iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__1101__AT4G30840.1	fgenesh2_kg.7__1101__AT4G30840.1	fgenesh2_kg.7__1101__AT4G30840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-06	27.5	183	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sdtllvsGsdDgtikvWD 29
           +++++ s t +v+G++   +++WD
   Q: 183  RAVKWaSPTEFVTGGYGFGLQLWD 206
           5789984499************** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEMLQDSFQV HRIPQSKYVD GVRWLPQASA LNRFFATAFY DPDCDSSSIE IQSLDPNPKG 60
NQNTNPLIES LSSWTTPSRV SSLEVAGNGG GGGSFKPMVS AATSSGSLHV LMVDLVEGAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAAACCCTA GAAAACCTCT GGAGCTATGG AGATGCTGCA GGATTCGTTC CAGGTCCATA 60
GGATTCCACA ATCGAAGTAT GTGGATGGAG TTAGATGGCT TCCACAAGCT TCTGCTTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Gene Ontology

GO:0009507--C:chloroplast
GO:0005635--C:nuclear envelope

KEGG

aly:ARALYDRAFT_491668

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	30.77	2.00e-14	72.80
IUUC-Atr-002526	Amborella trichopoda	49.16	7.00e-95	339.00
IUUC-Apl-003533	Anas platyrhynchos	29.59	2.00e-13	68.90
IUUC-Aca-004965	Anolis carolinensis	31.18	1.00e-13	69.70
IUUC-Ath-007253	Arabidopsis thaliana	96.41	0.00e+00	701.00
IUUC-Ame-011694	Astyanax mexicanus	28.40	6.00e-11	60.80
IUUC-Bta-013161	Bos taurus	28.99	9.00e-13	67.40
IUUC-Bdi-014758	Brachypodium distachyon	57.30	4.00e-82	297.00
IUUC-Bol-016489	Brassica oleracea	86.42	6.00e-150	523.00
IUUC-Bra-017838	Brassica rapa	87.88	6.00e-164	569.00
IUUC-Cja-020000	Callithrix jacchus	35.21	6.00e-05	41.20
IUUC-Cfa-021112	Canis familiaris	30.77	3.00e-14	72.40
IUUC-Cpo-022095	Cavia porcellus	30.77	2.00e-14	72.40
IUUC-Cre-022610	Chlamydomonas reinhardtii	32.50	2.00e-07	49.30
IUUC-Csa-023460	Chlorocebus sabaeus	30.77	3.00e-14	72.40
IUUC-Cho-024279	Choloepus hoffmanni	30.18	5.00e-14	71.20
IUUC-Cin-025360	Ciona intestinalis	25.00	1.00e-12	66.20
IUUC-Csv-026301	Ciona savignyi	29.09	2.00e-12	65.90
IUUC-Dre-028097	Danio rerio	28.40	7.00e-12	64.30
IUUC-Dno-029131	Dasypus novemcinctus	30.18	3.00e-14	72.00
IUUC-Dme-031834	Drosophila melanogaster	22.87	6.00e-08	51.20
IUUC-Ete-032448	Echinops telfairi	30.18	3.00e-13	68.60
IUUC-Eca-034409	Equus caballus	30.18	6.00e-14	70.90
IUUC-Eeu-035343	Erinaceus europaeus	27.82	3.00e-08	52.40
IUUC-Fca-036177	Felis catus	30.77	2.00e-14	72.40
IUUC-Fal-037657	Ficedula albicollis	28.99	1.00e-13	69.70
IUUC-Gmo-038946	Gadus morhua	26.04	1.00e-09	56.60
IUUC-Gga-041070	Gallus gallus	28.82	7.00e-13	67.40
IUUC-Gac-042442	Gasterosteus aculeatus	29.59	6.00e-12	64.30
IUUC-Gma-043812	Glycine max	59.27	5.00e-107	380.00
IUUC-Ggo-045223	Gorilla gorilla	30.18	6.00e-14	70.90
IUUC-Hsa-045956	Homo sapiens	30.18	6.00e-14	70.90
IUUC-Itr-048116	Ictidomys tridecemlineatus	29.59	9.00e-15	73.90
IUUC-Lch-050035	Latimeria chalumnae	29.41	7.00e-13	67.40
IUUC-Laf-053404	Loxodonta africana	29.59	3.00e-14	72.00
IUUC-Mcc-055813	Macaca mulatta	30.18	8.00e-14	70.90
IUUC-Meu-056388	Macropus eugenii	25.29	2.00e-08	52.40
IUUC-Mga-060193	Meleagris gallopavo	30.00	9.00e-14	70.50
IUUC-Mmr-060818	Microcebus murinus	30.18	3.00e-13	68.90
IUUC-Mdo-062822	Monodelphis domestica	28.79	3.00e-14	72.00
IUUC-Mmu-064182	Mus musculus	30.18	5.00e-14	71.20
IUUC-Mac-065317	Musa acuminata	53.89	9.00e-73	266.00
IUUC-Mpu-066865	Mustela putorius furo	30.77	2.00e-14	72.80
IUUC-Mlu-067329	Myotis lucifugus	30.77	3.00e-14	72.00
IUUC-Nle-069093	Nomascus leucogenys	30.18	6.00e-14	71.20
IUUC-Opr-070481	Ochotona princeps	30.18	6.00e-14	71.20
IUUC-Ont-072445	Oreochromis niloticus	29.59	4.00e-12	65.10
IUUC-Oan-073029	Ornithorhynchus anatinus	28.99	2.00e-13	68.90
IUUC-Ocu-074275	Oryctolagus cuniculus	30.18	6.00e-14	70.90
IUUC-Ola-086862	Oryzias latipes	29.59	6.00e-10	57.80
IUUC-Oga-088952	Otolemur garnettii	30.18	6.00e-14	70.90
IUUC-Oar-089300	Ovis aries	29.59	1.00e-13	70.10
IUUC-Ptr-091389	Pan troglodytes	30.18	6.00e-14	70.90
IUUC-Pan-092174	Papio anubis	30.18	7.00e-14	70.90
IUUC-Psi-093326	Pelodiscus sinensis	30.59	3.00e-14	72.00
IUUC-Pfo-096331	Poecilia formosa	28.40	2.00e-12	65.90
IUUC-Pab-098306	Pongo abelii	30.18	7.00e-14	71.20
IUUC-Pop-099166	Populus trichocarpa	57.92	1.00e-105	375.00
IUUC-Ppe-101380	Prunus persica	58.17	4.00e-119	420.00
IUUC-Pva-102578	Pteropus vampyrus	30.18	3.00e-14	72.40
IUUC-Rno-105146	Rattus norvegicus	30.18	5.00e-14	71.20
IUUC-Sha-107640	Sarcophilus harrisii	27.40	1.00e-14	73.20
IUUC-Sly-111767	Solanum lycopersicum	59.17	1.00e-110	392.00
IUUC-Stu-112515	Solanum tuberosum	59.61	4.00e-112	397.00
IUUC-Sar-113681	Sorex araneus	28.95	1.00e-07	50.40
IUUC-Sbi-113809	Sorghum bicolor	58.92	2.00e-68	251.00
IUUC-Ssc-116129	Sus scrofa	30.18	8.00e-14	70.50
IUUC-Tgu-117456	Taeniopygia guttata	33.80	2.00e-04	38.10
IUUC-Tru-117630	Takifugu rubripes	28.40	5.00e-12	63.90
IUUC-Tsy-119331	Tarsius syrichta	30.77	5.00e-14	71.60
IUUC-Tni-120077	Tetraodon nigroviridis	27.22	1.00e-08	53.10
IUUC-Tca-121814	Theobroma cacao	63.09	2.00e-126	444.00
IUUC-Tae-123605	Triticum aestivum	49.72	2.00e-85	308.00
IUUC-Tbe-127359	Tupaia belangeri	32.50	3.00e-11	62.00
IUUC-Ttr-128461	Tursiops truncatus	30.18	1.00e-13	70.10
IUUC-Vpa-130162	Vicugna pacos	30.18	9.00e-14	70.90
IUUC-Vvi-131114	Vitis vinifera	58.89	4.00e-115	407.00
IUUC-Xtr-132446	Xenopus tropicalis	28.24	5.00e-13	67.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence