iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000009824.1	ENSPSIT00000011154.1	ENSPSIP00000011098.1
ENSPSIG00000009824.1	ENSPSIT00000011169.1	ENSPSIP00000011113.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-55	180.8	584	623
UBD/Beta-Prp	2.40e-67	227.2	491	659

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v++l + ++   ll+sGs+D ti+vWD+r+g++l 
   Q: 584  GHTAPVRGLMWnTEipYLLISGSWDYTIRVWDTRDGTCLD 623
           8**********85573668*******************86 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgk.ilvtgseDrtikvw..dlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqc 128
           +l++ ++h a+v  +++s++ k +++tg eD++++v+    s+ +++ +++gh+++v  +++sp     l sGs+d t+r+wd  ++ c
   Q: 491  VLHK-YKHPAAVFGCDWSQNNKdMIATGCEDKNVRVYylATSSDQPLKVFTGHTAKVFHVRWSPlREGILCSGSDDGTVRIWDYTQDAC 578
           4443.789999999999988777**************77778999*******************666********************** PP
   S: 129  leetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdl 209
           ++ +lsgh++ v+++ ++ +   ll+sGs D t+r+Wd + g++l+t    h  +vy l+ ++++ + ++s+s+d+tv+lw+l
   Q: 579  IN-VLSGHTAPVRGLMWNTEIpYLLISGSWDYTIRVWDTRDGTCLDTVYD-HGADVYGLTCHPSRpFTMASCSRDSTVRLWSL 659
           *9.******************99*************************87.*********99999899*************98 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSQVKQVGLL AAGCQPWNKD VCVASGDRFA YCATLAIYIY QLDHRYNEFK LRAIMSEHKK 60
TITAISWCPH NPDMFASASA DNLVIIWNVA EQKAIAKLDN TKGVPASLSW CWNAGDAVAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGCCGCCC GGGGCCCCGC GCATGTGAAG CCCCGCCCCC GGAATCGGGC CCCGCGCTCA 60
GTAGAGCCGG CCCTGGGGGA GGGGTCCTGG TTATGAATGA GCACAGTGGA TTGTTCTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001190	Ailuropoda melanoleuca	86.39	0.00e+00	2371.00
IUUC-Apl-003326	Anas platyrhynchos	92.04	0.00e+00	2472.00
IUUC-Aca-004349	Anolis carolinensis	89.87	0.00e+00	2410.00
IUUC-Ame-011366	Astyanax mexicanus	64.04	0.00e+00	1554.00
IUUC-Bta-013275	Bos taurus	86.23	0.00e+00	2362.00
IUUC-Cja-018970	Callithrix jacchus	84.70	0.00e+00	2310.00
IUUC-Cfa-021237	Canis familiaris	85.18	0.00e+00	2338.00
IUUC-Cpo-021342	Cavia porcellus	81.34	0.00e+00	1562.00
IUUC-Cre-022569	Chlamydomonas reinhardtii	28.59	9.00e-82	298.00
IUUC-Csa-023687	Chlorocebus sabaeus	86.00	0.00e+00	2347.00
IUUC-Cho-024772	Choloepus hoffmanni	76.19	0.00e+00	757.00
IUUC-Csv-026021	Ciona savignyi	41.04	0.00e+00	1037.00
IUUC-Dre-028031	Danio rerio	85.64	0.00e+00	2295.00
IUUC-Dno-029369	Dasypus novemcinctus	82.63	0.00e+00	2173.00
IUUC-Dor-030645	Dipodomys ordii	82.55	0.00e+00	2234.00
IUUC-Ete-032530	Echinops telfairi	80.65	0.00e+00	2164.00
IUUC-Eca-034405	Equus caballus	86.72	0.00e+00	2360.00
IUUC-Eeu-035006	Erinaceus europaeus	83.04	0.00e+00	999.00
IUUC-Fca-035965	Felis catus	86.32	0.00e+00	2347.00
IUUC-Fal-037136	Ficedula albicollis	88.85	0.00e+00	2356.00
IUUC-Gmo-039293	Gadus morhua	78.73	0.00e+00	2034.00
IUUC-Gga-040931	Gallus gallus	88.63	0.00e+00	2351.00
IUUC-Gac-042493	Gasterosteus aculeatus	77.85	0.00e+00	2096.00
IUUC-Ggo-045540	Gorilla gorilla	86.18	0.00e+00	2357.00
IUUC-Hsa-046708	Homo sapiens	85.63	0.00e+00	2342.00
IUUC-Lch-050135	Latimeria chalumnae	87.15	0.00e+00	1824.00
IUUC-Loc-051730	Lepisosteus oculatus	88.10	0.00e+00	2377.00
IUUC-Laf-053743	Loxodonta africana	86.77	0.00e+00	2343.00
IUUC-Mcc-055590	Macaca mulatta	85.69	0.00e+00	2332.00
IUUC-Meu-056328	Macropus eugenii	68.09	0.00e+00	1662.00
IUUC-Mga-059877	Meleagris gallopavo	86.85	0.00e+00	2336.00
IUUC-Mmr-060756	Microcebus murinus	86.93	0.00e+00	2362.00
IUUC-Mdo-062749	Monodelphis domestica	87.70	0.00e+00	2390.00
IUUC-Mmu-063668	Mus musculus	82.78	0.00e+00	2268.00
IUUC-Mpu-066856	Mustela putorius furo	85.69	0.00e+00	2308.00
IUUC-Mlu-067186	Myotis lucifugus	81.90	0.00e+00	2246.00
IUUC-Nle-070018	Nomascus leucogenys	85.24	0.00e+00	2331.00
IUUC-Ont-071482	Oreochromis niloticus	73.31	0.00e+00	1942.00
IUUC-Oan-073065	Ornithorhynchus anatinus	87.26	0.00e+00	1809.00
IUUC-Ocu-073786	Oryctolagus cuniculus	85.77	0.00e+00	2344.00
IUUC-Oga-088545	Otolemur garnettii	80.90	0.00e+00	2183.00
IUUC-Oar-090205	Ovis aries	85.69	0.00e+00	2326.00
IUUC-Ptr-091092	Pan troglodytes	85.47	0.00e+00	2338.00
IUUC-Pan-092430	Papio anubis	85.85	0.00e+00	2341.00
IUUC-Pfo-097414	Poecilia formosa	78.57	0.00e+00	2050.00
IUUC-Pab-097853	Pongo abelii	85.78	0.00e+00	2341.00
IUUC-Pca-100440	Procavia capensis	68.56	0.00e+00	697.00
IUUC-Pva-102838	Pteropus vampyrus	83.70	0.00e+00	2275.00
IUUC-Rno-104951	Rattus norvegicus	81.36	0.00e+00	2220.00
IUUC-Sha-107508	Sarcophilus harrisii	85.73	0.00e+00	2348.00
IUUC-Sar-113549	Sorex araneus	89.89	0.00e+00	1540.00
IUUC-Ssc-115753	Sus scrofa	84.68	0.00e+00	1813.00
IUUC-Tgu-117315	Taeniopygia guttata	88.88	0.00e+00	2381.00
IUUC-Tru-118153	Takifugu rubripes	77.59	0.00e+00	2061.00
IUUC-Tsy-119384	Tarsius syrichta	79.89	0.00e+00	2171.00
IUUC-Tni-120820	Tetraodon nigroviridis	84.26	2.00e-112	397.00
IUUC-Tbe-127579	Tupaia belangeri	72.86	0.00e+00	970.00
IUUC-Ttr-128488	Tursiops truncatus	79.02	0.00e+00	2123.00
IUUC-Vpa-130274	Vicugna pacos	81.98	0.00e+00	981.00
IUUC-Xtr-132199	Xenopus tropicalis	90.34	0.00e+00	2456.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence