iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115791

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU928493

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000014098.2	ENSSSCT00000015400.2	ENSSSCP00000014991.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-21	75.2	82	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f........sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt ++t++  f         + l++++s D+t+ vWD + g++++
   Q: 82   GHTQKITAITtFpsleaceeKNQLILTASADKTVIVWDCDIGRQVQ 127
           8*******9769999999874489**************98887766 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSS LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV QLDDYRFASA 60
GDDGIVVVWN AQTGEKLLEL NGHTQKITAI TTFPSLEACE EKNQLILTAS ADKTVIVWDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTACCCAAAC TCTTTGCGCA AATCTGTCGA CGCGACGCGC TTGCTCCCTT GGTGCTGTGC 60
GCGCCTCTGA ACCTCCGCTG ACGCTAAAGC TTTCGGCTGC TGTTCTCCCT TACCCAGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

KEGG

ssc:100520548

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	91.32	0.00e+00	869.00
IUUC-Apl-004087	Anas platyrhynchos	76.65	0.00e+00	647.00
IUUC-Aca-005359	Anolis carolinensis	71.71	0.00e+00	675.00
IUUC-Ame-010669	Astyanax mexicanus	42.08	4.00e-76	278.00
IUUC-Bta-013534	Bos taurus	90.85	0.00e+00	868.00
IUUC-Cja-019219	Callithrix jacchus	90.20	0.00e+00	836.00
IUUC-Cfa-020310	Canis familiaris	91.65	0.00e+00	844.00
IUUC-Cpo-021664	Cavia porcellus	87.34	0.00e+00	844.00
IUUC-Csa-024228	Chlorocebus sabaeus	91.29	0.00e+00	873.00
IUUC-Cho-024898	Choloepus hoffmanni	86.55	8.00e-114	403.00
IUUC-Dre-028538	Danio rerio	54.05	3.00e-128	451.00
IUUC-Dno-028861	Dasypus novemcinctus	88.07	0.00e+00	840.00
IUUC-Dor-030111	Dipodomys ordii	89.32	0.00e+00	854.00
IUUC-Ete-032444	Echinops telfairi	88.40	2.00e-159	555.00
IUUC-Eca-033676	Equus caballus	89.98	0.00e+00	855.00
IUUC-Eeu-034571	Erinaceus europaeus	80.83	0.00e+00	761.00
IUUC-Fca-035387	Felis catus	91.76	0.00e+00	868.00
IUUC-Fal-037310	Ficedula albicollis	75.11	0.00e+00	686.00
IUUC-Gmo-039224	Gadus morhua	53.46	3.00e-129	454.00
IUUC-Gga-040957	Gallus gallus	76.77	0.00e+00	701.00
IUUC-Gac-042385	Gasterosteus aculeatus	55.04	7.00e-140	489.00
IUUC-Ggo-044973	Gorilla gorilla	91.13	0.00e+00	868.00
IUUC-Hsa-046842	Homo sapiens	92.16	0.00e+00	875.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	90.06	3.00e-175	607.00
IUUC-Lch-049625	Latimeria chalumnae	63.96	2.00e-173	601.00
IUUC-Loc-052368	Lepisosteus oculatus	58.33	6.00e-153	533.00
IUUC-Laf-053678	Loxodonta africana	89.06	0.00e+00	840.00
IUUC-Mcc-055184	Macaca mulatta	90.79	0.00e+00	838.00
IUUC-Meu-056165	Macropus eugenii	77.17	0.00e+00	691.00
IUUC-Mga-060184	Meleagris gallopavo	75.32	5.00e-65	239.00
IUUC-Mmr-060965	Microcebus murinus	90.85	0.00e+00	860.00
IUUC-Mdo-062702	Monodelphis domestica	85.49	0.00e+00	816.00
IUUC-Mmu-063649	Mus musculus	78.33	2.00e-115	409.00
IUUC-Mpu-065747	Mustela putorius furo	90.79	0.00e+00	863.00
IUUC-Mlu-067873	Myotis lucifugus	91.74	0.00e+00	868.00
IUUC-Nle-069670	Nomascus leucogenys	92.16	0.00e+00	873.00
IUUC-Opr-070266	Ochotona princeps	78.87	0.00e+00	748.00
IUUC-Ont-071242	Oreochromis niloticus	54.39	8.00e-137	479.00
IUUC-Oan-072879	Ornithorhynchus anatinus	85.45	0.00e+00	783.00
IUUC-Ocu-074872	Oryctolagus cuniculus	66.00	3.00e-160	557.00
IUUC-Ola-087211	Oryzias latipes	49.02	2.00e-113	402.00
IUUC-Oga-088852	Otolemur garnettii	89.54	0.00e+00	851.00
IUUC-Oar-089812	Ovis aries	90.41	0.00e+00	861.00
IUUC-Ptr-091067	Pan troglodytes	91.94	0.00e+00	876.00
IUUC-Pan-091778	Papio anubis	91.09	0.00e+00	867.00
IUUC-Psi-093932	Pelodiscus sinensis	77.17	0.00e+00	711.00
IUUC-Pfo-096845	Poecilia formosa	54.35	3.00e-135	474.00
IUUC-Pab-097892	Pongo abelii	89.16	0.00e+00	761.00
IUUC-Pca-100567	Procavia capensis	66.88	9.00e-169	586.00
IUUC-Pva-102560	Pteropus vampyrus	88.45	0.00e+00	835.00
IUUC-Rno-105662	Rattus norvegicus	84.43	0.00e+00	811.00
IUUC-Sha-107058	Sarcophilus harrisii	82.93	0.00e+00	782.00
IUUC-Sar-113643	Sorex araneus	76.70	0.00e+00	680.00
IUUC-Tgu-117145	Taeniopygia guttata	76.04	0.00e+00	694.00
IUUC-Tru-117875	Takifugu rubripes	55.70	6.00e-142	496.00
IUUC-Tsy-119030	Tarsius syrichta	89.56	0.00e+00	679.00
IUUC-Tni-119761	Tetraodon nigroviridis	53.51	6.00e-136	476.00
IUUC-Tbe-127757	Tupaia belangeri	88.25	0.00e+00	729.00
IUUC-Ttr-128762	Tursiops truncatus	95.42	0.00e+00	904.00
IUUC-Vpa-130360	Vicugna pacos	95.21	0.00e+00	900.00
IUUC-Xtr-131954	Xenopus tropicalis	65.13	4.00e-171	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence