iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109968

Ensembl Protein ID

Si000798m

UniProt Accession

K3XFX9; K3XFX9_SETIT

Genbank Protein ID

KQL04332.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003532

Gene Name

LOC101786903; SETIT_000798mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si000798m.g	Si000798m	Si000798m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-16	61.0	194	225

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           H+ +vtcl+f ++  + l+sG   g + +WD+
   Q: 194  HQRRVTCLEFhPTknNVLLSGDKKGLLGIWDY 225
           999********444699**************7 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MGPTTRTQFV YNRRRRRRSG GRRAVEEASD EEEQRQDTSS SSSDDEGDEE EEAEASGEEV 60
DDDDVEEVEE EAAAAEPAAK ERPEKRGGRK GPITISLKKV CKVCKRTGHE AGFKGAVYID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCCCCA CAACCCGCAC CCAGTTCGTC TACAACCGCC GCCGCCGCCG CCGCAGCGGC 60
GGGCGGCGCG CCGTCGAGGA GGCCTCCGAC GAAGAGGAGC AGCGGCAAGA CACCTCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

KEGG

sita:101761501

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	89.03	0.00e+00	875.00
IUUC-Aml-002203	Ailuropoda melanoleuca	29.01	2.00e-28	119.00
IUUC-Atr-002957	Amborella trichopoda	66.67	0.00e+00	673.00
IUUC-Apl-003832	Anas platyrhynchos	30.27	4.00e-33	135.00
IUUC-Aca-004358	Anolis carolinensis	31.67	3.00e-35	142.00
IUUC-Aly-006296	Arabidopsis lyrata	65.98	0.00e+00	634.00
IUUC-Ath-007115	Arabidopsis thaliana	64.97	0.00e+00	637.00
IUUC-Ame-010817	Astyanax mexicanus	33.44	9.00e-39	154.00
IUUC-Bta-012914	Bos taurus	29.97	8.00e-32	130.00
IUUC-Bdi-014261	Brachypodium distachyon	89.82	0.00e+00	908.00
IUUC-Bol-015317	Brassica oleracea	66.59	0.00e+00	631.00
IUUC-Bra-016848	Brassica rapa	65.34	0.00e+00	630.00
IUUC-Cja-018967	Callithrix jacchus	29.54	2.00e-30	125.00
IUUC-Cfa-021238	Canis familiaris	28.79	4.00e-27	115.00
IUUC-Cpo-022063	Cavia porcellus	29.54	7.00e-30	124.00
IUUC-Csa-023382	Chlorocebus sabaeus	29.23	2.00e-29	122.00
IUUC-Cho-024931	Choloepus hoffmanni	30.69	2.00e-08	53.50
IUUC-Dre-028732	Danio rerio	29.43	6.00e-31	127.00
IUUC-Dor-030461	Dipodomys ordii	34.51	7.00e-28	117.00
IUUC-Ete-033038	Echinops telfairi	28.88	4.00e-29	121.00
IUUC-Eca-033772	Equus caballus	30.25	3.00e-29	122.00
IUUC-Eeu-035234	Erinaceus europaeus	31.58	8.00e-13	68.20
IUUC-Fca-036095	Felis catus	28.09	2.00e-26	112.00
IUUC-Gmo-039683	Gadus morhua	30.34	8.00e-38	150.00
IUUC-Gga-040530	Gallus gallus	30.19	1.00e-33	137.00
IUUC-Gac-041517	Gasterosteus aculeatus	29.19	6.00e-29	121.00
IUUC-Gma-043378	Glycine max	68.05	0.00e+00	689.00
IUUC-Ggo-045364	Gorilla gorilla	29.85	2.00e-30	126.00
IUUC-Hsa-046354	Homo sapiens	29.85	2.00e-30	126.00
IUUC-Hvu-047151	Hordeum vulgare	85.59	5.00e-165	572.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	30.77	2.00e-31	129.00
IUUC-Lpe-051256	Leersia perrieri	85.49	0.00e+00	873.00
IUUC-Loc-052398	Lepisosteus oculatus	30.73	8.00e-35	140.00
IUUC-Laf-053562	Loxodonta africana	29.63	3.00e-30	125.00
IUUC-Mcc-055197	Macaca mulatta	29.86	3.00e-26	112.00
IUUC-Meu-056151	Macropus eugenii	35.56	1.00e-28	119.00
IUUC-Mtr-057940	Medicago truncatula	70.40	0.00e+00	695.00
IUUC-Mga-059923	Meleagris gallopavo	32.08	8.00e-36	144.00
IUUC-Mmr-061465	Microcebus murinus	30.32	2.00e-25	109.00
IUUC-Mdo-063063	Monodelphis domestica	31.71	1.00e-36	146.00
IUUC-Mmu-064294	Mus musculus	30.56	1.00e-30	127.00
IUUC-Mac-065598	Musa acuminata	71.46	0.00e+00	709.00
IUUC-Mpu-066831	Mustela putorius furo	27.38	6.00e-26	111.00
IUUC-Mlu-067222	Myotis lucifugus	30.15	3.00e-29	122.00
IUUC-Nle-069581	Nomascus leucogenys	29.54	2.00e-30	125.00
IUUC-Opr-070644	Ochotona princeps	31.12	1.00e-32	133.00
IUUC-Ont-072605	Oreochromis niloticus	28.34	1.00e-31	130.00
IUUC-Oan-072973	Ornithorhynchus anatinus	32.34	2.00e-35	142.00
IUUC-Ocu-074615	Oryctolagus cuniculus	29.94	1.00e-31	130.00
IUUC-Oba-075283	Oryza barthii	87.55	0.00e+00	846.00
IUUC-Obr-076605	Oryza brachyantha	87.98	0.00e+00	899.00
IUUC-Ogl-077512	Oryza glaberrima	88.65	0.00e+00	862.00
IUUC-Ogu-078329	Oryza glumaepatula	87.75	0.00e+00	845.00
IUUC-Oin-079980	Oryza indica	87.55	0.00e+00	845.00
IUUC-Olo-080516	Oryza longistaminata	88.34	0.00e+00	817.00
IUUC-Ome-081415	Oryza meridionalis	87.55	0.00e+00	857.00
IUUC-Oni-082985	Oryza nivara	87.55	0.00e+00	845.00
IUUC-Opu-084159	Oryza punctata	87.60	0.00e+00	879.00
IUUC-Oru-085137	Oryza rufipogon	88.80	0.00e+00	866.00
IUUC-Osa-085614	Oryza sativa	88.80	0.00e+00	866.00
IUUC-Ola-087044	Oryzias latipes	26.81	2.00e-31	129.00
IUUC-Oga-088274	Otolemur garnettii	29.94	1.00e-29	123.00
IUUC-Oar-089826	Ovis aries	29.46	2.00e-31	129.00
IUUC-Ptr-091631	Pan troglodytes	29.85	2.00e-30	126.00
IUUC-Pan-092535	Papio anubis	29.23	4.00e-30	125.00
IUUC-Psi-093815	Pelodiscus sinensis	28.49	4.00e-31	128.00
IUUC-Pma-094474	Petromyzon marinus	31.82	1.00e-34	140.00
IUUC-Ppa-095414	Physcomitrella patens	59.23	8.00e-165	573.00
IUUC-Pfo-096559	Poecilia formosa	28.37	3.00e-32	132.00
IUUC-Pab-098528	Pongo abelii	29.54	2.00e-30	125.00
IUUC-Pop-100064	Populus trichocarpa	69.65	0.00e+00	712.00
IUUC-Pca-100803	Procavia capensis	29.01	7.00e-29	120.00
IUUC-Ppe-101966	Prunus persica	68.10	0.00e+00	692.00
IUUC-Pva-103213	Pteropus vampyrus	30.15	2.00e-30	126.00
IUUC-Rno-105087	Rattus norvegicus	30.58	3.00e-31	128.00
IUUC-Sha-107466	Sarcophilus harrisii	32.62	3.00e-37	148.00
IUUC-Smo-108958	Selaginella moellendorffii	59.05	1.00e-166	578.00
IUUC-Sly-111495	Solanum lycopersicum	66.82	0.00e+00	635.00
IUUC-Sar-113272	Sorex araneus	31.53	1.00e-31	129.00
IUUC-Sbi-114706	Sorghum bicolor	90.42	0.00e+00	855.00
IUUC-Ssc-115437	Sus scrofa	30.25	2.00e-28	119.00
IUUC-Tgu-116602	Taeniopygia guttata	30.09	4.00e-31	128.00
IUUC-Tru-118698	Takifugu rubripes	29.88	3.00e-27	115.00
IUUC-Tsy-119027	Tarsius syrichta	29.62	2.00e-22	99.40
IUUC-Tni-119787	Tetraodon nigroviridis	27.72	8.00e-35	140.00
IUUC-Tca-121447	Theobroma cacao	70.57	0.00e+00	690.00
IUUC-Tae-123253	Triticum aestivum	88.24	0.00e+00	905.00
IUUC-Tur-126724	Triticum urartu	89.43	0.00e+00	889.00
IUUC-Tbe-127680	Tupaia belangeri	28.72	4.00e-23	101.00
IUUC-Vvi-131001	Vitis vinifera	70.11	0.00e+00	708.00
IUUC-Xtr-132266	Xenopus tropicalis	30.53	1.00e-40	160.00
IUUC-Xma-133034	Xiphophorus maculatus	29.48	8.00e-33	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence