iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cin-025603

Ensembl Protein ID

ENSCINP00000013407.3

UniProt Accession

F6PH03; F6PH03_CIOIN

Genbank Protein ID

ENSCINP00000013407

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01002837

Gene Name

ci-cadherin

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000006530.3	ENSCINT00000013407.3	ENSCINP00000013407.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	40.48	1.90e+00	29.60	IUUC-Sce-106453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ciona intestinalis

Functional Description
(View)

Cadherins are calcium-dependent cell adhesion proteins.

Protein Sequence
(Fasta)

MRGVGSAITL VIVISLQIIL PSEGKFFNKL INQAKRNRVK RSWSYPVISI PETTDRDPPF 60
VRKNILDITN DNPNVKTYEL QNEDPTKFAI EFSAVDPSAG ASIWQLVGLD RDVPGGDKYI 120

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Nucleotide Sequence
(Fasta)

GCGTAAAAAC TGAATAAGAG GTTATAAAAG TTAAGAATTT TTTGTTGTTT TGCTTTGAAA 60
ACAAAAAAAA AGAGCTGGGA ATAACTAAAT AGGAGTAGTG GAAATAATGA GGGGAGTTGG 120

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Sequence Source

Ensembl

Keyword

KW-0106--Calcium
KW-0130--Cell adhesion
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002126--Cadherin
IPR015919--Cadherin-like
IPR020894--Cadherin_CS
IPR000233--Cadherin_cytoplasmic-dom
IPR027397--Catenin_binding_dom
IPR023226--Glyco_hydro_49_N_dom

PROSITE

PS00232--CADHERIN_1
PS50268--CADHERIN_2

Pfam

PF00028--Cadherin
PF01049--Cadherin_C

PRINTS

PR00205--CADHERIN

SMART

SM00112--CA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0005509--F:calcium ion binding
GO:0007156--P:homophilic cell adhesion via plasma membrane adhesion molecules

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009328	Aspergillus nidulans	22.22	3.70e-01	27.30
IUUC-Cja-019003	Callithrix jacchus	30.42	7.00e-19	88.20
IUUC-Cho-024956	Choloepus hoffmanni	29.82	4.00e-15	78.20
IUUC-Itr-048244	Ictidomys tridecemlineatus	29.01	3.00e-21	97.10
IUUC-Mmr-061467	Microcebus murinus	29.98	4.00e-26	114.00
IUUC-Rno-105000	Rattus norvegicus	27.12	6.00e-20	92.00
IUUC-Sce-106453	Saccharomyces cerevisiae	30.00	2.50e-01	30.40
IUUC-Sha-107415	Sarcophilus harrisii	28.63	4.00e-25	110.00
IUUC-Smo-108811	Selaginella moellendorffii	32.31	6.30e-02	29.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence