iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001245

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

ACTA01083747

Gene Name

WDR3; PANDA_013956

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000004339.1	ENSAMET00000004807.1	ENSAMEP00000004620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-42	140.8	673	703
UBD/Beta-Prp	1.80e-92	309.8	550	710

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +++cla  ++ +++vs+s+D+++++W+
   Q: 673  GHHQEIWCLAVsPSgDYVVSSSHDKSLRLWE 703
           78899*******666***************8 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++v++ v +sp+++lla++  d t+k++ v+t k++ sl+gh+ +v ++++s dg +++tgs Dr++k+w l+ g+c  +l +h+dsv+
   Q: 550  EDVLC-VSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVM 637
           34555.*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
            l+f p+++ + ++++d  i+ wd ++ + ++ tl+gh++ ++c++v+p+g+++vs+s D+ +rlW   ++ l+
   Q: 638  YLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQ-TLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLI 710
           ********************************.*********************************98555444 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGLKQEVTC LCPSPDGLHL AVGYEDGSIR IFSLLSGEGN VTFNGHKAAI TSLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCTCA CGAAGCAGTA CCTACGCTAT GTTGCCAGTG CAGTCTTTGG CCTTATTGGC 60
AGCCAAAAAG GTAATATTGT CTTTGTGACA CTTCGTGGTG AAAAAGGACG CTATGTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

KEGG

aml:100479258

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	38.26	2.00e-148	519.00
IUUC-Atr-002700	Amborella trichopoda	38.67	1.00e-172	600.00
IUUC-Apl-004164	Anas platyrhynchos	78.69	0.00e+00	1076.00
IUUC-Aca-004765	Anolis carolinensis	75.46	0.00e+00	1397.00
IUUC-Aly-006503	Arabidopsis lyrata	39.41	4.00e-177	615.00
IUUC-Ath-006848	Arabidopsis thaliana	39.05	7.00e-179	621.00
IUUC-Ago-007909	Ashbya gossypii	35.54	3.00e-145	509.00
IUUC-Acl-008238	Aspergillus clavatus	38.81	5.00e-180	624.00
IUUC-Afl-008544	Aspergillus flavus	38.95	3.00e-176	612.00
IUUC-Afu-008868	Aspergillus fumigatus	38.72	1.00e-177	617.00
IUUC-Ani-009367	Aspergillus nidulans	38.15	4.00e-173	602.00
IUUC-Ang-009732	Aspergillus niger	39.40	5.00e-179	621.00
IUUC-Aor-010140	Aspergillus oryzae	39.02	1.00e-176	613.00
IUUC-Ate-010572	Aspergillus terreus	38.16	7.00e-175	608.00
IUUC-Ame-010956	Astyanax mexicanus	73.23	0.00e+00	809.00
IUUC-Bgr-012296	Blumeria graminis	37.55	4.00e-170	592.00
IUUC-Bta-012716	Bos taurus	94.80	0.00e+00	1723.00
IUUC-Bci-013699	Botrytis cinerea	37.13	9.00e-161	560.00
IUUC-Bdi-014525	Brachypodium distachyon	37.12	2.00e-159	556.00
IUUC-Bol-015117	Brassica oleracea	38.72	2.00e-170	592.00
IUUC-Bra-016869	Brassica rapa	38.72	4.00e-172	598.00
IUUC-Cel-018570	Caenorhabditis elegans	34.20	4.00e-133	468.00
IUUC-Cja-019425	Callithrix jacchus	93.33	0.00e+00	1669.00
IUUC-Cfa-020787	Canis familiaris	97.03	0.00e+00	1754.00
IUUC-Cpo-021729	Cavia porcellus	94.12	0.00e+00	1196.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.46	1.00e-105	377.00
IUUC-Csa-024098	Chlorocebus sabaeus	94.38	0.00e+00	1686.00
IUUC-Cho-024495	Choloepus hoffmanni	78.72	0.00e+00	957.00
IUUC-Cin-025245	Ciona intestinalis	48.46	1.00e-167	582.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	39.19	8.00e-166	577.00
IUUC-Cne-026835	Cryptococcus neoformans	45.89	5.00e-128	452.00
IUUC-Cme-027162	Cyanidioschyzon merolae	28.38	2.00e-38	154.00
IUUC-Dre-027874	Danio rerio	70.61	0.00e+00	1285.00
IUUC-Dno-028905	Dasypus novemcinctus	92.58	0.00e+00	1686.00
IUUC-Dor-030383	Dipodomys ordii	88.45	0.00e+00	818.00
IUUC-Dse-031297	Dothistroma septosporum	37.43	1.00e-163	570.00
IUUC-Dme-031956	Drosophila melanogaster	41.75	0.00e+00	665.00
IUUC-Ete-032608	Echinops telfairi	82.36	0.00e+00	931.00
IUUC-Eca-034181	Equus caballus	94.17	0.00e+00	1669.00
IUUC-Eeu-034495	Erinaceus europaeus	93.27	0.00e+00	1615.00
IUUC-Fca-035994	Felis catus	96.82	0.00e+00	1625.00
IUUC-Fal-036611	Ficedula albicollis	77.55	0.00e+00	1342.00
IUUC-Fox-037807	Fusarium oxysporum	37.66	4.00e-168	585.00
IUUC-Fso-038090	Fusarium solani	37.41	1.00e-164	573.00
IUUC-Gmo-039018	Gadus morhua	64.13	0.00e+00	698.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.19	5.00e-167	582.00
IUUC-Gga-040707	Gallus gallus	79.57	0.00e+00	1368.00
IUUC-Gac-042334	Gasterosteus aculeatus	64.29	0.00e+00	687.00
IUUC-Gma-043860	Glycine max	37.45	3.00e-168	585.00
IUUC-Ggo-045334	Gorilla gorilla	94.50	0.00e+00	1648.00
IUUC-Hsa-046996	Homo sapiens	94.59	0.00e+00	1649.00
IUUC-Hvu-047381	Hordeum vulgare	33.50	7.00e-88	318.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	93.11	0.00e+00	1657.00
IUUC-Kpa-049185	Komagataella pastoris	35.29	6.00e-151	528.00
IUUC-Lch-050098	Latimeria chalumnae	67.74	0.00e+00	1149.00
IUUC-Lpe-050710	Leersia perrieri	36.51	2.00e-161	563.00
IUUC-Loc-052745	Lepisosteus oculatus	69.07	0.00e+00	1203.00
IUUC-Lma-053104	Leptosphaeria maculans	38.20	2.00e-172	600.00
IUUC-Laf-054395	Loxodonta africana	92.05	0.00e+00	1645.00
IUUC-Mcc-055077	Macaca mulatta	94.38	0.00e+00	1682.00
IUUC-Meu-056418	Macropus eugenii	83.16	0.00e+00	747.00
IUUC-Mor-057031	Magnaporthe oryzae	38.08	2.00e-154	539.00
IUUC-Mpo-057420	Magnaporthe poae	37.42	1.00e-164	573.00
IUUC-Mtr-057838	Medicago truncatula	38.01	1.00e-178	620.00
IUUC-Mla-058854	Melampsora laricipopulina	36.79	4.00e-157	548.00
IUUC-Mga-060120	Meleagris gallopavo	74.81	0.00e+00	1272.00
IUUC-Mvi-060407	Microbotryum violaceum	44.89	4.00e-137	482.00
IUUC-Mmr-060635	Microcebus murinus	92.27	0.00e+00	1635.00
IUUC-Mdo-063023	Monodelphis domestica	87.78	0.00e+00	1623.00
IUUC-Mmu-064103	Mus musculus	90.15	0.00e+00	1629.00
IUUC-Mac-065569	Musa acuminata	37.78	3.00e-169	588.00
IUUC-Mpu-066462	Mustela putorius furo	97.24	0.00e+00	1752.00
IUUC-Mlu-067894	Myotis lucifugus	93.85	0.00e+00	1703.00
IUUC-Nfi-068321	Neosartorya fischeri	38.79	4.00e-177	615.00
IUUC-Ncr-068661	Neurospora crassa	38.34	3.00e-168	585.00
IUUC-Nle-069409	Nomascus leucogenys	94.38	0.00e+00	1658.00
IUUC-Opr-070445	Ochotona princeps	83.28	0.00e+00	1520.00
IUUC-Ont-072339	Oreochromis niloticus	69.70	0.00e+00	1244.00
IUUC-Oan-073688	Ornithorhynchus anatinus	77.77	0.00e+00	1371.00
IUUC-Ocu-074227	Oryctolagus cuniculus	94.59	0.00e+00	1708.00
IUUC-Oba-075635	Oryza barthii	36.12	2.00e-154	540.00
IUUC-Obr-076897	Oryza brachyantha	37.16	3.00e-166	579.00
IUUC-Ogl-077555	Oryza glaberrima	36.01	5.00e-154	538.00
IUUC-Ogu-078724	Oryza glumaepatula	36.12	1.00e-155	543.00
IUUC-Oin-080030	Oryza indica	36.12	2.00e-154	540.00
IUUC-Olo-080687	Oryza longistaminata	34.30	4.00e-143	502.00
IUUC-Ome-081867	Oryza meridionalis	36.85	5.00e-156	545.00
IUUC-Oni-082559	Oryza nivara	36.12	1.00e-154	540.00
IUUC-Opu-083332	Oryza punctata	38.76	3.00e-145	509.00
IUUC-Oru-084455	Oryza rufipogon	36.12	2.00e-154	540.00
IUUC-Osa-085793	Oryza sativa	36.12	2.00e-154	540.00
IUUC-Ola-087395	Oryzias latipes	67.89	0.00e+00	1147.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.25	5.00e-156	545.00
IUUC-Oga-088574	Otolemur garnettii	93.85	0.00e+00	1699.00
IUUC-Oar-089453	Ovis aries	92.80	0.00e+00	1700.00
IUUC-Ptr-090694	Pan troglodytes	94.49	0.00e+00	1645.00
IUUC-Pan-092420	Papio anubis	94.18	0.00e+00	1677.00
IUUC-Psi-093683	Pelodiscus sinensis	83.53	0.00e+00	1503.00
IUUC-Pma-094197	Petromyzon marinus	57.46	1.00e-71	262.00
IUUC-Pno-094783	Phaeosphaeria nodorum	37.24	8.00e-171	594.00
IUUC-Ppa-095208	Physcomitrella patens	39.14	1.00e-173	603.00
IUUC-Pfo-096299	Poecilia formosa	69.40	0.00e+00	1259.00
IUUC-Pab-098706	Pongo abelii	94.17	0.00e+00	1652.00
IUUC-Pop-099275	Populus trichocarpa	37.55	2.00e-169	589.00
IUUC-Pca-100796	Procavia capensis	77.74	0.00e+00	1256.00
IUUC-Ppe-101861	Prunus persica	39.54	6.00e-179	621.00
IUUC-Pva-103241	Pteropus vampyrus	88.04	0.00e+00	1511.00
IUUC-Pgr-103432	Puccinia graminis	43.24	3.00e-118	419.00
IUUC-Ptt-103742	Puccinia triticina	40.20	9.00e-105	374.00
IUUC-Pte-104069	Pyrenophora teres	37.94	5.00e-163	568.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.57	3.00e-170	592.00
IUUC-Rno-105219	Rattus norvegicus	89.83	0.00e+00	1587.00
IUUC-Sce-106271	Saccharomyces cerevisiae	36.97	6.00e-158	551.00
IUUC-Sha-107550	Sarcophilus harrisii	87.45	0.00e+00	1616.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	37.91	1.00e-160	560.00
IUUC-Spo-108239	Schizosaccharomyces pombe	38.32	2.00e-169	589.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	38.10	3.00e-166	579.00
IUUC-Smo-108974	Selaginella moellendorffii	39.04	1.00e-168	587.00
IUUC-Sit-110000	Setaria italica	37.93	6.00e-158	551.00
IUUC-Sly-111595	Solanum lycopersicum	38.04	5.00e-176	611.00
IUUC-Stu-112516	Solanum tuberosum	37.80	5.00e-175	608.00
IUUC-Sar-113195	Sorex araneus	83.30	0.00e+00	1329.00
IUUC-Sbi-114465	Sorghum bicolor	36.51	6.00e-165	574.00
IUUC-Sre-115006	Sporisorium reilianum	35.28	2.00e-149	523.00
IUUC-Ssc-115929	Sus scrofa	93.96	0.00e+00	1650.00
IUUC-Tgu-117282	Taeniopygia guttata	77.77	0.00e+00	1341.00
IUUC-Tru-118406	Takifugu rubripes	68.29	0.00e+00	1197.00
IUUC-Tsy-119170	Tarsius syrichta	91.96	0.00e+00	1664.00
IUUC-Tni-119721	Tetraodon nigroviridis	67.06	0.00e+00	1174.00
IUUC-Tca-121761	Theobroma cacao	38.73	2.00e-179	622.00
IUUC-Tre-121908	Trichoderma reesei	36.94	2.00e-164	573.00
IUUC-Tvi-122547	Trichoderma virens	37.78	2.00e-167	582.00
IUUC-Tae-125496	Triticum aestivum	37.94	2.00e-161	563.00
IUUC-Tur-126811	Triticum urartu	39.18	2.00e-161	563.00
IUUC-Tme-126987	Tuber melanosporum	38.32	2.00e-174	606.00
IUUC-Tbe-127315	Tupaia belangeri	95.20	0.00e+00	884.00
IUUC-Ttr-129165	Tursiops truncatus	85.58	0.00e+00	1451.00
IUUC-Uma-129651	Ustilago maydis	34.91	2.00e-148	520.00
IUUC-Vda-129973	Verticillium dahliae	39.11	2.00e-161	563.00
IUUC-Vpa-130163	Vicugna pacos	85.59	0.00e+00	747.00
IUUC-Vvi-131402	Vitis vinifera	36.47	4.00e-175	608.00
IUUC-Xtr-132296	Xenopus tropicalis	72.84	0.00e+00	1307.00
IUUC-Xma-133028	Xiphophorus maculatus	69.36	0.00e+00	1267.00
IUUC-Yli-134484	Yarrowia lipolytica	37.73	3.00e-153	535.00
IUUC-Zma-135938	Zea mays	35.79	2.00e-163	569.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence