iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT	UniProt
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	6.70e-13	49.9	446	517

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 4    eqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsg 75
           ++ tlq+RlpdG r  r+F +s++l+++++f++  +v +  ++ Lv+p+Prr + + e +stl++ gL+++ 
   Q: 446  NAITLQVRLPDGTRHGRRFFKSDKLQSLFDFIDICRVVKPNTYRLVRPYPRRAFGDGECSSTLNDIGLTSKQ 517
           5679*****************************99*********************************9864 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MATPTQEAID TFMTITGSSN AVAVRKLEEY RGNLNRAVNA YFTHGDQNSY DAMDIDDGVT 60
PVLSEARTTD PFPLRDPNFG RSLFDNDPVM SRPPFVSHPR EAREIPIEVK DSNGPSGQSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAAAATATA CAAAAAGAAT AAAGAAAATA AAGTTTAAGA AAATCCACAC CAAATAAAAA 60
AGGAGAATTA AAAAAAATGG AAAAGAAGAA AGACCCTAAA AAAGGCTTTA AAAATCTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol

KEGG

ath:AT4G23040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005427	Arabidopsis lyrata	90.84	0.00e+00	850.00
IUUC-Cpo-022004	Cavia porcellus	36.59	4.00e-08	48.50
IUUC-Cho-024543	Choloepus hoffmanni	31.71	1.00e-06	45.80
IUUC-Dno-030016	Dasypus novemcinctus	34.94	1.00e-08	52.80
IUUC-Mmu-063233	Mus musculus	41.77	1.00e-09	56.60
IUUC-Olu-087658	Ostreococcus lucimarinus	33.65	1.00e-16	79.70
IUUC-Rno-105965	Rattus norvegicus	40.51	1.00e-07	49.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence