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Tag Content
iUUCD ID IUUC-Ocu-074527
Ensembl Protein ID ENSOCUP00000012504.3
UniProt Accession G1T7M0; G1T7M0_RABIT
Genbank Protein ID ENSOCUP00000012504
Protein Name Presenilin
Genbank Nucleotide ID AAGW02049274
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000014545.3 ENSOCUT00000014544.3 ENSOCUP00000012504.3
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 1.70e-08 34.4 357 396
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnnLLe 41
    +eta+e+++++FP+l+ys+++v+L++++ +++a+ + +
   Q: 357 VETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSK 396
    89***************************99999987765 PP
   

Organism Oryctolagus cuniculus
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
MLAPPLRLGP PGWPSANDAR AGNDDTGEPS EAGPGPGCTG GRGSTAETKQ RLLRQEPRLR 60
ADGGGGGGKS VAPPEALFSV KKHFCTVAPM TELPAPVSYF QNAQMSEDNH LSNTNENRER 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ocu-074527|UBD,CUE|Oryctolagus cuniculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTGGATTTA ACAAGGGGGC CAAGAAAAAG CCTACGCCGG CCCAAGCTCT GCAGAAACTC 60
CGTCTCAGCG CTAGAGCAGT CCCGGAGCCC TAGGCCAGCC CTCCTGGCAG GTAGCTCCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ocu-074527|UBD,CUE|Oryctolagus cuniculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN
PR01073--PRESENILIN1

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 35.74 5.00e-26 113.00
IUUC-Aml-001648 Ailuropoda melanoleuca 90.96 2.00e-161 561.00
IUUC-Atr-003039 Amborella trichopoda 33.33 4.00e-39 155.00
IUUC-Apl-003727 Anas platyrhynchos 82.34 4.00e-178 617.00
IUUC-Aca-004582 Anolis carolinensis 81.66 0.00e+00 639.00
IUUC-Aly-005455 Arabidopsis lyrata 32.56 7.00e-18 85.10
IUUC-Ath-006730 Arabidopsis thaliana 33.95 1.00e-18 87.40
IUUC-Ame-011500 Astyanax mexicanus 73.42 7.00e-151 526.00
IUUC-Bta-013026 Bos taurus 86.22 0.00e+00 689.00
IUUC-Bdi-014196 Brachypodium distachyon 33.52 1.00e-29 124.00
IUUC-Bol-015841 Brassica oleracea 35.24 1.00e-31 130.00
IUUC-Bra-017580 Brassica rapa 60.00 1.00e-17 84.00
IUUC-Cel-018553 Caenorhabditis elegans 52.62 3.00e-96 345.00
IUUC-Cja-019994 Callithrix jacchus 96.24 0.00e+00 689.00
IUUC-Cfa-020074 Canis familiaris 91.65 0.00e+00 719.00
IUUC-Cpo-022237 Cavia porcellus 94.31 0.00e+00 708.00
IUUC-Csa-023537 Chlorocebus sabaeus 95.09 0.00e+00 769.00
IUUC-Cho-024735 Choloepus hoffmanni 80.64 0.00e+00 646.00
IUUC-Cin-025780 Ciona intestinalis 62.91 3.00e-124 437.00
IUUC-Csv-025967 Ciona savignyi 62.56 7.00e-119 420.00
IUUC-Dre-028689 Danio rerio 78.70 2.00e-145 509.00
IUUC-Dno-029758 Dasypus novemcinctus 89.15 0.00e+00 705.00
IUUC-Dor-030609 Dipodomys ordii 72.22 1.00e-171 596.00
IUUC-Dme-031929 Drosophila melanogaster 55.64 2.00e-110 392.00
IUUC-Ete-032487 Echinops telfairi 81.52 2.00e-80 293.00
IUUC-Eeu-035134 Erinaceus europaeus 91.23 2.00e-143 501.00
IUUC-Fca-036243 Felis catus 91.68 0.00e+00 712.00
IUUC-Fal-036600 Ficedula albicollis 82.94 2.00e-178 618.00
IUUC-Gmo-038550 Gadus morhua 65.24 8.00e-115 406.00
IUUC-Gga-040993 Gallus gallus 83.37 0.00e+00 630.00
IUUC-Gac-042342 Gasterosteus aculeatus 69.21 9.00e-131 459.00
IUUC-Gma-043822 Glycine max 38.69 8.00e-24 104.00
IUUC-Ggo-044859 Gorilla gorilla 94.54 3.00e-169 587.00
IUUC-Hsa-046822 Homo sapiens 94.87 0.00e+00 768.00
IUUC-Hvu-047141 Hordeum vulgare 36.93 1.00e-25 110.00
IUUC-Itr-048420 Ictidomys tridecemlineatus 94.74 3.00e-157 547.00
IUUC-Lch-049946 Latimeria chalumnae 68.09 7.00e-141 493.00
IUUC-Lpe-051132 Leersia perrieri 33.24 1.00e-29 124.00
IUUC-Loc-052469 Lepisosteus oculatus 62.85 3.00e-136 478.00
IUUC-Laf-053979 Loxodonta africana 89.88 2.00e-178 618.00
IUUC-Mcc-055682 Macaca mulatta 94.87 0.00e+00 768.00
IUUC-Meu-056004 Macropus eugenii 75.71 1.00e-152 532.00
IUUC-Mtr-058392 Medicago truncatula 34.79 5.00e-30 125.00
IUUC-Mga-059466 Meleagris gallopavo 82.94 0.00e+00 627.00
IUUC-Mmr-061538 Microcebus murinus 76.50 8.00e-163 566.00
IUUC-Mdo-062122 Monodelphis domestica 84.75 0.00e+00 669.00
IUUC-Mmu-063176 Mus musculus 91.03 0.00e+00 711.00
IUUC-Mpu-065927 Mustela putorius furo 92.69 0.00e+00 719.00
IUUC-Mlu-067079 Myotis lucifugus 89.98 0.00e+00 736.00
IUUC-Nle-070180 Nomascus leucogenys 94.87 0.00e+00 768.00
IUUC-Opr-070847 Ochotona princeps 88.94 0.00e+00 687.00
IUUC-Ont-071846 Oreochromis niloticus 76.10 8.00e-146 510.00
IUUC-Oan-072783 Ornithorhynchus anatinus 83.49 6.00e-134 469.00
IUUC-Oba-075256 Oryza barthii 33.23 3.00e-28 119.00
IUUC-Obr-076302 Oryza brachyantha 33.33 5.00e-30 125.00
IUUC-Ogl-077097 Oryza glaberrima 32.32 6.00e-29 122.00
IUUC-Ogu-078570 Oryza glumaepatula 32.32 4.00e-29 122.00
IUUC-Oin-079244 Oryza indica 32.32 6.00e-29 121.00
IUUC-Olo-080484 Oryza longistaminata 34.86 7.00e-24 103.00
IUUC-Ome-081814 Oryza meridionalis 32.68 1.00e-28 120.00
IUUC-Oni-082057 Oryza nivara 32.32 5.00e-29 121.00
IUUC-Opu-084176 Oryza punctata 34.17 2.00e-29 123.00
IUUC-Oru-084618 Oryza rufipogon 32.32 7.00e-29 121.00
IUUC-Osa-085602 Oryza sativa 33.24 1.00e-28 120.00
IUUC-Olu-087811 Ostreococcus lucimarinus 37.88 2.00e-47 182.00
IUUC-Oar-090348 Ovis aries 89.77 0.00e+00 725.00
IUUC-Ptr-091060 Pan troglodytes 94.87 0.00e+00 768.00
IUUC-Pan-091855 Papio anubis 86.32 0.00e+00 666.00
IUUC-Psi-093505 Pelodiscus sinensis 82.09 0.00e+00 628.00
IUUC-Pfo-097396 Poecilia formosa 76.19 4.00e-150 524.00
IUUC-Pab-098591 Pongo abelii 95.47 0.00e+00 771.00
IUUC-Pop-099661 Populus trichocarpa 31.33 1.00e-31 130.00
IUUC-Pca-101029 Procavia capensis 84.04 0.00e+00 647.00
IUUC-Ppe-101495 Prunus persica 33.55 2.00e-37 149.00
IUUC-Pva-102244 Pteropus vampyrus 84.22 0.00e+00 661.00
IUUC-Rno-105861 Rattus norvegicus 91.24 0.00e+00 711.00
IUUC-Sha-107045 Sarcophilus harrisii 86.20 0.00e+00 668.00
IUUC-Smo-109325 Selaginella moellendorffii 37.94 1.00e-37 150.00
IUUC-Sit-110624 Setaria italica 35.83 3.00e-28 119.00
IUUC-Stu-112433 Solanum tuberosum 35.19 2.00e-34 139.00
IUUC-Sar-113169 Sorex araneus 86.76 6.00e-142 497.00
IUUC-Sbi-114305 Sorghum bicolor 34.81 1.00e-27 117.00
IUUC-Ssc-115766 Sus scrofa 88.91 0.00e+00 699.00
IUUC-Tgu-116469 Taeniopygia guttata 86.76 8.00e-138 483.00
IUUC-Tru-117732 Takifugu rubripes 77.33 2.00e-144 504.00
IUUC-Tsy-119624 Tarsius syrichta 83.83 0.00e+00 657.00
IUUC-Tni-119852 Tetraodon nigroviridis 71.65 1.00e-134 473.00
IUUC-Tca-121865 Theobroma cacao 33.17 9.00e-37 147.00
IUUC-Tae-125925 Triticum aestivum 36.45 9.00e-28 117.00
IUUC-Tur-126237 Triticum urartu 36.07 3.00e-26 112.00
IUUC-Tbe-128148 Tupaia belangeri 85.94 2.00e-171 594.00
IUUC-Ttr-128793 Tursiops truncatus 89.34 0.00e+00 684.00
IUUC-Vpa-130625 Vicugna pacos 75.00 6.00e-155 540.00
IUUC-Vvi-131312 Vitis vinifera 38.33 2.00e-19 90.10
IUUC-Xtr-131790 Xenopus tropicalis 77.02 1.00e-157 549.00
IUUC-Xma-133377 Xiphophorus maculatus 76.25 1.00e-148 519.00
Created Date 25-Jun-2017

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