iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006406

Ensembl Protein ID

fgenesh2_kg.8__815__AT5G49430.1

UniProt Accession

D7MNS0; D7MNS0_ARALL

Genbank Protein ID

EFH41992.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_494999

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__815__AT5G49430.1	fgenesh2_kg.8__815__AT5G49430.1	fgenesh2_kg.8__815__AT5G49430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-25	86.4	311	344
UBD/Beta-Prp	4.00e-43	148.4	222	484

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWD 29
           gHt+ vt++af   ++    l+s+sdDgt+++WD
   Q: 311  GHTGAVTAIAFsprPGspYQLLSSSDDGTCRIWD 344
           8************9555356************** PP

UBD/Beta-Prp

   S: 2    iktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw 79
           ik l+gh+ +v +++   +++++++tgs+d+ +kvw+++t  +l+s  ghe+ +t++  s++  +++++s+D +i+vw
   Q: 222  IKRLRGHRNAVYCAIL-DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVW 298
           5678889998888655.59*******************************************99************** PP
   S: 80   dlstgkcvhtlkghedsvlslsfsp...sgdklvsGshdrtirvwdletgqclee..................tlsgh 136
            l +g +v++l+gh+  v++++fsp   s + l+s s+d t r+wd +  q                       ++++
   Q: 299  RLPDGLPVSVLRGHTGAVTAIAFSPrpgSPYQLLSSSDDGTCRIWDARGAQFAPRiyvprppspdgknsgpssSNAQQ 376
           *************************98777**********************999******************99999 PP
   S: 137  dgvvncvvvhpdgnllvsGslDrtvrlWdl............ktgkllrtltgghtdsvyslsfdsng.......... 192
           ++ + c +++ +g+++v+Gs D+  r++++            + +  ++ l g h+++v+ ++f+             
   Q: 377  SHQIFCCAFNANGSVFVTGSSDTLARVYSVwsanktntddpeQPNHEMDVLAG-HENDVNYVQFSGCAagskfsvtdy 453
           99*****************************9999999988544555555566.*********665555566666666 PP
   S: 193  ................kelvsgsldgtvklw 207
                             +v++s+dg+ ++w
   Q: 454  skdenvpkfknswfchDNIVTCSRDGSAIIW 484
           677799999999***99************** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKPLNFSRKL PGNVQIPDPD IAQVVAPNID LDLREVYFLI LHLLSSGPCQ KTYALLRHEL 60
LEHELLPRRY HAWYSRSGLS SGDENDDGNS FPLNYTELAK RYSHVKKDHL VELLKQLVFV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCTTA GGAAAAATAC TCCAAAAGGC GATTCAGTTT CACTCCCTAT GAAGCCGTTG 60
AATTTCTCCA GAAAATTGCC AGGGAATGTG CAGATTCCAG ACCCTGATAT TGCTCAAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

KEGG

aly:ARALYDRAFT_494999

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	56.23	0.00e+00	860.00
IUUC-Aml-002299	Ailuropoda melanoleuca	32.40	7.00e-72	265.00
IUUC-Atr-002600	Amborella trichopoda	71.50	0.00e+00	1097.00
IUUC-Aca-004474	Anolis carolinensis	33.23	2.00e-80	294.00
IUUC-Ath-006801	Arabidopsis thaliana	97.29	0.00e+00	2914.00
IUUC-Ame-010718	Astyanax mexicanus	30.94	1.00e-80	295.00
IUUC-Bdi-014797	Brachypodium distachyon	53.86	0.00e+00	771.00
IUUC-Bol-015737	Brassica oleracea	87.01	0.00e+00	2580.00
IUUC-Bra-017961	Brassica rapa	86.65	0.00e+00	2563.00
IUUC-Cja-018868	Callithrix jacchus	33.13	3.00e-80	293.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	33.23	4.00e-33	136.00
IUUC-Csa-023618	Chlorocebus sabaeus	32.99	4.00e-80	293.00
IUUC-Cho-024690	Choloepus hoffmanni	27.76	8.00e-35	143.00
IUUC-Csv-025813	Ciona savignyi	27.25	1.00e-57	217.00
IUUC-Dre-028029	Danio rerio	31.85	3.00e-79	290.00
IUUC-Dno-030048	Dasypus novemcinctus	32.64	3.00e-72	267.00
IUUC-Eeu-034688	Erinaceus europaeus	33.33	3.00e-38	154.00
IUUC-Gmo-039116	Gadus morhua	27.78	2.00e-22	101.00
IUUC-Gac-042435	Gasterosteus aculeatus	30.69	3.00e-62	234.00
IUUC-Gma-043340	Glycine max	56.84	0.00e+00	1658.00
IUUC-Itr-047962	Ictidomys tridecemlineatus	27.06	5.00e-23	102.00
IUUC-Lch-050646	Latimeria chalumnae	32.49	1.00e-77	285.00
IUUC-Lpe-051619	Leersia perrieri	59.13	0.00e+00	1025.00
IUUC-Loc-052672	Lepisosteus oculatus	32.69	4.00e-79	290.00
IUUC-Meu-056321	Macropus eugenii	29.47	1.00e-54	208.00
IUUC-Mtr-058094	Medicago truncatula	56.90	0.00e+00	1605.00
IUUC-Mac-065343	Musa acuminata	50.64	0.00e+00	1464.00
IUUC-Mlu-067928	Myotis lucifugus	32.35	8.00e-72	265.00
IUUC-Oba-075709	Oryza barthii	50.61	0.00e+00	1362.00
IUUC-Obr-076619	Oryza brachyantha	60.15	0.00e+00	1035.00
IUUC-Ogl-077493	Oryza glaberrima	48.42	0.00e+00	1130.00
IUUC-Ogu-078641	Oryza glumaepatula	47.15	0.00e+00	977.00
IUUC-Oin-079669	Oryza indica	69.63	0.00e+00	703.00
IUUC-Olo-080755	Oryza longistaminata	48.25	0.00e+00	1088.00
IUUC-Oni-082991	Oryza nivara	47.23	0.00e+00	1067.00
IUUC-Opu-083233	Oryza punctata	50.58	0.00e+00	1387.00
IUUC-Oru-085195	Oryza rufipogon	50.55	0.00e+00	1362.00
IUUC-Ola-086648	Oryzias latipes	33.43	9.00e-81	295.00
IUUC-Oga-088578	Otolemur garnettii	33.00	2.00e-69	257.00
IUUC-Pma-094427	Petromyzon marinus	32.25	7.00e-38	150.00
IUUC-Pfo-096191	Poecilia formosa	33.48	4.00e-81	296.00
IUUC-Pab-098402	Pongo abelii	32.99	6.00e-80	292.00
IUUC-Pop-099185	Populus trichocarpa	58.19	0.00e+00	1728.00
IUUC-Pca-101128	Procavia capensis	32.07	6.00e-66	246.00
IUUC-Ppe-101849	Prunus persica	55.75	0.00e+00	1664.00
IUUC-Sar-113004	Sorex araneus	30.95	6.00e-66	246.00
IUUC-Ssc-115461	Sus scrofa	31.83	7.00e-71	262.00
IUUC-Tru-117625	Takifugu rubripes	34.14	6.00e-81	296.00
IUUC-Tni-120716	Tetraodon nigroviridis	34.29	2.00e-81	297.00
IUUC-Tca-121098	Theobroma cacao	57.50	0.00e+00	1730.00
IUUC-Tae-125478	Triticum aestivum	64.69	0.00e+00	1024.00
IUUC-Tur-126809	Triticum urartu	62.47	0.00e+00	1010.00
IUUC-Tbe-127479	Tupaia belangeri	44.14	3.00e-30	127.00
IUUC-Ttr-128427	Tursiops truncatus	32.58	1.00e-71	265.00
IUUC-Vpa-130160	Vicugna pacos	32.46	1.00e-70	261.00
IUUC-Vvi-131362	Vitis vinifera	58.83	0.00e+00	1741.00
IUUC-Xtr-132717	Xenopus tropicalis	32.74	2.00e-81	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence