iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095289

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545025

Gene Name

PHYPADRAFT_137298

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S136_37V6	PP1S136_37V6.1	PP1S136_37V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-34	114.9	526	559
UBD/Beta-Prp	1.80e-46	159.4	261	455

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           gH++ v+++++   + ++++s+sdD+ti++W l+
   Q: 526  GHSGTVNSVSWnpVNpHMFASASDDHTIRIWGLS 559
           8***********944499*************975 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvh...tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetls 134
           ++l+ l+ h++ev+ ++fs+dg +l+++s+D t+ +w++   + ++   +l+gh++ v  +++sp++  l++ ++ +++++wd+ tg c + t +
   Q: 261  QTLQVLEMHDDEVWFLQFSHDGRYLASSSKDCTAIIWEVVEDDSLRvkfKLTGHSKPVSFVAWSPDDTMLLTCGNEEVVKLWDTATGLCKY-TYD 354
           45788999*****************************665444433111566*************99***********************9.655 PP
   S: 135  ghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           + ++  ++ ++ pdg+ +vsG+ D+++ +Wdl  g  l+ ++g+  ++++ l+++ +g ++vs+ + + +++++l+++   +++++ +++++s+ 
   Q: 355  KPNSCFTSCAWFPDGQRFVSGGGDKCIYMWDL-EGHELEAWKGARMPRINDLAITTDGSHMVSICDHKNIRIYNLEEK--TERVIEEEKPITSLS 446
           556666666677779*****************.7888899*9*9*******************************988..599999999999999 PP
   S: 230  fspnderlv 238
           +s+n+ +l+
   Q: 447  VSKNGRYLL 455
           999998875 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGGDNDVGQP PLKRQKLSKP SHITPLEGSR TGVVATGSAA LMARSIPIND GETVGSHGQI 60
RKVEFVRIIE QALFSLGYQQ AGAALEEESG IRLQSPAVQQ FREDILAGRW NECVTTLSRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTATGCTT TGTTGCAGCG CCATCGCTCC ACTCTTCCAT CGTTCCATCA CCAATCGCAT 60
TGCTCAACTT GTCGCCCTCC AGTCCTTCCT CATCTGCCCG TAAGTCGCTT TCTACATCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

KEGG

ppp:PHYPADRAFT_137298

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007549	Arabidopsis thaliana	51.03	2.00e-152	532.00
IUUC-Ago-007896	Ashbya gossypii	31.18	2.00e-22	100.00
IUUC-Bgr-012047	Blumeria graminis	36.70	4.00e-86	311.00
IUUC-Cho-024572	Choloepus hoffmanni	41.18	7.00e-58	217.00
IUUC-Csv-026251	Ciona savignyi	39.92	5.00e-91	327.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	35.08	7.00e-83	300.00
IUUC-Cme-027218	Cyanidioschyzon merolae	29.85	5.00e-67	248.00
IUUC-Dme-032077	Drosophila melanogaster	39.38	4.00e-95	341.00
IUUC-Fox-037720	Fusarium oxysporum	34.87	6.00e-84	304.00
IUUC-Ggr-039738	Gaeumannomyces graminis	36.24	7.00e-92	330.00
IUUC-Kpa-049141	Komagataella pastoris	29.92	1.00e-55	210.00
IUUC-Lpe-050963	Leersia perrieri	52.88	2.00e-169	588.00
IUUC-Mor-056939	Magnaporthe oryzae	37.38	3.00e-90	325.00
IUUC-Mpo-057600	Magnaporthe poae	36.10	5.00e-86	311.00
IUUC-Oba-075071	Oryza barthii	52.54	6.00e-170	590.00
IUUC-Obr-076614	Oryza brachyantha	53.83	3.00e-170	590.00
IUUC-Ogl-076963	Oryza glaberrima	54.46	2.00e-167	582.00
IUUC-Ogu-078436	Oryza glumaepatula	54.46	2.00e-167	582.00
IUUC-Oin-080021	Oryza indica	54.46	2.00e-167	581.00
IUUC-Olo-080298	Oryza longistaminata	54.46	1.00e-167	582.00
IUUC-Ome-081202	Oryza meridionalis	52.47	1.00e-169	588.00
IUUC-Oni-082604	Oryza nivara	52.54	8.00e-170	589.00
IUUC-Opu-083763	Oryza punctata	52.71	7.00e-170	589.00
IUUC-Oru-084243	Oryza rufipogon	52.54	8.00e-170	589.00
IUUC-Osa-086153	Oryza sativa	50.97	4.00e-142	497.00
IUUC-Pca-100574	Procavia capensis	49.25	3.00e-50	192.00
IUUC-Ppe-101227	Prunus persica	51.46	7.00e-161	559.00
IUUC-Ptt-103705	Puccinia triticina	27.58	1.00e-59	224.00
IUUC-Sja-107894	Schizosaccharomyces japonicus	37.60	5.00e-86	311.00
IUUC-Spo-108235	Schizosaccharomyces pombe	36.94	1.00e-86	313.00
IUUC-Smo-109054	Selaginella moellendorffii	66.48	0.00e+00	728.00
IUUC-Sit-110575	Setaria italica	52.11	4.00e-166	577.00
IUUC-Sly-111167	Solanum lycopersicum	50.86	1.00e-155	542.00
IUUC-Stu-112726	Solanum tuberosum	51.67	2.00e-157	548.00
IUUC-Sar-113539	Sorex araneus	48.28	6.00e-42	164.00
IUUC-Sbi-114344	Sorghum bicolor	51.12	4.00e-165	574.00
IUUC-Tsy-119284	Tarsius syrichta	32.84	2.00e-57	216.00
IUUC-Tvi-122376	Trichoderma virens	36.23	1.00e-55	209.00
IUUC-Vda-129770	Verticillium dahliae	35.85	5.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence