iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049330

Ensembl Protein ID

CAY71687

UniProt Accession

C4R7W2; C4R7W2_KOMPG

Genbank Protein ID

CAY71687.1

Protein Name

RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF)

Genbank Nucleotide ID

FN392322

Gene Name

PAS_chr4_0436

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr4_0436	CAY71687	CAY71687

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-09	34.1	52	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..................lpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiC++++++ p++                  + C+H+fh +C+ +w       +++  CPl+
   Q: 52   CAICRNHLME-PCIdcqpnstsqsniecatawGTCNHAFHMHCITRW------LKTRNVCPLD 107
           ********99.88656565555555555555577*************......********97 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MKWRLMYQVS ILLKVLFAPA TNISDGQEKK RFEVKKWTAV AFWSWNMVVE TCAICRNHLM 60
EPCIDCQPNS TSQSNIECAT AWGTCNHAFH MHCITRWLKT RNVCPLDNGE WVLQKYGN 118

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATGGA GGTTGATGTA CCAGGTAAGC ATTCTTTTAA AGGTTCTGTT TGCACCAGCT 60
ACTAACATCT CAGATGGACA GGAGAAGAAA CGATTTGAAG TCAAAAAGTG GACAGCAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

Gene Ontology

GO:0005829--C:cytosol
GO:0043224--C:nuclear SCF ubiquitin ligase complex
GO:0016874--F:ligase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

ppa:PAS_chr4_0436

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001798	Ailuropoda melanoleuca	64.29	1.00e-37	145.00
IUUC-Atr-002900	Amborella trichopoda	63.27	2.00e-37	145.00
IUUC-Apl-003762	Anas platyrhynchos	65.38	7.00e-30	119.00
IUUC-Aca-005328	Anolis carolinensis	60.00	3.00e-37	144.00
IUUC-Aly-005923	Arabidopsis lyrata	67.05	4.00e-36	140.00
IUUC-Ath-007535	Arabidopsis thaliana	65.17	1.00e-34	135.00
IUUC-Ago-007991	Ashbya gossypii	62.75	6.00e-38	146.00
IUUC-Acl-008332	Aspergillus clavatus	67.42	7.00e-36	139.00
IUUC-Afl-008537	Aspergillus flavus	67.44	2.00e-34	135.00
IUUC-Afu-008985	Aspergillus fumigatus	67.42	7.00e-36	140.00
IUUC-Ani-009342	Aspergillus nidulans	66.30	1.00e-36	142.00
IUUC-Ang-009778	Aspergillus niger	67.44	2.00e-34	135.00
IUUC-Aor-009918	Aspergillus oryzae	67.44	2.00e-34	135.00
IUUC-Ame-010935	Astyanax mexicanus	45.45	4.00e-21	91.30
IUUC-Bgr-012224	Blumeria graminis	63.37	2.00e-36	142.00
IUUC-Bta-012426	Bos taurus	64.29	1.00e-37	145.00
IUUC-Bci-013839	Botrytis cinerea	67.82	3.00e-35	138.00
IUUC-Bdi-014973	Brachypodium distachyon	66.30	1.00e-36	142.00
IUUC-Bol-015671	Brassica oleracea	66.30	3.00e-37	144.00
IUUC-Bra-017850	Brassica rapa	68.18	3.00e-36	141.00
IUUC-Cel-018195	Caenorhabditis elegans	58.41	3.00e-36	140.00
IUUC-Cja-018788	Callithrix jacchus	64.21	4.00e-36	140.00
IUUC-Cfa-020188	Canis familiaris	45.45	3.00e-21	91.30
IUUC-Cpo-021365	Cavia porcellus	64.29	1.00e-37	145.00
IUUC-Cre-022904	Chlamydomonas reinhardtii	54.44	5.00e-25	103.00
IUUC-Csa-024198	Chlorocebus sabaeus	64.29	1.00e-37	145.00
IUUC-Cho-024539	Choloepus hoffmanni	45.45	3.00e-21	91.30
IUUC-Cin-025449	Ciona intestinalis	66.67	6.00e-38	146.00
IUUC-Csv-026356	Ciona savignyi	44.05	9.00e-18	79.00
IUUC-Cgl-026522	Colletotrichum gloeosporioides	58.33	1.00e-36	142.00
IUUC-Cne-027067	Cryptococcus neoformans	55.42	5.00e-28	114.00
IUUC-Cme-027268	Cyanidioschyzon merolae	59.55	3.00e-30	121.00
IUUC-Dre-027434	Danio rerio	64.29	6.00e-38	146.00
IUUC-Dno-029252	Dasypus novemcinctus	63.16	1.00e-35	139.00
IUUC-Dor-030861	Dipodomys ordii	50.00	6.00e-24	100.00
IUUC-Dse-031355	Dothistroma septosporum	66.67	4.00e-37	144.00
IUUC-Dme-031585	Drosophila melanogaster	66.32	2.00e-37	144.00
IUUC-Ete-033111	Echinops telfairi	39.33	2.00e-14	68.60
IUUC-Eca-033758	Equus caballus	64.29	1.00e-37	145.00
IUUC-Fca-035586	Felis catus	64.29	1.00e-37	145.00
IUUC-Fal-037097	Ficedula albicollis	65.43	1.00e-31	124.00
IUUC-Fox-037881	Fusarium oxysporum	64.20	3.00e-31	124.00
IUUC-Fso-038373	Fusarium solani	63.74	8.00e-36	139.00
IUUC-Gmo-039457	Gadus morhua	63.83	1.00e-35	139.00
IUUC-Ggr-039970	Gaeumannomyces graminis	66.67	6.00e-35	137.00
IUUC-Gga-040328	Gallus gallus	64.29	1.00e-37	145.00
IUUC-Gac-041578	Gasterosteus aculeatus	64.29	6.00e-38	146.00
IUUC-Gma-042692	Glycine max	67.05	6.00e-36	140.00
IUUC-Ggo-045249	Gorilla gorilla	46.94	1.00e-21	91.30
IUUC-Hsa-046279	Homo sapiens	64.29	1.00e-37	145.00
IUUC-Hvu-047597	Hordeum vulgare	65.22	2.00e-36	142.00
IUUC-Itr-048174	Ictidomys tridecemlineatus	64.29	1.00e-37	145.00
IUUC-Lch-049667	Latimeria chalumnae	64.29	9.00e-38	145.00
IUUC-Loc-052481	Lepisosteus oculatus	45.45	3.00e-21	91.30
IUUC-Lma-053052	Leptosphaeria maculans	68.89	7.00e-37	143.00
IUUC-Laf-053827	Loxodonta africana	63.54	2.00e-36	141.00
IUUC-Mcc-055208	Macaca mulatta	64.29	1.00e-37	145.00
IUUC-Meu-056143	Macropus eugenii	65.85	3.00e-32	126.00
IUUC-Mor-057158	Magnaporthe oryzae	66.67	6.00e-35	137.00
IUUC-Mpo-057409	Magnaporthe poae	66.67	6.00e-35	137.00
IUUC-Mtr-058505	Medicago truncatula	67.05	5.00e-36	140.00
IUUC-Mla-059071	Melampsora laricipopulina	58.72	1.00e-34	135.00
IUUC-Mga-059797	Meleagris gallopavo	64.29	1.00e-37	145.00
IUUC-Mvi-060401	Microbotryum violaceum	65.00	6.00e-38	147.00
IUUC-Mmr-061077	Microcebus murinus	64.29	1.00e-37	145.00
IUUC-Mdo-062218	Monodelphis domestica	64.29	1.00e-37	145.00
IUUC-Mmu-064224	Mus musculus	64.29	1.00e-37	145.00
IUUC-Mac-064505	Musa acuminata	67.05	7.00e-36	139.00
IUUC-Mpu-066572	Mustela putorius furo	64.29	1.00e-37	145.00
IUUC-Mlu-067821	Myotis lucifugus	64.29	1.00e-37	145.00
IUUC-Nfi-068412	Neosartorya fischeri	67.42	7.00e-36	139.00
IUUC-Nle-069309	Nomascus leucogenys	64.29	1.00e-37	145.00
IUUC-Opr-070307	Ochotona princeps	64.29	1.00e-37	145.00
IUUC-Ont-071677	Oreochromis niloticus	65.26	3.00e-37	144.00
IUUC-Oan-072926	Ornithorhynchus anatinus	66.25	2.00e-31	124.00
IUUC-Oba-075405	Oryza barthii	67.42	3.00e-36	141.00
IUUC-Obr-076843	Oryza brachyantha	67.42	1.00e-36	142.00
IUUC-Ogl-077608	Oryza glaberrima	67.42	3.00e-36	141.00
IUUC-Ogu-078316	Oryza glumaepatula	67.42	2.00e-36	141.00
IUUC-Oin-079918	Oryza indica	44.62	9.00e-30	120.00
IUUC-Olo-080968	Oryza longistaminata	58.49	3.00e-17	77.40
IUUC-Ome-081246	Oryza meridionalis	65.91	1.00e-35	139.00
IUUC-Oni-082052	Oryza nivara	67.42	3.00e-36	141.00
IUUC-Opu-084035	Oryza punctata	57.66	4.00e-38	147.00
IUUC-Oru-084941	Oryza rufipogon	67.42	3.00e-36	141.00
IUUC-Osa-085800	Oryza sativa	67.42	3.00e-36	141.00
IUUC-Ola-087352	Oryzias latipes	64.29	6.00e-38	146.00
IUUC-Olu-087676	Ostreococcus lucimarinus	50.00	1.00e-23	99.00
IUUC-Oga-088880	Otolemur garnettii	64.29	1.00e-37	145.00
IUUC-Oar-089286	Ovis aries	64.29	1.00e-37	145.00
IUUC-Ptr-091402	Pan troglodytes	64.29	1.00e-37	145.00
IUUC-Pan-091687	Papio anubis	63.27	8.00e-37	142.00
IUUC-Psi-093640	Pelodiscus sinensis	56.90	3.00e-37	144.00
IUUC-Pma-094723	Petromyzon marinus	65.06	2.00e-32	127.00
IUUC-Pno-094822	Phaeosphaeria nodorum	64.00	6.00e-38	146.00
IUUC-Ppa-095730	Physcomitrella patens	65.93	1.00e-36	142.00
IUUC-Pfo-096055	Poecilia formosa	64.29	7.00e-38	146.00
IUUC-Pab-098577	Pongo abelii	64.29	1.00e-37	145.00
IUUC-Pop-099697	Populus trichocarpa	58.49	1.00e-37	145.00
IUUC-Pca-100719	Procavia capensis	64.29	1.00e-37	145.00
IUUC-Ppe-101429	Prunus persica	64.21	6.00e-37	143.00
IUUC-Pva-102885	Pteropus vampyrus	47.96	1.00e-22	95.50
IUUC-Pgr-103470	Puccinia graminis	68.48	9.00e-38	146.00
IUUC-Ptt-103909	Puccinia triticina	58.73	7.00e-21	90.50
IUUC-Pte-104144	Pyrenophora teres	62.77	2.00e-33	131.00
IUUC-Pyt-104533	Pyrenophora triticirepentis	65.96	1.00e-36	142.00
IUUC-Rno-105912	Rattus norvegicus	64.29	1.00e-37	145.00
IUUC-Sce-106407	Saccharomyces cerevisiae	64.44	3.00e-36	141.00
IUUC-Sha-107549	Sarcophilus harrisii	64.29	1.00e-37	145.00
IUUC-Sja-108003	Schizosaccharomyces japonicus	66.67	2.00e-36	141.00
IUUC-Spo-108091	Schizosaccharomyces pombe	65.22	3.00e-36	140.00
IUUC-Ssl-108634	Sclerotinia sclerotiorum	67.82	3.00e-35	138.00
IUUC-Smo-109406	Selaginella moellendorffii	67.44	3.00e-35	137.00
IUUC-Sit-110419	Setaria italica	65.17	1.00e-35	139.00
IUUC-Sly-111256	Solanum lycopersicum	65.91	7.00e-36	139.00
IUUC-Stu-112567	Solanum tuberosum	60.95	1.00e-36	142.00
IUUC-Sar-113409	Sorex araneus	46.94	3.00e-22	94.40
IUUC-Sbi-113799	Sorghum bicolor	67.42	2.00e-36	141.00
IUUC-Sre-115142	Sporisorium reilianum	63.00	4.00e-36	140.00
IUUC-Tgu-116923	Taeniopygia guttata	64.56	4.00e-30	119.00
IUUC-Tru-117710	Takifugu rubripes	65.26	2.00e-37	144.00
IUUC-Tsy-119251	Tarsius syrichta	45.45	4.00e-21	90.90
IUUC-Tni-119934	Tetraodon nigroviridis	65.31	2.00e-38	148.00
IUUC-Tca-121820	Theobroma cacao	67.42	1.00e-36	142.00
IUUC-Tre-122212	Trichoderma reesei	64.20	1.00e-31	125.00
IUUC-Tvi-122357	Trichoderma virens	65.22	5.00e-37	143.00
IUUC-Tae-125834	Triticum aestivum	64.21	1.00e-36	142.00
IUUC-Tur-126093	Triticum urartu	67.42	3.00e-36	141.00
IUUC-Tme-126940	Tuber melanosporum	67.02	8.00e-37	142.00
IUUC-Tbe-127918	Tupaia belangeri	65.85	3.00e-32	126.00
IUUC-Ttr-128306	Tursiops truncatus	65.85	3.00e-32	126.00
IUUC-Uma-129482	Ustilago maydis	62.00	2.00e-35	138.00
IUUC-Vda-129917	Verticillium dahliae	57.63	3.00e-37	144.00
IUUC-Vpa-130142	Vicugna pacos	60.64	3.00e-32	127.00
IUUC-Vvi-131554	Vitis vinifera	64.08	1.00e-37	145.00
IUUC-Xtr-132382	Xenopus tropicalis	45.35	6.00e-21	89.40
IUUC-Xma-133061	Xiphophorus maculatus	64.29	7.00e-38	146.00
IUUC-Yli-134542	Yarrowia lipolytica	67.42	2.00e-35	138.00
IUUC-Zma-135160	Zea mays	67.42	2.00e-36	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence