iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118450

Ensembl Protein ID

ENSTRUP00000013292.1

UniProt Accession

H2SLK6; H2SLK6_TAKRU

Protein Name

Uncharacterized protein

Gene Name

rabgef1l; LOC101069905

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000005529.1	ENSTRUT00000013354.1	ENSTRUP00000013292.1
ENSTRUG00000005529.1	ENSTRUT00000013355.1	ENSTRUP00000013293.1
ENSTRUG00000005529.1	ENSTRUT00000013356.1	ENSTRUP00000013294.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/ZnF_A20	5.40e-14	53.1	13	46

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/ZnF_A20

   S: 1    dpskllCkkgCgfYGnpetngyCSkCyreelrrr 34
           d+s+llC kgCgfYGn ++ g CSkC+ree +r+
   Q: 13   DQSELLCTKGCGFYGNQAWRGLCSKCWREENQRE 46
           79*****************************996 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

IEMINQRRAI HVDQSELLCT KGCGFYGNQA WRGLCSKCWR EENQREKQKQ IQEDWALAER 60
SICHQCPPSV RLPDVTAVIY LSRLQREEEE AYASRQQKAQ PQPSITRFSK FEERKSKEKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGAGATGA TAAATCAGCG GCGTGCGATC CATGTGGACC AATCAGAGCT GCTCTGCACG 60
AAAGGATGTG GGTTTTATGG CAACCAGGCT TGGCGAGGCC TGTGCTCAAA GTGCTGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003123--VPS9
IPR002653--Znf_A20

PROSITE

PS51205--VPS9
PS51036--ZF_A20

Pfam

PF02204--VPS9
PF01754--zf-A20

SMART

SM00167--VPS9
SM00259--ZnF_A20

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011365	Astyanax mexicanus	60.07	3.00e-171	594.00
IUUC-Cfa-020845	Canis familiaris	61.75	4.00e-141	495.00
IUUC-Csa-023495	Chlorocebus sabaeus	62.00	8.00e-142	496.00
IUUC-Cho-025076	Choloepus hoffmanni	64.78	2.00e-126	445.00
IUUC-Cin-025400	Ciona intestinalis	38.97	2.00e-95	343.00
IUUC-Fca-035447	Felis catus	56.95	3.00e-161	561.00
IUUC-Fox-037967	Fusarium oxysporum	30.54	4.00e-18	86.70
IUUC-Ggr-039760	Gaeumannomyces graminis	40.91	5.00e-27	116.00
IUUC-Gga-040584	Gallus gallus	59.02	2.00e-160	558.00
IUUC-Gac-042469	Gasterosteus aculeatus	79.24	0.00e+00	725.00
IUUC-Meu-056084	Macropus eugenii	51.98	2.00e-61	229.00
IUUC-Mdo-062289	Monodelphis domestica	56.95	1.00e-169	589.00
IUUC-Mmu-063961	Mus musculus	64.71	4.00e-142	498.00
IUUC-Mlu-067431	Myotis lucifugus	59.50	2.00e-134	472.00
IUUC-Ncr-068843	Neurospora crassa	41.40	7.00e-28	119.00
IUUC-Opr-070790	Ochotona princeps	62.39	5.00e-37	149.00
IUUC-Ont-072144	Oreochromis niloticus	81.06	0.00e+00	746.00
IUUC-Oan-072946	Ornithorhynchus anatinus	61.17	2.00e-137	482.00
IUUC-Opu-083923	Oryza punctata	33.74	2.00e-21	96.30
IUUC-Ola-086730	Oryzias latipes	75.55	0.00e+00	664.00
IUUC-Pma-094212	Petromyzon marinus	45.31	1.00e-88	320.00
IUUC-Pfo-097510	Poecilia formosa	79.55	0.00e+00	711.00
IUUC-Pva-103225	Pteropus vampyrus	57.80	5.00e-113	401.00
IUUC-Rno-106101	Rattus norvegicus	64.97	4.00e-142	498.00
IUUC-Sha-106919	Sarcophilus harrisii	53.69	2.00e-165	576.00
IUUC-Sar-112929	Sorex araneus	67.93	4.00e-114	405.00
IUUC-Tni-120450	Tetraodon nigroviridis	82.10	0.00e+00	667.00
IUUC-Xtr-132799	Xenopus tropicalis	59.32	2.00e-156	545.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence