iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090769

Ensembl Protein ID

ENSPTRP00000020219.5

UniProt Accession

H2QHN3; H2QHN3_PANTR

Genbank Protein ID

ENSPTRP00000020219

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03014052

Gene Name

IFT172

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000011771.5	ENSPTRT00000021916.5	ENSPTRP00000020219.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-06	25.9	112	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           t+ vtcl++  + ++v G   g++++ +++t
   Q: 112  TSAVTCLQWpAEYIIVFGLAEGKVRLANTKT 142
           789******5437789899999999977666 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MHLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM 60
KYGRKSYMVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWG DKKVICNKFI QTSAVTCLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCACGGGA GTTGTCGCTG TCTAGGAGCA TCTGAAAGAC AGGTGTGCGT CATGCACTTG 60
AAGCACCTGA GGACCCTGCT GAGCCCTCAG GTGAGGAGTT TGCGTGCCAG TCCCTCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0036064--C:ciliary basal body
GO:1903561--C:extracellular vesicle
GO:0030992--C:intraciliary transport particle B
GO:0097598--C:sperm cytoplasmic droplet
GO:0097225--C:sperm midpiece
GO:0097228--C:sperm principal piece
GO:0060348--P:bone development
GO:0007420--P:brain development
GO:0060271--P:cilium assembly
GO:0031122--P:cytoplasmic microtubule organization
GO:0009953--P:dorsal/ventral pattern formation
GO:0008544--P:epidermis development
GO:0001947--P:heart looping
GO:0061525--P:hindgut development
GO:0070986--P:left/right axis specification
GO:0060173--P:limb development
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0007219--P:Notch signaling pathway
GO:0060021--P:palate development
GO:0045880--P:positive regulation of smoothened signaling pathway
GO:0016485--P:protein processing
GO:0007224--P:smoothened signaling pathway
GO:0021522--P:spinal cord motor neuron differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001775	Ailuropoda melanoleuca	94.91	0.00e+00	3323.00
IUUC-Apl-004180	Anas platyrhynchos	80.05	0.00e+00	2941.00
IUUC-Bta-012784	Bos taurus	94.85	0.00e+00	3289.00
IUUC-Cfa-020359	Canis familiaris	94.28	0.00e+00	3325.00
IUUC-Cho-024397	Choloepus hoffmanni	84.85	0.00e+00	994.00
IUUC-Cin-025243	Ciona intestinalis	73.78	0.00e+00	781.00
IUUC-Csv-025964	Ciona savignyi	64.99	0.00e+00	1573.00
IUUC-Dno-029782	Dasypus novemcinctus	93.12	0.00e+00	2218.00
IUUC-Eca-033288	Equus caballus	95.43	0.00e+00	3358.00
IUUC-Fca-036387	Felis catus	94.74	0.00e+00	3360.00
IUUC-Hsa-046333	Homo sapiens	99.41	0.00e+00	1067.00
IUUC-Loc-052126	Lepisosteus oculatus	75.20	0.00e+00	2810.00
IUUC-Laf-054242	Loxodonta africana	95.48	0.00e+00	3359.00
IUUC-Mcc-055460	Macaca mulatta	94.27	0.00e+00	3311.00
IUUC-Meu-056864	Macropus eugenii	92.30	0.00e+00	3216.00
IUUC-Mmr-060951	Microcebus murinus	91.54	0.00e+00	3182.00
IUUC-Mdo-062290	Monodelphis domestica	93.78	0.00e+00	3286.00
IUUC-Mlu-067149	Myotis lucifugus	93.42	0.00e+00	3324.00
IUUC-Nle-069497	Nomascus leucogenys	94.28	0.00e+00	3362.00
IUUC-Opr-070642	Ochotona princeps	93.85	0.00e+00	3309.00
IUUC-Ocu-074484	Oryctolagus cuniculus	94.34	0.00e+00	3358.00
IUUC-Ola-086935	Oryzias latipes	65.07	0.00e+00	2340.00
IUUC-Psi-093021	Pelodiscus sinensis	88.25	0.00e+00	958.00
IUUC-Pva-102604	Pteropus vampyrus	92.97	0.00e+00	3246.00
IUUC-Rno-104875	Rattus norvegicus	90.96	0.00e+00	947.00
IUUC-Tgu-116577	Taeniopygia guttata	83.53	0.00e+00	937.00
IUUC-Tru-117611	Takifugu rubripes	68.21	0.00e+00	2542.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence