iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108997

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377642

Gene Name

SELMODRAFT_125093

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_125093	EFJ11988	EFJ11988

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-28	95.8	310	348
UBD/Beta-Prp	5.20e-50	171.0	266	546

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +++f ++   l+s+s+D+t+kvW++ +  +++
   Q: 310  GHKSWVAGIDFhPNgMQLSSSSGDCTVKVWSFEKACCIH 348
           8***********77688**************99988877 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
           ++ h+ +i+ v  +p+k++ +t+s+d+t + w +  g+l+ +  gh++ v+ ++f+p+g  l ++s D t+kvw++++ +c+ht++ h++ v+ +s++ sg
   Q: 266  FKGHTMPISNVVLHPKKPVGVTASDDSTWQMWGLPAGDLIMTGDGHKSWVAGIDFHPNGMQLSSSSGDCTVKVWSFEKACCIHTFSDHTQAVWGVSYHNSG 366
           4557779999999**********************************************99999999********************************** PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
           ++l+s+s d t+r+wdl    c   tl+gh ++vn+  ++p +++l ++s D+tv lWd ++  +++t+ g h++s ++ +fd++g+ +vs++ +g vk+w
   Q: 367  EVLASASMDHTARIWDL----CRG-TLRGHVDSVNGCIWQPYNSILCTASSDKTVSLWDARSSLCVQTFYG-HQSSCNHAAFDPKGETVVSVDANGIVKIW 461
           ***************77....555.999*****************************************99.***************************** PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           d+++     t      + +  ++++ +  ++ +ssD +i+++  +    +++ +q+h + v +v + +  ++++v++++d++++iw
   Q: 462  DIRKVAEYATIDVGPHPANKCAVDKSGYVVAIASSDSTIKCFqTYGEVVPIREFQGHTDAVQAVVF-DRAGKYMVSAGSDCTFRIW 546
           ***555444444444445555555557777777777777777444555567777777777777777.7777777777777777777 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MLGTDKPFLL CFLSGTQFRG PGKGKQGTDA AVTRKPEVAD DFVRNFLIRM GMTKTVATFE 60
TEWYQIREKK RILDSQIGLV PDEYVRSMKQ DEIVTSLQHQ LKQANLLAQY RHEMLEKLRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGGTA CGGACAAACC CTTCCTTTTG TGTTTTCTTT CTGGAACACA GTTCCGTGGT 60
CCAGGCAAAG GCAAGCAAGG GACGGATGCC GCCGTCACGC GCAAGCCGGA AGTTGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_125093

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003836	Anas platyrhynchos	56.10	9.00e-51	191.00
IUUC-Aca-004890	Anolis carolinensis	36.40	1.00e-98	353.00
IUUC-Ame-011811	Astyanax mexicanus	40.45	9.00e-124	436.00
IUUC-Cfa-020939	Canis familiaris	44.94	3.00e-40	156.00
IUUC-Cpo-022422	Cavia porcellus	43.88	1.00e-60	225.00
IUUC-Cre-022910	Chlamydomonas reinhardtii	32.27	1.00e-58	219.00
IUUC-Cho-024331	Choloepus hoffmanni	37.83	8.00e-105	373.00
IUUC-Cin-025207	Ciona intestinalis	45.15	9.00e-137	479.00
IUUC-Csv-026299	Ciona savignyi	42.48	3.00e-122	431.00
IUUC-Dre-028682	Danio rerio	41.85	1.00e-125	442.00
IUUC-Dor-030289	Dipodomys ordii	37.21	4.00e-69	254.00
IUUC-Ete-032579	Echinops telfairi	36.88	5.00e-105	374.00
IUUC-Eca-033907	Equus caballus	36.77	4.00e-89	321.00
IUUC-Eeu-034723	Erinaceus europaeus	43.17	1.00e-53	203.00
IUUC-Fca-036062	Felis catus	38.27	3.00e-95	341.00
IUUC-Fal-036929	Ficedula albicollis	40.47	6.00e-66	243.00
IUUC-Gmo-039703	Gadus morhua	33.06	1.00e-63	236.00
IUUC-Gga-040394	Gallus gallus	37.70	1.00e-101	363.00
IUUC-Gac-041652	Gasterosteus aculeatus	37.88	1.00e-96	345.00
IUUC-Hsa-046165	Homo sapiens	38.64	5.00e-107	380.00
IUUC-Lch-049436	Latimeria chalumnae	41.68	2.00e-125	441.00
IUUC-Loc-052062	Lepisosteus oculatus	51.20	1.00e-89	322.00
IUUC-Mcc-054825	Macaca mulatta	38.83	8.00e-109	387.00
IUUC-Mmu-063303	Mus musculus	36.85	3.00e-104	371.00
IUUC-Mpu-066714	Mustela putorius furo	44.55	1.00e-57	215.00
IUUC-Nle-069920	Nomascus leucogenys	45.00	5.00e-59	219.00
IUUC-Opr-070273	Ochotona princeps	36.50	3.00e-101	361.00
IUUC-Ont-072313	Oreochromis niloticus	37.03	3.00e-103	367.00
IUUC-Ptr-091332	Pan troglodytes	38.45	2.00e-106	379.00
IUUC-Psi-093988	Pelodiscus sinensis	50.00	2.00e-82	298.00
IUUC-Pma-094595	Petromyzon marinus	40.11	4.00e-128	451.00
IUUC-Ppa-095608	Physcomitrella patens	56.63	8.00e-180	622.00
IUUC-Pfo-097048	Poecilia formosa	39.88	3.00e-68	250.00
IUUC-Pab-097856	Pongo abelii	35.80	3.00e-88	318.00
IUUC-Pca-100171	Procavia capensis	41.81	1.00e-56	213.00
IUUC-Pva-103088	Pteropus vampyrus	32.83	5.00e-84	304.00
IUUC-Rno-105955	Rattus norvegicus	42.18	5.00e-66	243.00
IUUC-Sar-113008	Sorex araneus	33.02	8.00e-80	290.00
IUUC-Tgu-116809	Taeniopygia guttata	49.38	2.00e-43	167.00
IUUC-Tsy-119183	Tarsius syrichta	42.55	3.00e-64	238.00
IUUC-Tbe-127666	Tupaia belangeri	29.77	3.00e-36	145.00
IUUC-Vpa-130702	Vicugna pacos	44.49	6.00e-55	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence