iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099418

Ensembl Protein ID

POPTR_0010s00760.1

UniProt Accession

B9HXE0; B9HXE0_POPTR

Genbank Protein ID

EEF01653.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_768574; POPTR_0010s00760g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s00760	POPTR_0010s00760.1	POPTR_0010s00760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-06	27.0	14	36

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDl 30
           af ++ ++l+ +s+Dg ik+WD+
   Q: 14   AFsPSlDYLAISSGDGRIKIWDT 36
           57778899**************7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MILIKVCGGD LLTAFSPSLD YLAISSGDGR IKIWDTLKGQ VQTEFADITS SEGDFYAKPE 60
RGHLSVDYKC MKWLSLDKKK KRKLGSSLLV LGTGSGDVLA LDVSAGQLKW SVSDCHPGGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTCTCA TAAAAGTCTG TGGTGGGTAT GTTGGTTTAT GTTGAATGGT TGCTAACTAT 60
GTAAGCTATG AGTTATGAGA ATGAAAAGGT TATTAGTGTC GCTTGTCACT TTAAATTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0010s00760g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	26.18	1.00e-22	100.00
IUUC-Atr-002533	Amborella trichopoda	47.80	1.00e-148	520.00
IUUC-Apl-003242	Anas platyrhynchos	22.68	4.00e-17	82.40
IUUC-Aca-004607	Anolis carolinensis	21.75	3.00e-22	99.80
IUUC-Aly-006074	Arabidopsis lyrata	59.23	3.00e-171	594.00
IUUC-Ath-007222	Arabidopsis thaliana	59.86	7.00e-171	593.00
IUUC-Ame-011014	Astyanax mexicanus	27.02	7.00e-20	92.00
IUUC-Bta-012605	Bos taurus	25.45	3.00e-21	96.30
IUUC-Bdi-014072	Brachypodium distachyon	48.72	2.00e-149	521.00
IUUC-Bol-016255	Brassica oleracea	59.57	0.00e+00	706.00
IUUC-Bra-017484	Brassica rapa	59.93	0.00e+00	693.00
IUUC-Cja-019620	Callithrix jacchus	26.91	2.00e-21	97.10
IUUC-Cfa-020520	Canis familiaris	26.18	3.00e-22	99.80
IUUC-Cpo-022456	Cavia porcellus	25.82	2.00e-20	94.00
IUUC-Cho-024726	Choloepus hoffmanni	22.43	7.00e-24	105.00
IUUC-Dre-028051	Danio rerio	29.46	8.00e-21	95.10
IUUC-Dno-030031	Dasypus novemcinctus	22.31	1.00e-25	110.00
IUUC-Dme-031653	Drosophila melanogaster	22.37	2.00e-21	96.70
IUUC-Eca-033243	Equus caballus	21.71	6.00e-19	88.60
IUUC-Eeu-034970	Erinaceus europaeus	22.98	2.00e-10	60.80
IUUC-Fca-036009	Felis catus	26.55	2.00e-22	100.00
IUUC-Fal-037264	Ficedula albicollis	22.20	1.00e-18	87.40
IUUC-Gmo-039124	Gadus morhua	27.91	2.00e-25	110.00
IUUC-Gga-040862	Gallus gallus	23.20	4.00e-24	105.00
IUUC-Gac-041468	Gasterosteus aculeatus	30.31	5.00e-26	112.00
IUUC-Gma-042795	Glycine max	60.58	0.00e+00	631.00
IUUC-Ggo-044432	Gorilla gorilla	26.91	8.00e-22	98.20
IUUC-Hsa-047036	Homo sapiens	26.91	2.00e-21	97.10
IUUC-Hvu-047736	Hordeum vulgare	28.88	2.00e-26	112.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	22.13	2.00e-27	116.00
IUUC-Lch-049553	Latimeria chalumnae	27.51	1.00e-22	100.00
IUUC-Laf-053462	Loxodonta africana	23.62	8.00e-26	111.00
IUUC-Mcc-055239	Macaca mulatta	26.55	3.00e-21	96.70
IUUC-Mtr-057977	Medicago truncatula	61.11	0.00e+00	634.00
IUUC-Mga-060079	Meleagris gallopavo	24.00	8.00e-16	78.20
IUUC-Mmr-061472	Microcebus murinus	26.39	8.00e-22	98.60
IUUC-Mdo-061972	Monodelphis domestica	23.25	1.00e-24	107.00
IUUC-Mmu-063354	Mus musculus	25.91	4.00e-21	95.90
IUUC-Mac-065064	Musa acuminata	59.16	2.00e-143	501.00
IUUC-Mpu-066877	Mustela putorius furo	24.82	2.00e-21	96.70
IUUC-Mlu-067476	Myotis lucifugus	26.02	2.00e-18	87.40
IUUC-Nle-069119	Nomascus leucogenys	26.91	7.00e-22	98.60
IUUC-Ont-072093	Oreochromis niloticus	23.27	2.00e-29	124.00
IUUC-Oan-072944	Ornithorhynchus anatinus	24.39	2.00e-14	73.90
IUUC-Ocu-074472	Oryctolagus cuniculus	26.55	1.00e-20	94.40
IUUC-Oba-075009	Oryza barthii	48.03	4.00e-139	488.00
IUUC-Ogl-077189	Oryza glaberrima	45.13	5.00e-138	484.00
IUUC-Oin-079064	Oryza indica	48.20	6.00e-139	487.00
IUUC-Opu-083604	Oryza punctata	48.55	5.00e-141	494.00
IUUC-Oru-084620	Oryza rufipogon	48.37	5.00e-139	487.00
IUUC-Osa-085345	Oryza sativa	48.37	7.00e-140	490.00
IUUC-Ola-086626	Oryzias latipes	22.60	2.00e-28	120.00
IUUC-Oga-087911	Otolemur garnettii	21.70	3.00e-21	96.70
IUUC-Ptr-091603	Pan troglodytes	26.91	2.00e-21	97.10
IUUC-Pan-092569	Papio anubis	26.55	3.00e-21	96.70
IUUC-Pma-094287	Petromyzon marinus	23.05	3.00e-18	86.30
IUUC-Ppa-095327	Physcomitrella patens	33.33	7.00e-86	311.00
IUUC-Pfo-097292	Poecilia formosa	28.57	3.00e-26	113.00
IUUC-Pab-097878	Pongo abelii	26.91	2.00e-21	97.10
IUUC-Pca-100941	Procavia capensis	26.44	7.00e-16	78.60
IUUC-Ppe-101779	Prunus persica	66.89	0.00e+00	750.00
IUUC-Rno-105084	Rattus norvegicus	26.28	5.00e-21	95.90
IUUC-Sha-107486	Sarcophilus harrisii	23.10	1.00e-25	110.00
IUUC-Smo-108825	Selaginella moellendorffii	33.33	2.00e-71	262.00
IUUC-Sit-110825	Setaria italica	50.51	3.00e-154	538.00
IUUC-Sly-111365	Solanum lycopersicum	57.40	7.00e-178	616.00
IUUC-Stu-112812	Solanum tuberosum	57.24	4.00e-176	610.00
IUUC-Sar-113326	Sorex araneus	26.34	2.00e-19	90.50
IUUC-Sbi-114426	Sorghum bicolor	49.66	1.00e-162	565.00
IUUC-Tgu-116726	Taeniopygia guttata	23.20	4.00e-25	108.00
IUUC-Tru-117848	Takifugu rubripes	29.07	2.00e-26	114.00
IUUC-Tni-120591	Tetraodon nigroviridis	29.07	2.00e-26	113.00
IUUC-Tca-121576	Theobroma cacao	66.27	0.00e+00	729.00
IUUC-Tae-125648	Triticum aestivum	47.75	8.00e-152	530.00
IUUC-Tbe-127832	Tupaia belangeri	22.18	9.00e-21	94.40
IUUC-Ttr-128812	Tursiops truncatus	21.13	1.00e-15	78.20
IUUC-Xma-133557	Xiphophorus maculatus	29.53	7.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence