iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115867

Ensembl Protein ID

ENSSSCP00000008146.2

UniProt Accession

F1RNS7; F1RNS7_PIG

Genbank Protein ID

ENSSSCP00000008146

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP102617

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000007625.2	ENSSSCT00000008365.2	ENSSSCP00000008146.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-12	45.7	45	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 45   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 74
           9**********888***************6 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MHASSHSLHP PVSPAEIAIC PNNHEVHIYE KSGNKWVQVH ELKEHNGQVT GIDWAPESNR 60
IVTCGTDRNA YVWTLKGRTW KPTLVILRIN RAARCVRWAP QENKFAVGSG SRVISICYFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGACCTGA GGGGCTTCAG GGGGCTCCTC CCAGGCAGAG AGTTGCAAAG GACAAGGTAA 60
CTGATCTGGT GGCCTGTCCA GGGTGTTCCT CATGGGGGGT GAGAGCCAGG CATGCACGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0051015--F:actin filament binding
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Opr-070519	Ochotona princeps	97.80	2.00e-132	464.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence