iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117145

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01055402

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000003972.1	ENSTGUT00000004149.1	ENSTGUP00000004104.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-23	79.7	82	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f........sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt ++t++a f         ++l++++s D t+ vWD  +g++++
   Q: 82   GHTHKITAIAaFsssdvteeKTDLIITASADRTVIVWDCASGRQVQ 127
           8********779**7776543367******************9987 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGSAEKSS VQTIGEEQIQ NPYTELLVLK GHQDIVRFLV QIDDCRIASA 60
GDDGIVFLWN AQTGEKLYEL HGHTHKITAI AAFSSSDVTE EKTDLIITAS ADRTVIVWDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCGCT GGCTGATCGG CGGCGGCCGC GAGCCGCAGG GCTCGGCCGA GGTAGGTGAG 60
CCGGCTCCCG GGCAGCCTGG CGCTTGGGCT GGTGCTGTCG GGAGGCGCCG GACCGCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	76.47	0.00e+00	728.00
IUUC-Apl-004087	Anas platyrhynchos	89.86	0.00e+00	757.00
IUUC-Aca-005359	Anolis carolinensis	76.91	0.00e+00	721.00
IUUC-Ame-010669	Astyanax mexicanus	41.12	2.00e-76	279.00
IUUC-Bta-013534	Bos taurus	74.29	0.00e+00	709.00
IUUC-Cja-019219	Callithrix jacchus	76.91	0.00e+00	709.00
IUUC-Cfa-020310	Canis familiaris	74.72	0.00e+00	690.00
IUUC-Cpo-021664	Cavia porcellus	74.73	0.00e+00	706.00
IUUC-Csa-024228	Chlorocebus sabaeus	77.46	0.00e+00	729.00
IUUC-Cho-024898	Choloepus hoffmanni	75.34	3.00e-98	351.00
IUUC-Dre-028538	Danio rerio	54.27	1.00e-130	459.00
IUUC-Dno-028861	Dasypus novemcinctus	75.05	0.00e+00	708.00
IUUC-Dor-030111	Dipodomys ordii	76.37	0.00e+00	729.00
IUUC-Ete-032444	Echinops telfairi	75.00	2.00e-135	475.00
IUUC-Eca-033676	Equus caballus	76.25	0.00e+00	725.00
IUUC-Eeu-034571	Erinaceus europaeus	66.59	4.00e-177	613.00
IUUC-Fca-035387	Felis catus	77.34	0.00e+00	731.00
IUUC-Fal-037310	Ficedula albicollis	95.48	0.00e+00	872.00
IUUC-Gmo-039224	Gadus morhua	52.89	8.00e-128	449.00
IUUC-Gga-040957	Gallus gallus	89.16	0.00e+00	817.00
IUUC-Gac-042385	Gasterosteus aculeatus	54.39	2.00e-139	488.00
IUUC-Ggo-044973	Gorilla gorilla	76.52	0.00e+00	717.00
IUUC-Hsa-046842	Homo sapiens	76.59	0.00e+00	723.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	76.56	3.00e-145	507.00
IUUC-Lch-049625	Latimeria chalumnae	64.47	1.00e-173	602.00
IUUC-Loc-052368	Lepisosteus oculatus	60.75	2.00e-156	544.00
IUUC-Laf-053678	Loxodonta africana	75.00	0.00e+00	707.00
IUUC-Mcc-055184	Macaca mulatta	76.52	0.00e+00	696.00
IUUC-Meu-056165	Macropus eugenii	70.59	0.00e+00	628.00
IUUC-Mga-060184	Meleagris gallopavo	82.91	2.00e-73	266.00
IUUC-Mmr-060965	Microcebus murinus	76.59	0.00e+00	720.00
IUUC-Mdo-062702	Monodelphis domestica	77.90	0.00e+00	743.00
IUUC-Mmu-063649	Mus musculus	70.78	2.00e-102	365.00
IUUC-Mpu-065747	Mustela putorius furo	75.16	0.00e+00	725.00
IUUC-Mlu-067873	Myotis lucifugus	76.03	0.00e+00	723.00
IUUC-Nle-069670	Nomascus leucogenys	77.46	0.00e+00	726.00
IUUC-Opr-070266	Ochotona princeps	69.67	0.00e+00	653.00
IUUC-Ont-071242	Oreochromis niloticus	54.30	8.00e-139	486.00
IUUC-Oan-072879	Ornithorhynchus anatinus	75.51	0.00e+00	692.00
IUUC-Ocu-074872	Oryctolagus cuniculus	58.01	3.00e-137	481.00
IUUC-Ola-087211	Oryzias latipes	49.67	5.00e-117	414.00
IUUC-Oga-088852	Otolemur garnettii	74.95	0.00e+00	717.00
IUUC-Oar-089812	Ovis aries	74.51	0.00e+00	708.00
IUUC-Ptr-091067	Pan troglodytes	77.24	0.00e+00	726.00
IUUC-Pan-091778	Papio anubis	76.86	0.00e+00	721.00
IUUC-Psi-093932	Pelodiscus sinensis	84.25	0.00e+00	760.00
IUUC-Pfo-096845	Poecilia formosa	55.19	1.00e-136	479.00
IUUC-Pab-097892	Pongo abelii	75.18	0.00e+00	634.00
IUUC-Pca-100567	Procavia capensis	56.02	3.00e-136	478.00
IUUC-Pva-102560	Pteropus vampyrus	73.52	0.00e+00	686.00
IUUC-Rno-105662	Rattus norvegicus	72.09	0.00e+00	687.00
IUUC-Sha-107058	Sarcophilus harrisii	75.72	0.00e+00	707.00
IUUC-Sar-113643	Sorex araneus	63.41	1.00e-155	541.00
IUUC-Ssc-115791	Sus scrofa	76.04	0.00e+00	717.00
IUUC-Tru-117875	Takifugu rubripes	54.82	1.00e-140	492.00
IUUC-Tsy-119030	Tarsius syrichta	75.55	1.00e-164	572.00
IUUC-Tni-119761	Tetraodon nigroviridis	52.74	7.00e-135	473.00
IUUC-Tbe-127757	Tupaia belangeri	74.19	4.00e-176	610.00
IUUC-Ttr-128762	Tursiops truncatus	76.81	0.00e+00	726.00
IUUC-Vpa-130360	Vicugna pacos	76.59	0.00e+00	726.00
IUUC-Xtr-131954	Xenopus tropicalis	64.71	4.00e-172	597.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence