iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048116

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01021700

Gene Name

NUP43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000013449.2	ENSSTOT00000013455.2	ENSSTOP00000012057.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-17	63.5	261	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++++ ++f  s+ ++l ++s Dg++  WD +t+v++ks
   Q: 261  HEAEMWEVHFhpSNpDHLFTCSEDGSLWHWDASTDVPEKS 300
           99999******8778********************99986 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MEEIYAKFVS QKISKTRWRP VPPGSLQTAE TFATGSWDNE ENYVSLWSIG DFGNLDSDGG 60
FEGDHQLLCD IKHHGDVMDL QFFDQERIVA ASSTGCVTVF LHHPNNQTLS VNQQWTAAHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAGCATGG AGGAAATTTA TGCCAAGTTT GTGTCTCAGA AAATCAGCAA AACCCGCTGG 60
CGACCAGTGC CCCCGGGAAG CCTGCAGACC GCAGAGACCT TCGCTACCGG TTCTTGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	95.28	0.00e+00	721.00
IUUC-Atr-002526	Amborella trichopoda	27.61	2.00e-11	62.80
IUUC-Apl-003533	Anas platyrhynchos	74.70	8.00e-142	496.00
IUUC-Aca-004965	Anolis carolinensis	71.39	3.00e-162	564.00
IUUC-Aly-006431	Arabidopsis lyrata	29.59	9.00e-15	73.90
IUUC-Ath-007253	Arabidopsis thaliana	29.76	1.00e-14	73.90
IUUC-Ame-011694	Astyanax mexicanus	63.98	5.00e-122	430.00
IUUC-Bta-013161	Bos taurus	94.49	0.00e+00	750.00
IUUC-Bdi-014758	Brachypodium distachyon	26.94	3.00e-11	62.40
IUUC-Bol-016489	Brassica oleracea	26.57	9.00e-08	52.00
IUUC-Bra-017838	Brassica rapa	26.57	1.00e-08	53.90
IUUC-Cel-018567	Caenorhabditis elegans	29.05	4.00e-10	58.90
IUUC-Cja-020000	Callithrix jacchus	82.99	0.00e+00	644.00
IUUC-Cfa-021112	Canis familiaris	95.28	0.00e+00	755.00
IUUC-Cpo-022095	Cavia porcellus	90.81	0.00e+00	711.00
IUUC-Csa-023460	Chlorocebus sabaeus	95.80	0.00e+00	734.00
IUUC-Cho-024279	Choloepus hoffmanni	92.67	5.00e-178	616.00
IUUC-Cin-025360	Ciona intestinalis	34.78	2.00e-60	225.00
IUUC-Csv-026301	Ciona savignyi	36.48	4.00e-53	201.00
IUUC-Dre-028097	Danio rerio	62.27	9.00e-136	476.00
IUUC-Dno-029131	Dasypus novemcinctus	93.44	0.00e+00	735.00
IUUC-Dor-030496	Dipodomys ordii	84.03	0.00e+00	652.00
IUUC-Dme-031834	Drosophila melanogaster	27.61	3.00e-43	169.00
IUUC-Ete-032448	Echinops telfairi	91.48	7.00e-169	585.00
IUUC-Eca-034409	Equus caballus	94.23	0.00e+00	740.00
IUUC-Eeu-035343	Erinaceus europaeus	79.00	4.00e-160	557.00
IUUC-Fca-036177	Felis catus	96.33	0.00e+00	762.00
IUUC-Fal-037657	Ficedula albicollis	69.82	3.00e-155	540.00
IUUC-Gmo-038946	Gadus morhua	66.05	9.00e-143	499.00
IUUC-Gga-041070	Gallus gallus	73.23	7.00e-160	556.00
IUUC-Gac-042442	Gasterosteus aculeatus	66.93	2.00e-146	511.00
IUUC-Gma-043812	Glycine max	26.92	2.00e-12	66.20
IUUC-Ggo-045223	Gorilla gorilla	95.54	0.00e+00	761.00
IUUC-Hsa-045956	Homo sapiens	95.80	0.00e+00	763.00
IUUC-Lch-050035	Latimeria chalumnae	70.98	2.00e-160	558.00
IUUC-Laf-053404	Loxodonta africana	90.81	0.00e+00	712.00
IUUC-Mcc-055813	Macaca mulatta	95.80	0.00e+00	734.00
IUUC-Meu-056388	Macropus eugenii	77.09	3.00e-161	560.00
IUUC-Mga-060193	Meleagris gallopavo	71.92	3.00e-166	577.00
IUUC-Mmr-060818	Microcebus murinus	95.80	0.00e+00	754.00
IUUC-Mdo-062822	Monodelphis domestica	90.55	0.00e+00	710.00
IUUC-Mmu-064182	Mus musculus	95.28	0.00e+00	752.00
IUUC-Mac-065317	Musa acuminata	29.60	6.00e-09	54.70
IUUC-Mpu-066865	Mustela putorius furo	95.60	0.00e+00	672.00
IUUC-Mlu-067329	Myotis lucifugus	93.70	0.00e+00	700.00
IUUC-Nle-069093	Nomascus leucogenys	96.33	0.00e+00	764.00
IUUC-Opr-070481	Ochotona princeps	85.60	0.00e+00	672.00
IUUC-Ont-072445	Oreochromis niloticus	67.19	3.00e-148	517.00
IUUC-Oan-073029	Ornithorhynchus anatinus	77.17	2.00e-173	601.00
IUUC-Ocu-074275	Oryctolagus cuniculus	94.23	0.00e+00	748.00
IUUC-Ola-086862	Oryzias latipes	61.48	2.00e-132	464.00
IUUC-Oga-088952	Otolemur garnettii	96.32	0.00e+00	760.00
IUUC-Oar-089300	Ovis aries	95.28	0.00e+00	755.00
IUUC-Ptr-091389	Pan troglodytes	96.06	0.00e+00	765.00
IUUC-Pan-092174	Papio anubis	96.06	0.00e+00	736.00
IUUC-Psi-093326	Pelodiscus sinensis	77.19	6.00e-161	559.00
IUUC-Pfo-096331	Poecilia formosa	65.51	2.00e-144	504.00
IUUC-Pab-098306	Pongo abelii	96.33	0.00e+00	764.00
IUUC-Pop-099166	Populus trichocarpa	30.71	2.00e-11	63.50
IUUC-Pca-100455	Procavia capensis	90.67	1.00e-80	293.00
IUUC-Ppe-101380	Prunus persica	30.37	4.00e-13	68.60
IUUC-Pva-102578	Pteropus vampyrus	96.06	0.00e+00	723.00
IUUC-Rno-105146	Rattus norvegicus	93.96	0.00e+00	711.00
IUUC-Sha-107640	Sarcophilus harrisii	91.86	0.00e+00	731.00
IUUC-Sly-111767	Solanum lycopersicum	28.16	4.00e-10	58.90
IUUC-Stu-112515	Solanum tuberosum	28.16	4.00e-10	58.50
IUUC-Sar-113681	Sorex araneus	95.43	1.00e-109	389.00
IUUC-Sbi-113809	Sorghum bicolor	25.79	7.00e-06	44.30
IUUC-Ssc-116129	Sus scrofa	93.70	0.00e+00	719.00
IUUC-Tgu-117456	Taeniopygia guttata	68.54	7.00e-81	292.00
IUUC-Tru-117630	Takifugu rubripes	67.87	3.00e-99	353.00
IUUC-Tsy-119331	Tarsius syrichta	96.85	0.00e+00	765.00
IUUC-Tni-120077	Tetraodon nigroviridis	62.53	3.00e-135	474.00
IUUC-Tca-121814	Theobroma cacao	28.90	5.00e-11	62.00
IUUC-Tae-123605	Triticum aestivum	26.84	4.00e-11	62.00
IUUC-Tbe-127359	Tupaia belangeri	86.77	0.00e+00	660.00
IUUC-Ttr-128461	Tursiops truncatus	95.80	0.00e+00	729.00
IUUC-Vpa-130162	Vicugna pacos	96.33	0.00e+00	726.00
IUUC-Vvi-131114	Vitis vinifera	29.12	8.00e-12	64.30
IUUC-Xtr-132446	Xenopus tropicalis	69.21	4.00e-155	540.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence