iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023682

Ensembl Protein ID

ENSCSAP00000014327.1

UniProt Accession

A0A0D9S0D8; A0A0D9S0D8_CHLSB

Genbank Protein ID

ENSCSAP00000014327

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01151652

Gene Name

KDM5D

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000018314.1	ENSCSAT00000016415.1	ENSCSAP00000014327.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.40e-15	55.3	316	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C +C +g+ed+ +l+ C+ C++++H  Cl ++  +e p+   w CpkC 
   Q: 316  ICQICSRGDEDD-KLLFCDGCDDNYHIFCLLPP-LPEIPRGI-WRCPKCI 362
           7*********88.6*******************.******97.******5 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MEPGCDEFLP PPECPVFEPS WAEFQDPLGY IAKIRPVAEK AGICKIRPPA DWQPPFAVEV 60
DNFRFTPRIQ RLNELEAQTR VKLNYLDQIA KFWEIQGSSL KIPNVERRIL DLYSLSKIVM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAAAACAGT ATAGATAATT CCACACCAAA AAAAAACAGA TCATTAGCAG TGTGCTTCTT 60
CTAATTTATG GTACGTGTGT TTAGCGATGT TGAAGGTTTA CTGTCATCTG TTCAGGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0032453--F:histone demethylase activity (H3-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding
GO:0060765--P:regulation of androgen receptor signaling pathway
GO:0002457--P:T cell antigen processing and presentation

KEGG

csab:103246987

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009139	Aspergillus nidulans	31.13	1.00e-127	451.00
IUUC-Bci-013992	Botrytis cinerea	30.46	2.00e-107	384.00
IUUC-Hsa-046399	Homo sapiens	93.06	0.00e+00	2655.00
IUUC-Mcc-055474	Macaca mulatta	95.98	0.00e+00	2787.00
IUUC-Ptr-091415	Pan troglodytes	94.41	0.00e+00	2679.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence