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Tag Content
iUUCD ID IUUC-Dre-028697
Ensembl Protein ID ENSDARP00000031340.6
UniProt Accession B0R1B2; B0R1B2_DANRE
Genbank Protein ID ENSDARP00000031340
Protein Name WD repeat domain 13
Genbank Nucleotide ID AL954310
Gene Name wdr13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000022974.7 ENSDART00000033294.7 ENSDARP00000031340.6
ENSDARG00000022974.7 ENSDART00000168293.1 ENSDARP00000137854.1
ENSDARG00000022974.7 ENSDART00000168406.1 ENSDARP00000133906.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.30e-21 75.9 212 250
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++vt++a+  s++++vs s Dgt+++W++ +g++++
   Q: 212  GHAGPVTDFAWslSNDIIVSTSKDGTLRIWNTEDGRCIR 250
           8***********987**********************87 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MAAVWQQVLA VDARYNAYRT PTFPQFRTQY IRRRSQLLRE NAKCGFEPGL RRQYLRLRSQ 60
LLALRYGPLS EQSSFRASSV RSSRTTLDRM EDFEEDPRAQ GARGHRRSVS RGSYQLQAQM 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-028697|E3,WD_repeat|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGGTCACGTG ATCAAGCCAA TCCTTCAGAC AGCATGAACC GGTGAGAATC TTGCACGGTA 60
GGTGTCCTTT AAATATCAAA TCATACACTG AAATTACTCT TCGATAAGAA ATAAACATTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028697|E3,WD_repeat|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001029 Aegilops tauschii 33.71 3.00e-27 115.00
IUUC-Aml-001761 Ailuropoda melanoleuca 82.89 0.00e+00 724.00
IUUC-Atr-002577 Amborella trichopoda 38.79 7.00e-59 221.00
IUUC-Aca-004423 Anolis carolinensis 86.19 0.00e+00 800.00
IUUC-Aly-005453 Arabidopsis lyrata 37.58 1.00e-52 200.00
IUUC-Ath-007256 Arabidopsis thaliana 37.27 7.00e-52 198.00
IUUC-Ame-010600 Astyanax mexicanus 97.72 0.00e+00 828.00
IUUC-Bta-013511 Bos taurus 82.89 0.00e+00 724.00
IUUC-Bdi-014322 Brachypodium distachyon 38.18 5.00e-52 198.00
IUUC-Bol-015992 Brassica oleracea 38.41 2.00e-54 207.00
IUUC-Bra-017399 Brassica rapa 37.80 2.00e-54 206.00
IUUC-Cja-019508 Callithrix jacchus 83.09 0.00e+00 725.00
IUUC-Cfa-020273 Canis familiaris 82.89 0.00e+00 723.00
IUUC-Cpo-022002 Cavia porcellus 82.27 0.00e+00 724.00
IUUC-Cre-022575 Chlamydomonas reinhardtii 28.77 3.00e-09 57.00
IUUC-Csa-023862 Chlorocebus sabaeus 82.78 0.00e+00 719.00
IUUC-Cin-025687 Ciona intestinalis 56.91 4.00e-152 531.00
IUUC-Csv-025992 Ciona savignyi 56.44 5.00e-153 534.00
IUUC-Dno-029208 Dasypus novemcinctus 82.89 0.00e+00 724.00
IUUC-Dor-030316 Dipodomys ordii 85.58 2.00e-89 323.00
IUUC-Eca-033362 Equus caballus 82.31 9.00e-177 612.00
IUUC-Eeu-034599 Erinaceus europaeus 69.68 2.00e-102 366.00
IUUC-Fca-035874 Felis catus 83.09 0.00e+00 726.00
IUUC-Gmo-039176 Gadus morhua 95.24 0.00e+00 795.00
IUUC-Gga-040458 Gallus gallus 71.76 4.00e-56 210.00
IUUC-Gac-041802 Gasterosteus aculeatus 95.23 0.00e+00 822.00
IUUC-Gma-043284 Glycine max 33.04 5.00e-53 202.00
IUUC-Ggo-045546 Gorilla gorilla 82.68 0.00e+00 723.00
IUUC-Hsa-046407 Homo sapiens 82.68 0.00e+00 723.00
IUUC-Hvu-047726 Hordeum vulgare 35.49 2.00e-47 183.00
IUUC-Itr-048939 Ictidomys tridecemlineatus 82.89 0.00e+00 724.00
IUUC-Lpe-051374 Leersia perrieri 39.39 5.00e-54 205.00
IUUC-Loc-052403 Lepisosteus oculatus 86.31 0.00e+00 768.00
IUUC-Laf-053721 Loxodonta africana 82.68 0.00e+00 724.00
IUUC-Mcc-055449 Macaca mulatta 82.78 0.00e+00 719.00
IUUC-Meu-056487 Macropus eugenii 83.09 0.00e+00 774.00
IUUC-Mtr-058659 Medicago truncatula 32.87 8.00e-47 181.00
IUUC-Mmr-061406 Microcebus murinus 81.93 2.00e-175 608.00
IUUC-Mdo-062331 Monodelphis domestica 82.84 0.00e+00 736.00
IUUC-Mmu-064001 Mus musculus 82.89 0.00e+00 724.00
IUUC-Mac-064934 Musa acuminata 36.28 4.00e-51 195.00
IUUC-Mpu-065871 Mustela putorius furo 82.68 0.00e+00 724.00
IUUC-Mlu-067463 Myotis lucifugus 82.99 0.00e+00 723.00
IUUC-Nle-070136 Nomascus leucogenys 82.78 0.00e+00 718.00
IUUC-Opr-070913 Ochotona princeps 75.05 0.00e+00 627.00
IUUC-Ont-071347 Oreochromis niloticus 96.47 0.00e+00 875.00
IUUC-Oan-073527 Ornithorhynchus anatinus 77.04 1.00e-161 562.00
IUUC-Ocu-074829 Oryctolagus cuniculus 79.10 0.00e+00 676.00
IUUC-Oba-075666 Oryza barthii 39.70 2.00e-53 203.00
IUUC-Obr-076413 Oryza brachyantha 39.34 2.00e-53 203.00
IUUC-Ogl-076998 Oryza glaberrima 39.70 1.00e-53 204.00
IUUC-Ogu-078287 Oryza glumaepatula 40.00 3.00e-54 206.00
IUUC-Oin-079359 Oryza indica 39.70 2.00e-53 203.00
IUUC-Olo-080438 Oryza longistaminata 37.50 6.00e-28 118.00
IUUC-Ome-081328 Oryza meridionalis 40.00 1.00e-57 217.00
IUUC-Oni-082574 Oryza nivara 39.70 2.00e-53 203.00
IUUC-Opu-083376 Oryza punctata 36.47 8.00e-48 184.00
IUUC-Oru-085162 Oryza rufipogon 39.70 2.00e-53 203.00
IUUC-Osa-085507 Oryza sativa 39.70 2.00e-53 203.00
IUUC-Ola-087387 Oryzias latipes 93.36 0.00e+00 819.00
IUUC-Oga-088694 Otolemur garnettii 82.89 0.00e+00 724.00
IUUC-Oar-090355 Ovis aries 81.65 0.00e+00 705.00
IUUC-Ptr-091488 Pan troglodytes 79.53 1.00e-146 512.00
IUUC-Pan-092516 Papio anubis 82.78 0.00e+00 719.00
IUUC-Pma-094572 Petromyzon marinus 77.00 0.00e+00 726.00
IUUC-Ppa-096003 Physcomitrella patens 34.94 9.00e-41 161.00
IUUC-Pfo-096819 Poecilia formosa 90.98 0.00e+00 811.00
IUUC-Pab-098373 Pongo abelii 79.67 0.00e+00 703.00
IUUC-Pop-099930 Populus trichocarpa 38.37 1.00e-54 207.00
IUUC-Pca-100248 Procavia capensis 80.41 0.00e+00 703.00
IUUC-Ppe-101592 Prunus persica 37.08 5.00e-51 195.00
IUUC-Pva-102971 Pteropus vampyrus 82.47 0.00e+00 723.00
IUUC-Rno-105386 Rattus norvegicus 81.42 3.00e-174 604.00
IUUC-Sha-106520 Sarcophilus harrisii 81.24 0.00e+00 760.00
IUUC-Smo-108859 Selaginella moellendorffii 39.58 4.00e-57 215.00
IUUC-Sit-109987 Setaria italica 38.37 5.00e-52 198.00
IUUC-Sly-111433 Solanum lycopersicum 37.27 6.00e-53 201.00
IUUC-Stu-112677 Solanum tuberosum 35.62 1.00e-55 211.00
IUUC-Sar-113317 Sorex araneus 78.70 9.00e-118 417.00
IUUC-Sbi-114115 Sorghum bicolor 38.69 8.00e-23 100.00
IUUC-Ssc-115697 Sus scrofa 80.39 1.00e-109 389.00
IUUC-Tru-118749 Takifugu rubripes 95.04 0.00e+00 821.00
IUUC-Tni-119685 Tetraodon nigroviridis 91.58 0.00e+00 769.00
IUUC-Tca-121769 Theobroma cacao 37.88 3.00e-53 203.00
IUUC-Tae-125563 Triticum aestivum 34.17 5.00e-33 134.00
IUUC-Tur-126403 Triticum urartu 33.71 4.00e-27 115.00
IUUC-Tbe-127245 Tupaia belangeri 85.19 8.00e-103 367.00
IUUC-Ttr-128854 Tursiops truncatus 82.47 0.00e+00 747.00
IUUC-Vvi-131113 Vitis vinifera 36.17 2.00e-51 196.00
IUUC-Xtr-132420 Xenopus tropicalis 81.55 0.00e+00 697.00
IUUC-Xma-134302 Xiphophorus maculatus 95.44 0.00e+00 868.00
Created Date 25-Jun-2017

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