iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069000

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01096517

Gene Name

TRIM50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000008989.1	ENSNLET00000011515.1	ENSNLEP00000010979.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	32.1	16	57
E3 activity/RING/U-box	3.10e-08	33.5	12	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle fk+ pl l+CgH +++ Cl   + l++    e rCP+Cr
   Q: 16   CPICLEVFKE-PLMLQCGHSYCKGCL---VSLSCHLDAELRCPVCR 57
           ********99.999************...677999**********8 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssI...ekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           + + CpI le++++P +l++G++y + ++     +l+   + cPv+rq ++ ++  Pn +l r+i+a
   Q: 12   DRLQCPICLEVFKEPLMLQCGHSYCKGCLvslSCHLDAELR-CPVCRQAVDGSSSPPNVSLARVIEA 77
           5689*********************9876111567788877.**********************987 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAWQVSLPEL EDRLQCPICL EVFKEPLMLQ CGHSYCKGCL VSLSCHLDAE LRCPVCRQAV 60
DGSSSPPNVS LARVIEALRL PGDPEPKVCM HHRNPLSLFC EKDQELICGL CGLLGSHQHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCATGAT GGGGCATGTG CGGGAGCGCG AGGCGGGGCA TGTAACCATA GCGTGCGGGG 60
CATGATGGGG CACGGACGTG GGGGTTTAGG TGGGGCACGT AATTGGAGCG CGCGGGGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

nle:100593281

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001406	Ailuropoda melanoleuca	90.76	0.00e+00	904.00
IUUC-Apl-004051	Anas platyrhynchos	62.28	5.00e-176	610.00
IUUC-Ame-010964	Astyanax mexicanus	53.97	3.00e-156	544.00
IUUC-Bta-012642	Bos taurus	91.68	0.00e+00	887.00
IUUC-Cja-019011	Callithrix jacchus	93.13	0.00e+00	866.00
IUUC-Cfa-020270	Canis familiaris	89.12	0.00e+00	897.00
IUUC-Cpo-022458	Cavia porcellus	89.74	0.00e+00	876.00
IUUC-Csa-023478	Chlorocebus sabaeus	97.13	0.00e+00	945.00
IUUC-Dno-028894	Dasypus novemcinctus	89.25	0.00e+00	855.00
IUUC-Dor-030228	Dipodomys ordii	85.16	0.00e+00	737.00
IUUC-Eca-033497	Equus caballus	91.99	0.00e+00	921.00
IUUC-Eeu-034910	Erinaceus europaeus	76.00	2.00e-132	464.00
IUUC-Fca-036164	Felis catus	90.76	0.00e+00	911.00
IUUC-Gga-040573	Gallus gallus	56.12	3.00e-97	348.00
IUUC-Ggo-044471	Gorilla gorilla	97.95	0.00e+00	951.00
IUUC-Hsa-046039	Homo sapiens	97.95	0.00e+00	954.00
IUUC-Itr-048897	Ictidomys tridecemlineatus	89.37	0.00e+00	849.00
IUUC-Lch-050638	Latimeria chalumnae	56.68	1.00e-164	573.00
IUUC-Loc-051971	Lepisosteus oculatus	54.98	4.00e-154	537.00
IUUC-Laf-054291	Loxodonta africana	90.41	0.00e+00	868.00
IUUC-Mcc-055708	Macaca mulatta	97.13	0.00e+00	944.00
IUUC-Meu-056670	Macropus eugenii	72.05	1.00e-141	496.00
IUUC-Mla-059039	Melampsora laricipopulina	43.08	4.00e-09	55.80
IUUC-Mga-059415	Meleagris gallopavo	60.78	2.00e-176	611.00
IUUC-Mmr-061410	Microcebus murinus	92.90	0.00e+00	867.00
IUUC-Mmu-064094	Mus musculus	87.99	0.00e+00	877.00
IUUC-Mpu-065781	Mustela putorius furo	89.12	0.00e+00	887.00
IUUC-Mlu-067974	Myotis lucifugus	90.64	0.00e+00	878.00
IUUC-Opr-071216	Ochotona princeps	90.70	3.00e-115	408.00
IUUC-Ocu-074859	Oryctolagus cuniculus	88.60	0.00e+00	852.00
IUUC-Oga-088285	Otolemur garnettii	90.14	0.00e+00	898.00
IUUC-Oar-090161	Ovis aries	82.58	0.00e+00	785.00
IUUC-Ptr-091672	Pan troglodytes	97.95	0.00e+00	954.00
IUUC-Pan-092870	Papio anubis	97.34	0.00e+00	946.00
IUUC-Psi-093742	Pelodiscus sinensis	65.76	0.00e+00	661.00
IUUC-Pab-098034	Pongo abelii	97.95	0.00e+00	953.00
IUUC-Pca-100115	Procavia capensis	81.82	9.00e-70	256.00
IUUC-Pva-103234	Pteropus vampyrus	91.26	0.00e+00	880.00
IUUC-Rno-105163	Rattus norvegicus	87.37	0.00e+00	858.00
IUUC-Sha-106575	Sarcophilus harrisii	64.46	3.00e-161	561.00
IUUC-Ssc-115600	Sus scrofa	90.76	0.00e+00	907.00
IUUC-Tbe-128151	Tupaia belangeri	92.93	5.00e-99	352.00
IUUC-Ttr-128947	Tursiops truncatus	90.76	0.00e+00	871.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence