iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000042879.3	ENSRNOT00000023430.6	ENSRNOP00000023430.6
ENSRNOG00000042879.3	ENSRNOT00000023145.7	ENSRNOP00000023145.7

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-12	47.2	788	817

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H++ v+ +++  ++t l+s++dDg +++W 
   Q: 788  HNSQVWRVSWniTGTVLASSGDDGCVRLWK 817
           9**********9889**************7 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSVVCAAARS HVDVCGPGSL RRPCLHVWSY SIRSYVPNPC YHQKLLSAPL TVKSKEVTFA 60
VISKTADVRL KREQHEWKQE STSCKKMADE PDMGEITSFD KAKLKKTETQ EKNTLWTKET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGTTG TCTGTGCTGC CGCCCGAAGC CATGTTGATG TCTGTGGTCC AGGCAGCCTC 60
CGAAGGCCTT GTCTGCATGT GTGGTCCTAC AGCATCCGGA GCTATGTTCC TAATCCGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001152--Beta-thymosin
IPR013783--Ig-like_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS00500--THYMOSIN_B4
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01290--Thymosin
PF00400--WD40

SMART

SM00152--THY
SM00320--WD40

Gene Ontology

GO:0007015--P:actin filament organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	89.41	2.00e-162	565.00
IUUC-Apl-003654	Anas platyrhynchos	91.88	3.00e-170	591.00
IUUC-Aca-004378	Anolis carolinensis	89.41	8.00e-168	582.00
IUUC-Ath-007107	Arabidopsis thaliana	25.93	8.00e-27	114.00
IUUC-Ago-007816	Ashbya gossypii	32.78	8.00e-38	150.00
IUUC-Ame-011945	Astyanax mexicanus	77.53	1.00e-153	535.00
IUUC-Bta-013306	Bos taurus	88.83	2.00e-169	588.00
IUUC-Bdi-014594	Brachypodium distachyon	28.42	4.00e-30	125.00
IUUC-Bol-016565	Brassica oleracea	26.28	2.00e-27	116.00
IUUC-Bra-017831	Brassica rapa	26.28	2.00e-27	116.00
IUUC-Cel-018235	Caenorhabditis elegans	37.58	4.00e-66	244.00
IUUC-Cja-018849	Callithrix jacchus	89.14	8.00e-168	582.00
IUUC-Cfa-020841	Canis familiaris	52.20	0.00e+00	656.00
IUUC-Cpo-021379	Cavia porcellus	93.66	6.00e-169	586.00
IUUC-Csa-023900	Chlorocebus sabaeus	89.39	2.00e-169	588.00
IUUC-Cho-024660	Choloepus hoffmanni	95.02	3.00e-179	620.00
IUUC-Cin-025471	Ciona intestinalis	52.52	7.00e-90	323.00
IUUC-Csv-026242	Ciona savignyi	54.69	8.00e-76	276.00
IUUC-Dre-028068	Danio rerio	79.94	1.00e-162	565.00
IUUC-Dno-029981	Dasypus novemcinctus	86.87	1.00e-152	532.00
IUUC-Dme-031763	Drosophila melanogaster	54.97	1.00e-95	342.00
IUUC-Ete-032243	Echinops telfairi	61.59	3.00e-99	355.00
IUUC-Eca-033425	Equus caballus	96.56	6.00e-169	586.00
IUUC-Eeu-035119	Erinaceus europaeus	76.24	7.00e-119	420.00
IUUC-Fca-036520	Felis catus	88.99	1.00e-174	605.00
IUUC-Fal-037234	Ficedula albicollis	45.07	0.00e+00	1259.00
IUUC-Gmo-039013	Gadus morhua	78.93	1.00e-157	548.00
IUUC-Gga-041059	Gallus gallus	90.03	8.00e-172	596.00
IUUC-Gac-041337	Gasterosteus aculeatus	78.09	2.00e-153	535.00
IUUC-Gma-044300	Glycine max	28.78	7.00e-29	120.00
IUUC-Ggo-044944	Gorilla gorilla	89.39	0.00e+00	630.00
IUUC-Hsa-046038	Homo sapiens	85.41	0.00e+00	629.00
IUUC-Hvu-047455	Hordeum vulgare	30.69	8.00e-32	130.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	96.56	3.00e-168	584.00
IUUC-Kpa-049201	Komagataella pastoris	34.66	7.00e-38	150.00
IUUC-Lch-050466	Latimeria chalumnae	76.05	5.00e-157	547.00
IUUC-Lpe-051064	Leersia perrieri	31.03	3.00e-31	128.00
IUUC-Loc-052773	Lepisosteus oculatus	74.67	8.00e-153	533.00
IUUC-Laf-053409	Loxodonta africana	88.27	4.00e-169	587.00
IUUC-Meu-055958	Macropus eugenii	69.47	8.00e-123	433.00
IUUC-Mtr-057876	Medicago truncatula	29.09	1.00e-29	123.00
IUUC-Mga-059348	Meleagris gallopavo	92.45	3.00e-172	597.00
IUUC-Mmr-060977	Microcebus murinus	94.01	1.00e-114	405.00
IUUC-Mdo-061806	Monodelphis domestica	91.57	3.00e-176	610.00
IUUC-Mmu-064328	Mus musculus	90.78	1.00e-178	618.00
IUUC-Mac-064960	Musa acuminata	31.20	8.00e-28	117.00
IUUC-Mpu-066873	Mustela putorius furo	95.92	2.00e-163	568.00
IUUC-Mlu-067563	Myotis lucifugus	82.40	1.00e-164	572.00
IUUC-Nle-068977	Nomascus leucogenys	94.56	0.00e+00	632.00
IUUC-Opr-070773	Ochotona princeps	64.29	6.00e-88	317.00
IUUC-Ont-072644	Oreochromis niloticus	78.71	8.00e-158	549.00
IUUC-Oan-073098	Ornithorhynchus anatinus	94.70	6.00e-168	583.00
IUUC-Ocu-073911	Oryctolagus cuniculus	89.66	0.00e+00	633.00
IUUC-Obr-076089	Oryza brachyantha	28.82	7.00e-31	127.00
IUUC-Ogl-077279	Oryza glaberrima	28.92	1.00e-29	123.00
IUUC-Oin-079385	Oryza indica	28.77	2.00e-28	119.00
IUUC-Ome-081809	Oryza meridionalis	29.27	4.00e-31	129.00
IUUC-Opu-083324	Oryza punctata	27.78	9.00e-26	110.00
IUUC-Oru-084801	Oryza rufipogon	28.77	6.00e-30	124.00
IUUC-Osa-085790	Oryza sativa	28.92	1.00e-29	123.00
IUUC-Ola-087096	Oryzias latipes	78.31	5.00e-153	533.00
IUUC-Oga-088798	Otolemur garnettii	94.26	0.00e+00	632.00
IUUC-Oar-090298	Ovis aries	51.86	0.00e+00	1183.00
IUUC-Ptr-091074	Pan troglodytes	94.26	0.00e+00	632.00
IUUC-Pan-092013	Papio anubis	94.74	1.00e-121	429.00
IUUC-Psi-093508	Pelodiscus sinensis	84.75	4.00e-172	597.00
IUUC-Pma-094288	Petromyzon marinus	74.88	4.00e-86	310.00
IUUC-Ppa-095228	Physcomitrella patens	32.04	2.00e-36	146.00
IUUC-Pfo-096384	Poecilia formosa	77.87	7.00e-156	543.00
IUUC-Pab-098629	Pongo abelii	94.56	0.00e+00	633.00
IUUC-Pop-099015	Populus trichocarpa	29.50	2.00e-29	123.00
IUUC-Pca-100322	Procavia capensis	72.50	5.00e-114	404.00
IUUC-Ppe-101303	Prunus persica	27.34	2.00e-30	125.00
IUUC-Pva-102861	Pteropus vampyrus	88.83	1.00e-168	585.00
IUUC-Sce-106420	Saccharomyces cerevisiae	32.08	6.00e-43	167.00
IUUC-Sha-106829	Sarcophilus harrisii	85.47	8.00e-176	609.00
IUUC-Sja-107923	Schizosaccharomyces japonicus	36.94	2.00e-52	199.00
IUUC-Spo-108184	Schizosaccharomyces pombe	36.42	4.00e-50	191.00
IUUC-Smo-109282	Selaginella moellendorffii	34.30	3.00e-34	139.00
IUUC-Sit-110393	Setaria italica	29.59	3.00e-30	125.00
IUUC-Sly-111125	Solanum lycopersicum	30.18	4.00e-31	128.00
IUUC-Stu-112745	Solanum tuberosum	26.79	3.00e-27	115.00
IUUC-Sar-113279	Sorex araneus	96.56	4.00e-168	583.00
IUUC-Sbi-114110	Sorghum bicolor	30.80	1.00e-32	133.00
IUUC-Ssc-115589	Sus scrofa	94.70	3.00e-178	617.00
IUUC-Tgu-117523	Taeniopygia guttata	89.73	2.00e-171	595.00
IUUC-Tru-117985	Takifugu rubripes	55.91	0.00e+00	685.00
IUUC-Tsy-118913	Tarsius syrichta	91.61	5.00e-167	580.00
IUUC-Tni-120670	Tetraodon nigroviridis	78.87	2.00e-156	545.00
IUUC-Tae-122796	Triticum aestivum	30.34	3.00e-31	129.00
IUUC-Tur-126582	Triticum urartu	29.83	4.00e-29	122.00
IUUC-Tme-126885	Tuber melanosporum	33.12	4.00e-42	165.00
IUUC-Tbe-127344	Tupaia belangeri	70.11	3.00e-116	411.00
IUUC-Ttr-128347	Tursiops truncatus	97.19	4.00e-169	587.00
IUUC-Vpa-130656	Vicugna pacos	98.59	1.00e-162	565.00
IUUC-Vvi-131103	Vitis vinifera	27.96	1.00e-30	126.00
IUUC-Xtr-132736	Xenopus tropicalis	85.93	7.00e-166	576.00
IUUC-Xma-133678	Xiphophorus maculatus	78.09	8.00e-156	543.00
IUUC-Yli-134659	Yarrowia lipolytica	37.38	1.00e-49	189.00
IUUC-Zma-135774	Zea mays	30.34	4.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence