iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135083

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM000786

Gene Name

ZEAMMB73_Zm00001d026627

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d026627	Zm00001d026627_T001	Zm00001d026627_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-29	102.0	465	500
UBD/Beta-Prp	1.20e-40	141.5	419	635

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           Htd vtc++f   +d++++sGs D ++++W++r+ +
   Q: 465  HTDYVTCIQFnpvDDNFFISGSLDEKVRIWSVRDRK 500
           ************766****************99865 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetl 133
           + sl gh a v ++++s+++ +l+++s D+t+k+wd+ t++c+ t++ h+d+v++++f+p ++++++sGs d+ +r+w ++ ++     +
   Q: 419  VCSLLGHAADVLDLSWSKSQ-YLISSSMDKTVKLWDITTSTCLKTFS-HTDYVTCIQFNPvDDNFFISGSLDEKVRIWSVRDRKIED-WN 505
           5689***************8.**************************.************888********************9998.76 PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl........tgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgec 214
           + h+ +v+ ++++pdg++ + Gs  +++ ++d + +kll++         ++  +++++  +f + +  e++  s d+++++++    e 
   Q: 506  DLHE-MVTAACYSPDGQVAMVGSHKGCCHIFDTSEKKLLYKSqidlrirkKKSGQKKITGFQFAPGSsSEVLITSADSRIRVVNG--DEF 592
           6665.9***************************9999999999999998855578999999999988799*************98..678 PP
   S: 215  vrtlnghtdnvksvrfs..pnderlvsgssDgsiriW...dlrsgdll 257
           v++++g +++ +++ +s  pn+++++++s+D  +++W   +       
   Q: 593  VHKFKGLRNTSSQISASvaPNGKYIICASEDSHVYVWrhdN-----SS 635
           **************99999******************6541.....33 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPEAARARGL REPAGEGEAE QEDEFYESLD RILSSSCSSA SASDDDADHR RRRSRRHHLL 60
HQHQHQHQPL SSAYDVWISE PTSVEERRRL LLQRLGLASD PPPRRSPSPP ASTPASPPAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCGCTCTG GTCTGCTCGC CGCCGACAGA CCACAGCCCC GGCCCGCGCG CGCCTTGGGT 60
GGGTGCCGGT GCCGGAGCGA CGGCAATGCC GGAGGCGGCG CGGGCGCGGG GCCTGCGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018681	Caenorhabditis elegans	38.14	3.00e-60	226.00
IUUC-Nfi-068449	Neosartorya fischeri	30.71	6.00e-40	159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence