iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007431

Ensembl Protein ID

AT3G26130.2

UniProt Accession

Q9LTN0; Q9LTN0_ARATH

Genbank Protein ID

ANM65424.1; BAB02432.1

Protein Name

Cellulase (Glycosyl hydrolase family 5) protein

Genbank Nucleotide ID

CP002686; AB024038

Gene Name

At3g26130

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G26130	AT3G26130.2	AT3G26130.2
AT3G26130	AT3G26130.1	AT3G26130.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	22.49	6.00e-03	37.40	IUUC-Spo-108231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MKQREINQME KFFFISVFLL PYVITTFAFP PSTDSRWIVD DGNKGRRVKL TCVNWPSHLE 60
TAVAEGLSKQ PLDAIAEKIV SMGFNCVRLT WPLYLATDES FSAFMTVRQS LRKFRLFEAV 120

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Nucleotide Sequence
(Fasta)

TACAAAACTA ATTAGGGATT AACACCAACC AAATGAAACA GAGAGAGATA AACCAAATGG 60
AAAAATTCTT CTTCATCTCT GTCTTTCTTC TTCCCTACGT CATCACCACT TTCGCTTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0326--Glycosidase
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001547--Glyco_hydro_5
IPR013781--Glyco_hydro_catalytic_dom
IPR017853--Glycoside_hydrolase_SF

Pfam

PF00150--Cellulase

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004553--F:hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975--P:carbohydrate metabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gac-041681	Gasterosteus aculeatus	33.33	1.00e+00	29.60
IUUC-Itr-048647	Ictidomys tridecemlineatus	40.43	3.20e-02	33.10
IUUC-Lch-050314	Latimeria chalumnae	50.00	5.50e-01	28.90
IUUC-Psi-093972	Pelodiscus sinensis	26.87	2.40e-01	28.90
IUUC-Rno-105882	Rattus norvegicus	26.25	1.10e+00	29.30
IUUC-Spo-108231	Schizosaccharomyces pombe	21.89	3.40e-02	32.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence