iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mlu-067476

Ensembl Protein ID

ENSMLUP00000009734.2

UniProt Accession

G1PGH0; G1PGH0_MYOLU

Genbank Protein ID

ENSMLUP00000009734

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02028454

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000010666.2	ENSMLUT00000010678.2	ENSMLUP00000009734.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-13	50.6	122	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+c+++  d + l s+sdD+ i  W++ t++
   Q: 122  GHDNKVNCIQWhRDnGCLYSCSDDKHIVEWNTQTCK 157
           8***********66699*********9866665554 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MAAGGGRVTE SLSSAGVPCA FSPHSQAFFA LASADGHLRV WETANNRLHL DKVPSTHFIG 60
TCTCAWPTRL QPRESPQRKK RKSEPIETSN QIDLLALGTA VGSILLYSTV KGELHSKLVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG GTGGCGGCCG GGTTACCGAG TCCCTGTCTT CCGCGGGGGT CCCCTGCGCC 60
TTCTCCCCGC ATAGTCAGGC CTTCTTCGCT TTGGCGTCTG CCGATGGTCA CCTGCGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	91.53	0.00e+00	1077.00
IUUC-Atr-002533	Amborella trichopoda	20.65	2.00e-22	100.00
IUUC-Apl-003242	Anas platyrhynchos	73.62	0.00e+00	803.00
IUUC-Aca-004607	Anolis carolinensis	69.41	0.00e+00	835.00
IUUC-Aly-006074	Arabidopsis lyrata	24.38	4.00e-14	73.20
IUUC-Ath-007222	Arabidopsis thaliana	24.38	9.00e-14	72.00
IUUC-Ame-011014	Astyanax mexicanus	52.65	9.00e-164	570.00
IUUC-Bta-012605	Bos taurus	90.82	0.00e+00	1087.00
IUUC-Bdi-014072	Brachypodium distachyon	20.68	8.00e-17	82.00
IUUC-Bol-016255	Brassica oleracea	24.04	1.00e-17	84.70
IUUC-Bra-016850	Brassica rapa	24.74	6.00e-19	89.40
IUUC-Cja-019620	Callithrix jacchus	86.87	0.00e+00	1095.00
IUUC-Cfa-020520	Canis familiaris	91.65	0.00e+00	1095.00
IUUC-Cpo-022456	Cavia porcellus	80.59	0.00e+00	1033.00
IUUC-Cho-024726	Choloepus hoffmanni	88.14	0.00e+00	1014.00
IUUC-Cin-025761	Ciona intestinalis	34.28	1.00e-91	330.00
IUUC-Dre-028051	Danio rerio	51.98	2.00e-171	596.00
IUUC-Dno-030031	Dasypus novemcinctus	88.65	0.00e+00	1061.00
IUUC-Dme-031653	Drosophila melanogaster	27.23	5.00e-42	165.00
IUUC-Ete-032863	Echinops telfairi	73.87	2.00e-96	347.00
IUUC-Eca-033243	Equus caballus	93.77	0.00e+00	962.00
IUUC-Eeu-034970	Erinaceus europaeus	88.10	0.00e+00	801.00
IUUC-Fca-036009	Felis catus	91.53	0.00e+00	1078.00
IUUC-Fal-037264	Ficedula albicollis	72.05	0.00e+00	779.00
IUUC-Gmo-039124	Gadus morhua	53.73	3.00e-170	592.00
IUUC-Gga-040862	Gallus gallus	70.65	0.00e+00	832.00
IUUC-Gac-041468	Gasterosteus aculeatus	52.71	9.00e-176	610.00
IUUC-Gma-042795	Glycine max	20.77	5.00e-10	59.70
IUUC-Ggo-044432	Gorilla gorilla	86.28	0.00e+00	1098.00
IUUC-Hsa-047036	Homo sapiens	89.98	0.00e+00	1082.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	88.48	0.00e+00	1055.00
IUUC-Lch-049553	Latimeria chalumnae	63.16	0.00e+00	719.00
IUUC-Laf-053462	Loxodonta africana	87.31	0.00e+00	1083.00
IUUC-Mcc-055239	Macaca mulatta	87.02	0.00e+00	1102.00
IUUC-Mtr-057977	Medicago truncatula	21.38	4.00e-16	79.70
IUUC-Mga-060079	Meleagris gallopavo	72.68	0.00e+00	776.00
IUUC-Mmr-061472	Microcebus murinus	88.48	0.00e+00	1068.00
IUUC-Mdo-061972	Monodelphis domestica	78.37	0.00e+00	963.00
IUUC-Mmu-063354	Mus musculus	83.78	0.00e+00	1000.00
IUUC-Mac-065064	Musa acuminata	24.45	5.00e-16	79.00
IUUC-Mpu-066877	Mustela putorius furo	90.82	0.00e+00	1091.00
IUUC-Nle-069119	Nomascus leucogenys	87.46	0.00e+00	1106.00
IUUC-Ont-072093	Oreochromis niloticus	53.57	0.00e+00	657.00
IUUC-Oan-072944	Ornithorhynchus anatinus	76.14	0.00e+00	838.00
IUUC-Ocu-074472	Oryctolagus cuniculus	88.80	0.00e+00	1031.00
IUUC-Oba-075009	Oryza barthii	21.99	3.00e-13	70.10
IUUC-Ogl-077189	Oryza glaberrima	21.30	2.00e-12	67.80
IUUC-Oin-079064	Oryza indica	22.40	4.00e-13	70.10
IUUC-Opu-083604	Oryza punctata	21.18	1.00e-11	65.10
IUUC-Oru-084620	Oryza rufipogon	22.28	5.00e-13	69.70
IUUC-Osa-085345	Oryza sativa	22.28	3.00e-13	70.50
IUUC-Ola-086626	Oryzias latipes	53.17	0.00e+00	648.00
IUUC-Oga-087911	Otolemur garnettii	88.47	0.00e+00	1053.00
IUUC-Ptr-091603	Pan troglodytes	89.82	0.00e+00	1080.00
IUUC-Pan-092569	Papio anubis	87.02	0.00e+00	1102.00
IUUC-Pma-094287	Petromyzon marinus	50.78	9.00e-176	610.00
IUUC-Ppa-095327	Physcomitrella patens	24.96	8.00e-37	148.00
IUUC-Pfo-097292	Poecilia formosa	52.81	4.00e-178	617.00
IUUC-Pab-097878	Pongo abelii	87.59	0.00e+00	1093.00
IUUC-Pop-099418	Populus trichocarpa	22.48	8.00e-19	88.60
IUUC-Pca-100941	Procavia capensis	82.25	0.00e+00	957.00
IUUC-Ppe-101779	Prunus persica	20.13	4.00e-18	86.30
IUUC-Pva-102493	Pteropus vampyrus	84.24	0.00e+00	994.00
IUUC-Rno-105084	Rattus norvegicus	84.47	0.00e+00	996.00
IUUC-Sha-107486	Sarcophilus harrisii	78.20	0.00e+00	960.00
IUUC-Smo-108825	Selaginella moellendorffii	21.81	3.00e-17	83.20
IUUC-Sit-110825	Setaria italica	22.54	9.00e-17	82.00
IUUC-Sly-111365	Solanum lycopersicum	23.23	1.00e-18	88.20
IUUC-Stu-112812	Solanum tuberosum	23.64	3.00e-17	83.20
IUUC-Sar-113326	Sorex araneus	85.60	1.00e-127	450.00
IUUC-Sbi-114426	Sorghum bicolor	22.58	3.00e-19	90.10
IUUC-Tgu-116726	Taeniopygia guttata	68.64	0.00e+00	816.00
IUUC-Tru-117848	Takifugu rubripes	52.41	5.00e-177	614.00
IUUC-Tsy-119091	Tarsius syrichta	63.72	1.00e-129	456.00
IUUC-Tni-120591	Tetraodon nigroviridis	53.74	1.00e-179	623.00
IUUC-Tca-121576	Theobroma cacao	21.04	3.00e-20	93.60
IUUC-Tae-125105	Triticum aestivum	21.99	6.00e-17	82.40
IUUC-Tbe-127832	Tupaia belangeri	92.94	0.00e+00	969.00
IUUC-Ttr-128812	Tursiops truncatus	93.32	0.00e+00	978.00
IUUC-Xma-133557	Xiphophorus maculatus	53.30	2.00e-178	619.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence