iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006404

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_904124

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_403625.1	scaffold_403625.1	scaffold_403625.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-18	65.9	2362	2397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           H +svt +a    + l+++Gs Dg +k+WD +  +l
   Q: 2362 HLGSVTKIATipRTSLFLTGSKDGEVKLWDAKAAKL 2397
           999*****96664489**************766655 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MMIDSNFDQL IFSHTLKDPI DNLPLRQIRS EIVPPAPNRS QSSIDWLPDF AGYSWLAYGA 60
STLLVISHLP SPLRGEDSTN GPFFRQILEV SGDVSSPVTS VSWSPVTPSV GELAVGSGNY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTGTTTTT AGATTGGAAC ATGATGATTG ATTCGAATTT TGACCAACTC ATTTTTTCTC 60
ATACTCTAAA GGGCTAAAAT GTTAATGCGT TTCTTTACAT GAAGATGGTC GTTGATTATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_904124

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	56.44	7.00e-52	195.00
IUUC-Aml-001368	Ailuropoda melanoleuca	31.33	3.00e-36	148.00
IUUC-Atr-002754	Amborella trichopoda	60.63	7.00e-173	599.00
IUUC-Apl-003377	Anas platyrhynchos	32.64	3.00e-36	148.00
IUUC-Aca-004649	Anolis carolinensis	33.79	1.00e-37	152.00
IUUC-Ath-006612	Arabidopsis thaliana	89.86	0.00e+00	4380.00
IUUC-Afu-009077	Aspergillus fumigatus	28.47	9.00e-37	149.00
IUUC-Ani-009437	Aspergillus nidulans	26.97	2.00e-37	150.00
IUUC-Ang-009742	Aspergillus niger	26.64	5.00e-41	162.00
IUUC-Ame-010919	Astyanax mexicanus	28.23	4.00e-38	154.00
IUUC-Bta-013088	Bos taurus	31.89	9.00e-37	150.00
IUUC-Bdi-014471	Brachypodium distachyon	41.47	5.00e-161	560.00
IUUC-Bol-016375	Brassica oleracea	80.54	0.00e+00	3858.00
IUUC-Bra-016630	Brassica rapa	80.38	0.00e+00	3905.00
IUUC-Cel-018537	Caenorhabditis elegans	30.00	2.00e-25	112.00
IUUC-Cja-018770	Callithrix jacchus	28.28	1.00e-35	146.00
IUUC-Cfa-021215	Canis familiaris	32.27	1.00e-35	146.00
IUUC-Cpo-022333	Cavia porcellus	33.07	2.00e-36	149.00
IUUC-Csa-023972	Chlorocebus sabaeus	27.51	2.00e-36	149.00
IUUC-Cho-024762	Choloepus hoffmanni	27.92	4.00e-35	144.00
IUUC-Csv-026055	Ciona savignyi	38.84	3.00e-37	151.00
IUUC-Dre-028673	Danio rerio	33.19	2.00e-36	149.00
IUUC-Dno-029855	Dasypus novemcinctus	29.54	2.00e-28	122.00
IUUC-Dor-030381	Dipodomys ordii	30.23	6.00e-36	147.00
IUUC-Dme-031825	Drosophila melanogaster	36.61	2.00e-41	165.00
IUUC-Ete-033176	Echinops telfairi	33.62	3.00e-35	145.00
IUUC-Eca-033386	Equus caballus	27.76	2.00e-36	148.00
IUUC-Eeu-035011	Erinaceus europaeus	29.80	1.00e-33	139.00
IUUC-Fca-035735	Felis catus	32.78	6.00e-37	150.00
IUUC-Fal-037367	Ficedula albicollis	29.82	7.00e-37	150.00
IUUC-Gmo-038687	Gadus morhua	30.82	4.00e-35	144.00
IUUC-Gga-040693	Gallus gallus	29.67	3.00e-37	150.00
IUUC-Gac-041986	Gasterosteus aculeatus	29.69	2.00e-37	152.00
IUUC-Gma-044099	Glycine max	46.46	0.00e+00	2041.00
IUUC-Ggo-044811	Gorilla gorilla	31.13	9.00e-36	146.00
IUUC-Hsa-045950	Homo sapiens	31.13	1.00e-35	146.00
IUUC-Hvu-047213	Hordeum vulgare	63.70	8.00e-116	409.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	27.76	1.00e-35	146.00
IUUC-Lch-050020	Latimeria chalumnae	28.98	2.00e-37	152.00
IUUC-Lpe-051382	Leersia perrieri	37.70	0.00e+00	1208.00
IUUC-Loc-052909	Lepisosteus oculatus	28.13	2.00e-39	158.00
IUUC-Laf-054195	Loxodonta africana	33.62	5.00e-36	147.00
IUUC-Mcc-055533	Macaca mulatta	27.25	3.00e-36	148.00
IUUC-Meu-056627	Macropus eugenii	29.07	1.00e-22	102.00
IUUC-Mtr-058725	Medicago truncatula	46.58	0.00e+00	2073.00
IUUC-Mga-059386	Meleagris gallopavo	33.05	1.00e-35	146.00
IUUC-Mmr-060784	Microcebus murinus	29.06	1.00e-37	152.00
IUUC-Mdo-062837	Monodelphis domestica	33.62	2.00e-30	129.00
IUUC-Mmu-063808	Mus musculus	31.46	2.00e-38	155.00
IUUC-Mac-065224	Musa acuminata	44.49	0.00e+00	1140.00
IUUC-Mpu-066054	Mustela putorius furo	27.51	5.00e-36	147.00
IUUC-Mlu-067458	Myotis lucifugus	29.20	4.00e-36	147.00
IUUC-Nfi-068420	Neosartorya fischeri	28.47	2.00e-35	144.00
IUUC-Nle-070123	Nomascus leucogenys	31.13	1.00e-35	146.00
IUUC-Opr-070543	Ochotona princeps	25.41	8.00e-18	87.40
IUUC-Ont-071658	Oreochromis niloticus	28.80	3.00e-37	151.00
IUUC-Oan-072796	Ornithorhynchus anatinus	28.37	1.00e-14	72.00
IUUC-Ocu-074711	Oryctolagus cuniculus	33.47	7.00e-36	147.00
IUUC-Oba-075826	Oryza barthii	37.10	0.00e+00	1461.00
IUUC-Obr-076145	Oryza brachyantha	36.36	0.00e+00	1416.00
IUUC-Ogu-078307	Oryza glumaepatula	37.05	0.00e+00	1481.00
IUUC-Oin-080118	Oryza indica	36.37	0.00e+00	888.00
IUUC-Olo-080848	Oryza longistaminata	38.38	4.00e-163	568.00
IUUC-Oni-082792	Oryza nivara	38.39	0.00e+00	1163.00
IUUC-Opu-084153	Oryza punctata	37.88	0.00e+00	1193.00
IUUC-Oru-084415	Oryza rufipogon	37.64	0.00e+00	1132.00
IUUC-Osa-085332	Oryza sativa	48.96	2.00e-168	585.00
IUUC-Ola-087560	Oryzias latipes	29.31	9.00e-34	140.00
IUUC-Oga-088816	Otolemur garnettii	30.90	7.00e-37	150.00
IUUC-Oar-089618	Ovis aries	31.56	2.00e-36	149.00
IUUC-Ptr-090937	Pan troglodytes	31.13	1.00e-35	146.00
IUUC-Pan-091912	Papio anubis	27.51	2.00e-36	148.00
IUUC-Psi-093590	Pelodiscus sinensis	31.38	6.00e-35	144.00
IUUC-Ppa-095505	Physcomitrella patens	43.08	7.00e-115	409.00
IUUC-Pfo-097445	Poecilia formosa	28.01	4.00e-39	157.00
IUUC-Pab-098507	Pongo abelii	27.51	2.00e-36	148.00
IUUC-Pop-098812	Populus trichocarpa	52.34	0.00e+00	1454.00
IUUC-Pca-101008	Procavia capensis	32.04	1.00e-35	146.00
IUUC-Ppe-101610	Prunus persica	48.98	0.00e+00	2243.00
IUUC-Pva-102432	Pteropus vampyrus	33.05	8.00e-36	147.00
IUUC-Rno-105076	Rattus norvegicus	31.46	8.00e-38	153.00
IUUC-Sha-106955	Sarcophilus harrisii	33.19	1.00e-35	145.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	35.48	8.00e-29	122.00
IUUC-Smo-109573	Selaginella moellendorffii	48.23	3.00e-120	424.00
IUUC-Sit-109981	Setaria italica	40.78	0.00e+00	765.00
IUUC-Sly-110968	Solanum lycopersicum	44.34	0.00e+00	1924.00
IUUC-Stu-111939	Solanum tuberosum	71.75	1.00e-76	278.00
IUUC-Sar-113751	Sorex araneus	29.17	2.00e-20	95.90
IUUC-Sbi-113768	Sorghum bicolor	64.97	6.00e-66	242.00
IUUC-Ssc-116371	Sus scrofa	33.07	2.00e-36	148.00
IUUC-Tgu-117108	Taeniopygia guttata	32.76	5.00e-37	150.00
IUUC-Tru-117628	Takifugu rubripes	29.32	3.00e-38	154.00
IUUC-Tsy-119228	Tarsius syrichta	34.80	2.00e-34	142.00
IUUC-Tni-120709	Tetraodon nigroviridis	28.83	3.00e-38	154.00
IUUC-Tca-121789	Theobroma cacao	48.95	0.00e+00	2015.00
IUUC-Tae-125726	Triticum aestivum	37.78	0.00e+00	1444.00
IUUC-Tur-126437	Triticum urartu	40.56	1.00e-62	234.00
IUUC-Tbe-127760	Tupaia belangeri	27.44	4.00e-36	148.00
IUUC-Ttr-128991	Tursiops truncatus	31.10	6.00e-37	150.00
IUUC-Vpa-130309	Vicugna pacos	31.56	2.00e-36	148.00
IUUC-Vvi-131584	Vitis vinifera	47.30	0.00e+00	789.00
IUUC-Xtr-132638	Xenopus tropicalis	34.16	9.00e-36	146.00
IUUC-Xma-134109	Xiphophorus maculatus	27.69	1.00e-38	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence