iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-061964

Ensembl Protein ID

ENSMODP00000004805.3

UniProt Accession

F6YTS0; F6YTS0_MONDO

Protein Name

Uncharacterized protein

Gene Name

RYBP

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000003921.3	ENSMODT00000004908.3	ENSMODP00000004805.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	4.10e-14	51.9	41	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 1    aeaqWaCsaCTflNePeavkCemCsrpRgc 30
           +e++W+Cs+CTf+N++ea+kC++C+ ++g+
   Q: 41   DEGFWDCSVCTFRNSAEAFKCSICDVRKGT 70
           589*************************95 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

RVRAPPPPPP RPQPWRLLSP TLPDKGNGFT RPKRQAKPAA DEGFWDCSVC TFRNSAEAFK 60
CSICDVRKGT STRKPRINSQ LVAQQVAQQY ATPPPPKKEK KEKVEKQEKE KPDKEKEISP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAGGCGCC GCTAAGATGG ACGTCGGCCC GGGCGGGCGG CGGGGAGGCG GTGACTGCCG 60
GCCTGCCTGC CGGCGGGGCC GAACGCCGCG CGAGCGAGCT AGCGAGTGAG AGCGCCACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR033774--YAF2_RYBP
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF17219--YAF2_RYBP
PF00641--zf-RanBP

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0031519--C:PcG protein complex
GO:0003677--F:DNA binding
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0035518--P:histone H2A monoubiquitination
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002182	Ailuropoda melanoleuca	97.25	4.00e-62	231.00
IUUC-Apl-003475	Anas platyrhynchos	98.17	8.00e-63	233.00
IUUC-Aca-004725	Anolis carolinensis	96.80	5.00e-62	230.00
IUUC-Bta-012724	Bos taurus	96.95	5.00e-35	140.00
IUUC-Cja-019921	Callithrix jacchus	97.25	1.00e-62	232.00
IUUC-Cfa-020363	Canis familiaris	97.22	5.00e-61	227.00
IUUC-Cpo-022408	Cavia porcellus	97.71	1.00e-35	142.00
IUUC-Csa-023628	Chlorocebus sabaeus	97.26	4.00e-63	234.00
IUUC-Cho-024871	Choloepus hoffmanni	95.52	1.00e-38	151.00
IUUC-Dno-029292	Dasypus novemcinctus	97.71	2.00e-35	141.00
IUUC-Dor-030691	Dipodomys ordii	97.71	1.00e-35	141.00
IUUC-Ete-032320	Echinops telfairi	96.33	3.00e-61	227.00
IUUC-Eca-034330	Equus caballus	97.25	1.00e-62	232.00
IUUC-Eeu-035193	Erinaceus europaeus	82.11	5.00e-43	167.00
IUUC-Fca-035645	Felis catus	97.71	2.00e-35	141.00
IUUC-Fal-036647	Ficedula albicollis	98.60	2.00e-60	225.00
IUUC-Gga-040262	Gallus gallus	98.63	2.00e-63	235.00
IUUC-Ggo-045026	Gorilla gorilla	97.71	1.00e-35	142.00
IUUC-Hsa-046566	Homo sapiens	97.26	4.00e-63	234.00
IUUC-Itr-048728	Ictidomys tridecemlineatus	96.18	2.00e-34	138.00
IUUC-Loc-051746	Lepisosteus oculatus	84.73	8.00e-40	157.00
IUUC-Laf-054352	Loxodonta africana	96.79	4.00e-61	227.00
IUUC-Mcc-055623	Macaca mulatta	97.25	9.00e-62	230.00
IUUC-Mga-059812	Meleagris gallopavo	98.47	7.00e-36	142.00
IUUC-Mmr-061669	Microcebus murinus	95.42	3.00e-40	157.00
IUUC-Mmu-063177	Mus musculus	96.35	4.00e-63	234.00
IUUC-Mac-065491	Musa acuminata	42.86	1.00e-03	36.20
IUUC-Mpu-065711	Mustela putorius furo	97.25	9.00e-63	232.00
IUUC-Mlu-067973	Myotis lucifugus	97.59	3.00e-17	80.50
IUUC-Nle-069817	Nomascus leucogenys	97.25	2.00e-62	231.00
IUUC-Opr-070623	Ochotona princeps	97.71	1.00e-35	142.00
IUUC-Oan-072949	Ornithorhynchus anatinus	98.17	2.00e-63	235.00
IUUC-Ocu-074013	Oryctolagus cuniculus	96.73	1.00e-59	222.00
IUUC-Oar-090312	Ovis aries	96.95	5.00e-35	140.00
IUUC-Ptr-091316	Pan troglodytes	97.22	2.00e-60	226.00
IUUC-Pan-091877	Papio anubis	97.26	4.00e-63	234.00
IUUC-Psi-093195	Pelodiscus sinensis	94.71	1.00e-61	229.00
IUUC-Pab-098578	Pongo abelii	97.22	1.00e-60	226.00
IUUC-Pca-100706	Procavia capensis	93.30	5.00e-41	160.00
IUUC-Pva-102682	Pteropus vampyrus	96.33	8.00e-60	223.00
IUUC-Rno-105156	Rattus norvegicus	96.33	2.00e-62	231.00
IUUC-Sha-107156	Sarcophilus harrisii	100.00	2.00e-36	144.00
IUUC-Sar-113234	Sorex araneus	92.09	7.00e-56	209.00
IUUC-Ssc-116262	Sus scrofa	97.71	1.00e-35	142.00
IUUC-Tgu-116730	Taeniopygia guttata	98.17	6.00e-63	233.00
IUUC-Tsy-119328	Tarsius syrichta	97.71	2.00e-35	141.00
IUUC-Tre-121881	Trichoderma reesei	38.71	2.20e-02	33.50
IUUC-Tvi-122470	Trichoderma virens	44.83	4.00e-03	36.20
IUUC-Tbe-127332	Tupaia belangeri	97.71	5.00e-63	233.00
IUUC-Ttr-128963	Tursiops truncatus	97.25	1.00e-62	232.00
IUUC-Vpa-130270	Vicugna pacos	94.57	2.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence