iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000007603.1	ENSORLT00000009531.1	ENSORLP00000009530.1
ENSORLG00000007603.1	ENSORLT00000009532.1	ENSORLP00000009531.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-34	114.8	373	412
UBD/Beta-Prp	1.70e-83	280.5	1321	1621

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvs..GsdDgtikvWDlrtgvll 36
           gHtd+v++l f  s+t l+s   +++ +++vWD++ g++l
   Q: 373  GHTDKVSALTFngSTTVLASaqTGNNSVVRVWDYHNGNCL 412
           8**********86658888855558889*********997 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...............tgkcvhtlk 91
             +++l+t+  +g +  wd+ t+ +l   + +++e+  + +  +   l  gs+ r ++vwd+                +++++++ +
   Q: 1321 HMDPFLFTSTNRGHVCAWDANTQACLIIWEADDDEIGVLLCRGN--RLFAGSSTRRLRVWDIGamkritskekacsaeDRETISVER 1405
           45677888888888888888888888888888888888888888..58888888888888887666666655555554444444444 PP
   S: 92   ..ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
               + +  s +f+ + d  ++G+   t+   +++ ++ ++ + sgh++ vn +v++ d++ ++++s D+ vr+W   + +l+ +++
   Q: 1406 eiMLDGTTISAAFDNTMDMGIVGTTAGTLWYINWSDNSAIR-LVSGHKAKVNDAVFSFDESHFATCSEDGSVRVWTTHSYELVVQFQ 1491
           33344444556666677888888888888887778888888.9*******************************************9 PP
   S: 177  gghtdsvyslsfdsng....kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllkt 259
              +++  ++ +++ +    +++++g  dgt+++++l ++e+  +++ h+  v+ ++ s +++ +vs+++ g + + + +sg +l++
   Q: 1492 V-LNQACGCVCWSPASikdhTRVAAGYGDGTLRIFQLASTEMEIKMHPHQVAVTAIQYSAHGHVIVSAGKNGLVAVSNPTSGATLRV 1577
           8.999999999999999999******************************************************************* PP
   S: 260  lqlhn.ssvisvav.......lsfgdnvlvlgse.dskvniwkl 294
           +  h+  +++ v++       +++++n+l l+++ d +v +w+ 
   Q: 1578 IRDHKgATITTVQCvneqckkFGLEGNELWLAAGaDRRVSVWAA 1621
           *****989999999888888888889999888888*******86 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

DKLLKCPVFR ISGVIPENSY ILIPRNTKQS LELTGHFFYL LFRPSAGKYF LVHIDVASKE 60
GQIVRISFSN MFPEFKFTPT WLQFPFETTA KSAKHGLVGR APGSVRWTCL MLDLQDILSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACAAGTTGC TCAAATGTCC AGTGTTTCGC ATCAGTGGTG TTATTCCAGA AAACAGCTAC 60
ATCCTAATCC CCAGAAACAC CAAACAATCT CTGGAACTGA CTGGACACTT TTTCTACCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR007714--CFA20/WDR90/C3orf67
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05018--DUF667
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001801	Ailuropoda melanoleuca	45.78	0.00e+00	1554.00
IUUC-Apl-003387	Anas platyrhynchos	50.82	0.00e+00	1634.00
IUUC-Aca-005235	Anolis carolinensis	50.26	0.00e+00	1538.00
IUUC-Ame-011595	Astyanax mexicanus	56.10	0.00e+00	1998.00
IUUC-Bta-012328	Bos taurus	47.24	0.00e+00	823.00
IUUC-Cja-019058	Callithrix jacchus	47.71	0.00e+00	827.00
IUUC-Cfa-020934	Canis familiaris	45.83	0.00e+00	1462.00
IUUC-Cpo-022025	Cavia porcellus	44.76	0.00e+00	1509.00
IUUC-Cre-022928	Chlamydomonas reinhardtii	30.43	3.00e-75	277.00
IUUC-Csa-023022	Chlorocebus sabaeus	45.08	0.00e+00	1481.00
IUUC-Cin-025133	Ciona intestinalis	38.75	0.00e+00	728.00
IUUC-Csv-025816	Ciona savignyi	35.55	0.00e+00	1102.00
IUUC-Dre-028823	Danio rerio	53.96	0.00e+00	1907.00
IUUC-Dno-029211	Dasypus novemcinctus	49.04	0.00e+00	631.00
IUUC-Dor-030211	Dipodomys ordii	47.95	0.00e+00	909.00
IUUC-Ete-032363	Echinops telfairi	48.57	4.00e-90	325.00
IUUC-Eca-034296	Equus caballus	47.79	0.00e+00	850.00
IUUC-Eeu-035226	Erinaceus europaeus	40.46	9.00e-164	570.00
IUUC-Fca-035384	Felis catus	45.83	0.00e+00	1546.00
IUUC-Fal-037660	Ficedula albicollis	53.84	0.00e+00	955.00
IUUC-Gga-040666	Gallus gallus	50.00	0.00e+00	1209.00
IUUC-Gac-041358	Gasterosteus aculeatus	66.61	0.00e+00	2354.00
IUUC-Ggo-045121	Gorilla gorilla	45.46	0.00e+00	1521.00
IUUC-Hsa-046289	Homo sapiens	45.46	0.00e+00	1491.00
IUUC-Itr-048485	Ictidomys tridecemlineatus	45.67	0.00e+00	797.00
IUUC-Lch-050009	Latimeria chalumnae	52.67	0.00e+00	1816.00
IUUC-Loc-052629	Lepisosteus oculatus	54.95	0.00e+00	1050.00
IUUC-Mcc-055834	Macaca mulatta	40.31	0.00e+00	1244.00
IUUC-Meu-056162	Macropus eugenii	44.94	6.00e-177	615.00
IUUC-Mga-060167	Meleagris gallopavo	49.97	0.00e+00	1583.00
IUUC-Mmr-060761	Microcebus murinus	51.97	4.00e-92	330.00
IUUC-Mdo-061886	Monodelphis domestica	49.39	0.00e+00	1790.00
IUUC-Mmu-063652	Mus musculus	46.68	0.00e+00	1608.00
IUUC-Mlu-068141	Myotis lucifugus	45.72	0.00e+00	1546.00
IUUC-Nle-069133	Nomascus leucogenys	43.13	0.00e+00	887.00
IUUC-Ont-072496	Oreochromis niloticus	70.24	0.00e+00	2543.00
IUUC-Oan-072833	Ornithorhynchus anatinus	48.62	0.00e+00	866.00
IUUC-Oga-088919	Otolemur garnettii	45.40	0.00e+00	1513.00
IUUC-Oar-089946	Ovis aries	49.77	0.00e+00	672.00
IUUC-Ptr-090755	Pan troglodytes	46.30	0.00e+00	1301.00
IUUC-Pan-092054	Papio anubis	45.00	0.00e+00	1472.00
IUUC-Psi-093467	Pelodiscus sinensis	51.76	0.00e+00	1845.00
IUUC-Pma-094553	Petromyzon marinus	47.30	0.00e+00	838.00
IUUC-Pfo-096849	Poecilia formosa	63.54	0.00e+00	2162.00
IUUC-Pab-098320	Pongo abelii	44.86	0.00e+00	1345.00
IUUC-Pca-100172	Procavia capensis	43.46	0.00e+00	1340.00
IUUC-Pva-102772	Pteropus vampyrus	49.54	0.00e+00	903.00
IUUC-Rno-105046	Rattus norvegicus	46.89	0.00e+00	1616.00
IUUC-Sha-107094	Sarcophilus harrisii	49.45	0.00e+00	1796.00
IUUC-Ssc-116257	Sus scrofa	45.67	0.00e+00	1476.00
IUUC-Tgu-117323	Taeniopygia guttata	51.03	0.00e+00	743.00
IUUC-Tru-118717	Takifugu rubripes	63.27	0.00e+00	2213.00
IUUC-Tni-120108	Tetraodon nigroviridis	61.35	0.00e+00	2096.00
IUUC-Ttr-128378	Tursiops truncatus	50.00	0.00e+00	668.00
IUUC-Xtr-131760	Xenopus tropicalis	47.33	0.00e+00	1630.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence