iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021644

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02047362

Gene Name

Rab40b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000023994.1	ENSCPOT00000026884.1	ENSCPOP00000018289.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	5.40e-14	51.8	193	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw ++s++ SLq+LC++a+++c++ + +   dkLPLP +L+++L+++++
   Q: 193  LW-RPSKVLSLQDLCCRAVVSCTPVHLV---DKLPLPLALRSHLKSFSM 237
           67.99********************888...***************976 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

HGLVRLASTM SALGSPVRAY DFLLKFLLVG DSDVGKGEIL ASLQDGAAES PYGHPAGGID 60
HKTTTILLDG RRVKLQLWDT SGQGRFCTIF RSYSRGAQGV ILVYDIANRW SFDGINRWIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATGGGCTGG TGCGCCTGGC CAGCACGATG AGTGCCTTGG GCAGCCCCGT GCGAGCCTAT 60
GACTTTCTGC TCAAATTTCT GCTGGTGGGT GACAGCGACG TGGGCAAGGG TGAGATCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003206	Anas platyrhynchos	89.59	5.00e-120	423.00
IUUC-Aca-005004	Anolis carolinensis	85.13	5.00e-134	469.00
IUUC-Ame-011456	Astyanax mexicanus	83.90	1.00e-134	471.00
IUUC-Bta-012683	Bos taurus	89.55	2.00e-141	494.00
IUUC-Cja-018870	Callithrix jacchus	84.70	4.00e-131	460.00
IUUC-Cfa-020527	Canis familiaris	92.96	7.00e-110	390.00
IUUC-Csa-023150	Chlorocebus sabaeus	95.52	7.00e-152	529.00
IUUC-Cho-024716	Choloepus hoffmanni	88.89	3.00e-79	286.00
IUUC-Dre-028614	Danio rerio	82.84	1.00e-131	462.00
IUUC-Eca-033492	Equus caballus	91.89	5.00e-124	436.00
IUUC-Fca-035705	Felis catus	93.18	1.00e-122	431.00
IUUC-Gga-040925	Gallus gallus	88.43	4.00e-142	496.00
IUUC-Ggo-045012	Gorilla gorilla	85.45	2.00e-133	468.00
IUUC-Hsa-046747	Homo sapiens	95.15	6.00e-151	526.00
IUUC-Loc-052325	Lepisosteus oculatus	87.31	4.00e-140	490.00
IUUC-Laf-053340	Loxodonta africana	91.42	6.00e-145	506.00
IUUC-Mcc-054711	Macaca mulatta	93.33	4.00e-149	520.00
IUUC-Mga-059204	Meleagris gallopavo	88.81	4.00e-142	496.00
IUUC-Mmu-064144	Mus musculus	92.91	1.00e-148	518.00
IUUC-Mpu-066352	Mustela putorius furo	92.31	2.00e-122	431.00
IUUC-Nle-070096	Nomascus leucogenys	94.40	2.00e-149	520.00
IUUC-Opr-070662	Ochotona princeps	91.04	2.00e-142	498.00
IUUC-Ont-072397	Oreochromis niloticus	83.64	5.00e-134	469.00
IUUC-Ocu-074559	Oryctolagus cuniculus	92.91	3.00e-138	484.00
IUUC-Olo-080270	Oryza longistaminata	35.23	6.00e-12	65.10
IUUC-Oga-088133	Otolemur garnettii	93.31	7.00e-149	519.00
IUUC-Oar-089702	Ovis aries	89.50	7.00e-116	409.00
IUUC-Ptr-090544	Pan troglodytes	93.73	5.00e-149	520.00
IUUC-Pan-092812	Papio anubis	95.52	7.00e-152	529.00
IUUC-Psi-093120	Pelodiscus sinensis	88.81	5.00e-143	499.00
IUUC-Pma-094679	Petromyzon marinus	77.13	1.00e-103	368.00
IUUC-Pab-098735	Pongo abelii	95.52	7.00e-152	529.00
IUUC-Pva-102361	Pteropus vampyrus	90.84	1.00e-136	478.00
IUUC-Rno-105063	Rattus norvegicus	94.40	9.00e-151	525.00
IUUC-Sar-113518	Sorex araneus	85.99	2.00e-127	448.00
IUUC-Ssc-115719	Sus scrofa	87.73	4.00e-142	497.00
IUUC-Tsy-119011	Tarsius syrichta	93.85	1.00e-99	354.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence