cpo-022025	Cavia porcellus	72.06	0.00e+00	2495.00
IUUC-Cre-022928	Chlamydomonas reinhardtii	27.51	2.00e-56	215.00
IUUC-Csa-023022	Chlorocebus sabaeus	71.15	0.00e+00	2367.00
IUUC-Cin-025133	Ciona intestinalis	35.84	0.00e+00	1168.00
IUUC-Csv-025816	Ciona savignyi	35.03	0.00e+00	828.00
IUUC-Dre-028823	Danio rerio	46.39	0.00e+00	1585.00
IUUC-Dno-029211	Dasypus novemcinctus	72.07	0.00e+00	971.00
IUUC-Dor-030211	Dipodomys ordii	72.47	0.00e+00	2160.00
IUUC-Ete-032363	Echinops telfairi	56.21	0.00e+00	855.00
IUUC-Eca-034296	Equus caballus	69.83	0.00e+00	2324.00
IUUC-Eeu-035226	Erinaceus europaeus	53.81	0.00e+00	786.00
IUUC-Fca-035384	Felis catus	70.43	0.00e+00	2402.00
IUUC-Fal-037660	Ficedula albicollis	54.97	0.00e+00	1747.00
IUUC-Gga-040666	Gallus gallus	57.27	0.00e+00	1343.00
IUUC-Gac-041358	Gasterosteus aculeatus	47.10	0.00e+00	1552.00
IUUC-Ggo-045121	Gorilla gorilla	69.88	0.00e+00	2353.00
IUUC-Hsa-046289	Homo sapiens	69.94	0.00e+00	2305.00
IUUC-Lch-050009	Latimeria chalumnae	48.79	0.00e+00	1649.00
IUUC-Loc-052629	Lepisosteus oculatus	45.84	0.00e+00	831.00
IUUC-Mcc-055834	Macaca mulatta	67.07	0.00e+00	1287.00
IUUC-Meu-056162	Macropus eugenii	58.37	0.00e+00	772.00
IUUC-Mga-060167	Meleagris gallopavo	54.15	0.00e+00	1648.00
IUUC-Mmr-060761	Microcebus murinus	78.50	2.00e-142	497.00
IUUC-Mdo-061886	Monodelphis domestica	57.72	0.00e+00	2113.00
IUUC-Mmu-063652	Mus musculus	72.75	0.00e+00	2576.00
IUUC-Mlu-068141	Myotis lucifugus	68.89	0.00e+00	2345.00
IUUC-Nle-069133	Nomascus leucogenys	65.52	0.00e+00	1474.00
IUUC-Ont-072496	Oreochromis niloticus	48.00	0.00e+00	1690.00
IUUC-Oan-072833	Ornithorhynchus anatinus	53.23	0.00e+00	1684.00
IUUC-Ola-086564	Oryzias latipes	45.56	0.00e+00	1561.00
IUUC-Oga-088919	Otolemur garnettii	68.17	0.00e+00	2315.00
IUUC-Oar-089946	Ovis aries	57.18	0.00e+00	1749.00
IUUC-Ptr-090755	Pan troglodytes	69.43	0.00e+00	1947.00
IUUC-Pan-092054	Papio anubis	70.39	0.00e+00	2370.00
IUUC-Psi-093467	Pelodiscus sinensis	57.24	0.00e+00	2002.00
IUUC-Pma-094573	Petromyzon marinus	40.94	0.00e+00	1330.00
IUUC-Pfo-096849	Poecilia formosa	45.43	0.00e+00	1456.00
IUUC-Pab-098320	Pongo abelii	69.48	0.00e+00	2086.00
IUUC-Pca-100172	Procavia capensis	59.76	0.00e+00	1146.00
IUUC-Pva-102772	Pteropus vampyrus	69.25	0.00e+00	1309.00
IUUC-Rno-105046	Rattus norvegicus	72.48	0.00e+00	2580.00
IUUC-Sha-107094	Sarcophilus harrisii	57.73	0.00e+00	2158.00
IUUC-Ssc-116257	Sus scrofa	65.24	0.00e+00	2128.00
IUUC-Tgu-117323	Taeniopygia guttata	54.13	0.00e+00	1482.00
IUUC-Tru-118717	Takifugu rubripes	45.77	0.00e+00	1538.00
IUUC-Tni-120108	Tetraodon nigroviridis	45.65	0.00e+00	1473.00
IUUC-Ttr-128378	Tursiops truncatus	76.69	0.00e+00	1003.00
IUUC-Xtr-131760	Xenopus tropicalis	49.31	0.00e+00	1671.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence