iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006988

UUCD1 version

UUC-ArT-01309

Ensembl Protein ID

AT4G34380.1

UniProt Accession

Q9SZ03; Q9SZ03_ARATH

Genbank Protein ID

AAO64823.1; AEE86366.1; BAC42996.1; CAB36715.1; CAB80155.1

Protein Name

At4g34380; Putative uncharacterized protein AT4g34380; Putative uncharacterized protein At4g34380/F10M10_150; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

BT005888; CP002687; AK118385; AL035521; AL161585

Gene Name

At4g34380; At4g34380/F10M10_150; F10M10.150; F10M10_150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G34380	AT4G34380.1	AT4G34380.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-31	105.6	234	271
UBD/Beta-Prp	6.20e-53	180.8	233	462

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d v++l++  + +ll s+s+D tikvW++ + ++l 
   Q: 234  HNDAVSSLSLdVElGLLYSSSWDTTIKVWRIADSKCLE 271
           9*********877899**************99999985 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk....ghedsvls 99
           +h + ++++    +  ll ++s+d tikvw++ + k+l+s+  h++++++v    d+ +  tgs D+t+kvw  +l+   + htl     ++e+ v++
   Q: 233  KHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWkrELQGKGTKHTLAqvllKQENAVTA 329
           555555556665577788999999999999999999999999999999999888885.9999999999999977777555555554444488999999 PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtltgghtdsvyslsfdsng. 192
           l++  +++ +  Gs+d  ++ w+ ++++    +l+gh+++v c+ + +  nll sGs+D+ + +W+     k+ ++l  ltg h ++v++l++++++ 
   Q: 330  LAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAG--NLLLSGSADKNICVWRRdpsdKSHQCLSVLTG-HMGPVKCLAVEEERa 424
           999998888889999999999999988888889999999999999999..99999999999999999999999999999998.999999999888888 PP
   S: 193  ...............kelvsgsldgtvklwdlqtgecvrt 217
                            + sgsld++vk+w +++   + t
   Q: 425  chqgakasvaegdrkWIIYSGSLDKSVKVWRVSER--MAT 462
           88888999999998888899999999999999755..444 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MRNETGGTMV VDLQTDPYNN IHSRHNLSYD LSEGPKPRPK FGNISKTDHD EIFPPDDPII 60
INSNVTHQRF SSVSASTMSS GPASGEGSPC VMSPWARVSP PWGADFNEDN VLETNGLIGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTGGATA TTTCGTGTCT GTATATATAA GTTTGCATTT ATAAGATCAA TTCTCGCAAC 60
CCCATAAACA ATTCCTCAAG AGCCGTTGAC AAACCAAAAA ACTTGTTAAT TAAAAGTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ath:AT4G34380

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017232	Brassica rapa	80.97	0.00e+00	756.00
IUUC-Sar-113311	Sorex araneus	27.14	1.00e-12	68.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence