iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID	iRefIndex
Post-translational Modifications (PTMs)
CPLM	dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-07	30.4	112	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWDlrtgvl 35
           H ++vt++  +d  ++l + + D+ + vW+l++ ++
   Q: 112  HDGPVTSI-TNDnaGHLYTVGADCRVVVWSLTDERS 146
           89999998.54559*****************99876 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSLGKKHVLG FSPNGGQLFA SVDESGVLRI WNTETNTLYQ EFTPNLQLSG SCTALTWVLV 60
AGSRPKKSRK SLQAQDAAGD QLHIALGTYK GSVVIYSLAE GKISRTLSGD SHDGPVTSIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAAGTGCGA CGAGTGTGAG CCGATGTAAA CACTAGCCTT AGCGCCCATC TCTAATTCAA 60
AACATAAAAA ACGATGTCGC TGGGCAAGAA GCACGTGTTG GGATTTTCGC CCAATGGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF04003--Utp12

SMART

SM00320--WD40

Gene Ontology

GO:0009267--P:cellular response to starvation

KEGG

dme:Dmel_CG30349

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	26.31	6.00e-41	161.00
IUUC-Atr-002533	Amborella trichopoda	23.16	2.00e-16	80.10
IUUC-Apl-003242	Anas platyrhynchos	27.75	5.00e-34	138.00
IUUC-Aca-004607	Anolis carolinensis	26.80	3.00e-45	175.00
IUUC-Ame-011014	Astyanax mexicanus	26.32	4.00e-31	129.00
IUUC-Bta-012605	Bos taurus	25.96	5.00e-41	161.00
IUUC-Bdi-014072	Brachypodium distachyon	21.19	4.00e-19	89.00
IUUC-Bol-016255	Brassica oleracea	25.85	1.00e-12	67.80
IUUC-Bra-016850	Brassica rapa	22.32	4.00e-14	72.40
IUUC-Cja-019620	Callithrix jacchus	25.78	7.00e-44	171.00
IUUC-Cfa-020520	Canis familiaris	25.78	4.00e-40	159.00
IUUC-Cpo-022456	Cavia porcellus	25.95	1.00e-37	150.00
IUUC-Cho-024726	Choloepus hoffmanni	27.58	6.00e-41	161.00
IUUC-Cin-025761	Ciona intestinalis	20.88	2.00e-20	92.80
IUUC-Dre-028051	Danio rerio	27.21	5.00e-38	151.00
IUUC-Dno-030031	Dasypus novemcinctus	27.12	7.00e-43	167.00
IUUC-Ete-032863	Echinops telfairi	27.62	9.00e-09	54.70
IUUC-Eca-033243	Equus caballus	25.36	2.00e-28	119.00
IUUC-Eeu-034970	Erinaceus europaeus	24.08	4.00e-19	89.40
IUUC-Fca-036009	Felis catus	26.31	2.00e-41	163.00
IUUC-Fal-037264	Ficedula albicollis	26.25	2.00e-32	133.00
IUUC-Gmo-039124	Gadus morhua	28.36	2.00e-41	163.00
IUUC-Gga-040862	Gallus gallus	27.46	2.00e-44	172.00
IUUC-Gac-041468	Gasterosteus aculeatus	25.13	3.00e-43	169.00
IUUC-Gma-042795	Glycine max	27.59	4.00e-15	75.50
IUUC-Ggo-044432	Gorilla gorilla	25.61	2.00e-43	169.00
IUUC-Hsa-047036	Homo sapiens	25.61	3.00e-43	169.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	26.34	2.00e-40	159.00
IUUC-Lch-049553	Latimeria chalumnae	25.71	1.00e-40	160.00
IUUC-Laf-053462	Loxodonta africana	26.48	1.00e-43	170.00
IUUC-Mcc-055239	Macaca mulatta	25.78	1.00e-43	170.00
IUUC-Mtr-057977	Medicago truncatula	23.01	4.00e-13	68.90
IUUC-Mga-060079	Meleagris gallopavo	26.73	6.00e-33	134.00
IUUC-Mmr-061472	Microcebus murinus	26.61	8.00e-44	171.00
IUUC-Mdo-061972	Monodelphis domestica	26.09	2.00e-43	169.00
IUUC-Mmu-063354	Mus musculus	26.09	6.00e-37	148.00
IUUC-Mac-065064	Musa acuminata	23.06	1.00e-13	70.10
IUUC-Mpu-066877	Mustela putorius furo	26.48	1.00e-42	167.00
IUUC-Mlu-067476	Myotis lucifugus	25.61	5.00e-38	151.00
IUUC-Nle-069119	Nomascus leucogenys	25.78	2.00e-43	169.00
IUUC-Ont-072093	Oreochromis niloticus	27.77	1.00e-50	194.00
IUUC-Oan-072944	Ornithorhynchus anatinus	24.81	1.00e-29	123.00
IUUC-Ocu-074472	Oryctolagus cuniculus	26.94	5.00e-43	168.00
IUUC-Oba-075009	Oryza barthii	23.13	2.00e-16	80.10
IUUC-Ogl-077189	Oryza glaberrima	22.67	1.00e-15	77.80
IUUC-Oin-079064	Oryza indica	22.89	8.00e-16	77.80
IUUC-Opu-083604	Oryza punctata	22.60	4.00e-15	75.90
IUUC-Oru-084620	Oryza rufipogon	22.89	9.00e-16	77.80
IUUC-Osa-085345	Oryza sativa	22.89	5.00e-16	79.00
IUUC-Ola-086626	Oryzias latipes	27.62	5.00e-46	178.00
IUUC-Oga-087911	Otolemur garnettii	25.78	3.00e-43	169.00
IUUC-Ptr-091603	Pan troglodytes	25.61	8.00e-43	167.00
IUUC-Pan-092569	Papio anubis	25.78	1.00e-43	170.00
IUUC-Pma-094287	Petromyzon marinus	24.51	8.00e-41	160.00
IUUC-Ppa-095327	Physcomitrella patens	23.38	2.00e-14	73.60
IUUC-Pfo-097292	Poecilia formosa	27.95	1.00e-47	184.00
IUUC-Pab-097878	Pongo abelii	25.78	2.00e-43	169.00
IUUC-Pop-099418	Populus trichocarpa	21.79	4.00e-17	82.40
IUUC-Pca-100941	Procavia capensis	25.48	7.00e-41	161.00
IUUC-Ppe-101779	Prunus persica	21.04	1.00e-14	74.30
IUUC-Pva-102493	Pteropus vampyrus	25.13	3.00e-36	145.00
IUUC-Rno-105084	Rattus norvegicus	26.17	3.00e-37	149.00
IUUC-Sha-107486	Sarcophilus harrisii	26.04	8.00e-43	167.00
IUUC-Sit-110825	Setaria italica	23.82	3.00e-17	82.80
IUUC-Sly-111365	Solanum lycopersicum	22.20	5.00e-12	65.50
IUUC-Stu-112812	Solanum tuberosum	22.62	3.00e-12	66.20
IUUC-Sar-113326	Sorex araneus	28.14	5.00e-23	101.00
IUUC-Sbi-114426	Sorghum bicolor	24.51	4.00e-21	95.50
IUUC-Tgu-116726	Taeniopygia guttata	27.88	6.00e-46	177.00
IUUC-Tru-117848	Takifugu rubripes	25.99	3.00e-39	155.00
IUUC-Tni-120591	Tetraodon nigroviridis	26.51	1.00e-39	157.00
IUUC-Tca-121576	Theobroma cacao	26.67	5.00e-14	72.00
IUUC-Tae-125648	Triticum aestivum	23.09	1.00e-20	94.40
IUUC-Tbe-127832	Tupaia belangeri	25.63	1.00e-30	126.00
IUUC-Ttr-128812	Tursiops truncatus	24.61	5.00e-28	118.00
IUUC-Xma-133557	Xiphophorus maculatus	29.05	8.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence