iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076605

Ensembl Protein ID

OB01G12660.1

UniProt Accession

J3KWB0; J3KWB0_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G12660	OB01G12660.1	OB01G12660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-18	64.6	189	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWD 29
           H+ +vtcl+f ++  + l+sG   g + +WD
   Q: 189  HERRVTCLEFhPTknNVLLSGDKKGLLGIWD 219
           999********444699************** PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MGPTTRARFV HNRRRRPGPY ASDDEEDQQE ASSSSSSSDD EEEEEEGEGS GEADDDDEAA 60
AAPSGKDEVE EEEESPVAAV RSGRKASITI SLKKVCKVCK RSGHEAGFKG AVYIDCPRKP 120

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Nucleotide Sequence
(Fasta)

ATGGGCCCCA CCACCCGCGC CCGCTTCGTC CACAACCGCC GCCGGCGGCC CGGGCCGTAC 60
GCCTCCGACG ACGAGGAGGA CCAGCAGGAA GCCTCCTCGT CTTCCTCATC CTCCGACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	87.55	0.00e+00	863.00
IUUC-Aml-002203	Ailuropoda melanoleuca	30.46	1.00e-31	129.00
IUUC-Atr-002957	Amborella trichopoda	67.46	0.00e+00	682.00
IUUC-Apl-003832	Anas platyrhynchos	31.81	9.00e-36	144.00
IUUC-Aca-004358	Anolis carolinensis	32.25	2.00e-36	145.00
IUUC-Aly-006296	Arabidopsis lyrata	68.76	0.00e+00	644.00
IUUC-Ath-007115	Arabidopsis thaliana	66.97	0.00e+00	644.00
IUUC-Ame-010817	Astyanax mexicanus	33.24	2.00e-40	159.00
IUUC-Bta-012914	Bos taurus	31.02	4.00e-34	137.00
IUUC-Bdi-014261	Brachypodium distachyon	85.17	0.00e+00	872.00
IUUC-Bol-015317	Brassica oleracea	68.62	0.00e+00	634.00
IUUC-Bra-016848	Brassica rapa	66.00	0.00e+00	634.00
IUUC-Cja-018967	Callithrix jacchus	30.06	1.00e-32	132.00
IUUC-Cfa-021238	Canis familiaris	30.91	9.00e-30	123.00
IUUC-Cpo-022063	Cavia porcellus	30.09	9.00e-32	130.00
IUUC-Csa-023382	Chlorocebus sabaeus	29.75	1.00e-31	130.00
IUUC-Cho-024931	Choloepus hoffmanni	23.50	3.00e-09	56.20
IUUC-Cin-025651	Ciona intestinalis	24.50	6.00e-18	84.70
IUUC-Dre-028732	Danio rerio	32.22	8.00e-33	134.00
IUUC-Dno-029575	Dasypus novemcinctus	26.30	2.00e-23	102.00
IUUC-Dor-030461	Dipodomys ordii	34.07	7.00e-28	117.00
IUUC-Ete-033038	Echinops telfairi	30.24	7.00e-32	130.00
IUUC-Eca-033772	Equus caballus	31.00	5.00e-32	131.00
IUUC-Eeu-035234	Erinaceus europaeus	32.89	7.00e-13	68.20
IUUC-Fca-036095	Felis catus	29.75	2.00e-29	122.00
IUUC-Fal-036986	Ficedula albicollis	27.19	3.00e-21	95.50
IUUC-Gmo-039683	Gadus morhua	30.99	1.00e-39	156.00
IUUC-Gga-040530	Gallus gallus	31.99	3.00e-36	145.00
IUUC-Gac-041517	Gasterosteus aculeatus	28.02	6.00e-29	120.00
IUUC-Gma-043378	Glycine max	66.81	0.00e+00	674.00
IUUC-Ggo-045364	Gorilla gorilla	30.37	8.00e-33	133.00
IUUC-Hsa-046354	Homo sapiens	30.37	7.00e-33	134.00
IUUC-Hvu-047151	Hordeum vulgare	85.84	5.00e-166	575.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	31.80	8.00e-34	137.00
IUUC-Lch-049718	Latimeria chalumnae	28.88	4.00e-23	102.00
IUUC-Lpe-051256	Leersia perrieri	82.74	0.00e+00	919.00
IUUC-Loc-052398	Lepisosteus oculatus	30.42	1.00e-36	146.00
IUUC-Laf-053562	Loxodonta africana	31.29	4.00e-33	134.00
IUUC-Mcc-055197	Macaca mulatta	30.58	3.00e-28	118.00
IUUC-Meu-056151	Macropus eugenii	36.89	8.00e-31	126.00
IUUC-Mtr-057940	Medicago truncatula	70.69	0.00e+00	689.00
IUUC-Mga-059923	Meleagris gallopavo	32.63	2.00e-38	152.00
IUUC-Mvi-060555	Microbotryum violaceum	21.27	7.00e-14	71.20
IUUC-Mmr-061465	Microcebus murinus	31.65	8.00e-28	116.00
IUUC-Mdo-063063	Monodelphis domestica	33.43	5.00e-40	157.00
IUUC-Mmu-064294	Mus musculus	30.21	2.00e-32	132.00
IUUC-Mac-065598	Musa acuminata	70.77	0.00e+00	706.00
IUUC-Mpu-066831	Mustela putorius furo	29.75	3.00e-28	118.00
IUUC-Mlu-067222	Myotis lucifugus	31.50	6.00e-32	130.00
IUUC-Nle-069581	Nomascus leucogenys	30.06	9.00e-33	133.00
IUUC-Opr-070644	Ochotona princeps	32.23	1.00e-36	146.00
IUUC-Ont-072605	Oreochromis niloticus	29.40	7.00e-34	137.00
IUUC-Oan-072973	Ornithorhynchus anatinus	32.84	8.00e-38	150.00
IUUC-Ocu-074615	Oryctolagus cuniculus	30.84	2.00e-34	139.00
IUUC-Oba-075283	Oryza barthii	87.31	0.00e+00	906.00
IUUC-Ogl-077512	Oryza glaberrima	88.07	0.00e+00	922.00
IUUC-Ogu-078329	Oryza glumaepatula	87.48	0.00e+00	907.00
IUUC-Oin-079980	Oryza indica	86.68	0.00e+00	894.00
IUUC-Olo-080516	Oryza longistaminata	89.37	0.00e+00	833.00
IUUC-Ome-081415	Oryza meridionalis	85.86	0.00e+00	912.00
IUUC-Oni-082985	Oryza nivara	86.68	0.00e+00	894.00
IUUC-Opu-084159	Oryza punctata	90.42	0.00e+00	904.00
IUUC-Oru-085137	Oryza rufipogon	87.90	0.00e+00	915.00
IUUC-Osa-085614	Oryza sativa	87.90	0.00e+00	914.00
IUUC-Ola-087044	Oryzias latipes	28.46	1.00e-32	133.00
IUUC-Oga-088274	Otolemur garnettii	30.98	4.00e-32	131.00
IUUC-Oar-089826	Ovis aries	30.72	7.00e-34	137.00
IUUC-Ptr-091631	Pan troglodytes	30.37	7.00e-33	134.00
IUUC-Pan-092535	Papio anubis	29.75	2.00e-32	132.00
IUUC-Psi-093815	Pelodiscus sinensis	30.56	8.00e-33	134.00
IUUC-Pma-094474	Petromyzon marinus	31.85	3.00e-35	141.00
IUUC-Ppa-095414	Physcomitrella patens	58.77	2.00e-165	575.00
IUUC-Pfo-096559	Poecilia formosa	28.65	7.00e-33	134.00
IUUC-Pab-098528	Pongo abelii	30.06	1.00e-32	133.00
IUUC-Pop-100064	Populus trichocarpa	69.00	0.00e+00	704.00
IUUC-Pca-100803	Procavia capensis	30.46	2.00e-31	129.00
IUUC-Ppe-101966	Prunus persica	68.12	0.00e+00	685.00
IUUC-Pva-103213	Pteropus vampyrus	31.61	5.00e-33	134.00
IUUC-Rno-105087	Rattus norvegicus	30.21	8.00e-33	133.00
IUUC-Sha-107466	Sarcophilus harrisii	33.23	3.00e-40	158.00
IUUC-Smo-108958	Selaginella moellendorffii	60.86	2.00e-167	580.00
IUUC-Sit-109968	Setaria italica	85.97	0.00e+00	845.00
IUUC-Sly-111495	Solanum lycopersicum	65.14	1.00e-180	625.00
IUUC-Sar-113272	Sorex araneus	31.85	4.00e-34	137.00
IUUC-Sbi-114706	Sorghum bicolor	80.16	0.00e+00	783.00
IUUC-Ssc-115437	Sus scrofa	31.08	5.00e-31	127.00
IUUC-Tgu-116602	Taeniopygia guttata	31.49	8.00e-35	140.00
IUUC-Tru-118698	Takifugu rubripes	30.28	2.00e-28	119.00
IUUC-Tsy-119027	Tarsius syrichta	29.51	2.00e-24	105.00
IUUC-Tni-119787	Tetraodon nigroviridis	28.84	5.00e-37	147.00
IUUC-Tca-121447	Theobroma cacao	69.39	0.00e+00	678.00
IUUC-Tae-123253	Triticum aestivum	87.50	0.00e+00	885.00
IUUC-Tur-126724	Triticum urartu	87.58	0.00e+00	875.00
IUUC-Tbe-127680	Tupaia belangeri	29.43	7.00e-25	107.00
IUUC-Ttr-129123	Tursiops truncatus	26.02	3.00e-17	82.40
IUUC-Vpa-130437	Vicugna pacos	27.04	8.00e-22	97.80
IUUC-Vvi-131001	Vitis vinifera	70.09	0.00e+00	701.00
IUUC-Xtr-132266	Xenopus tropicalis	34.15	3.00e-41	161.00
IUUC-Xma-133034	Xiphophorus maculatus	29.40	4.00e-33	135.00
IUUC-Yli-134341	Yarrowia lipolytica	22.94	1.00e-14	73.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence