iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108700

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377587

Gene Name

SELMODRAFT_51852

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_51852	EFJ25424	EFJ25424

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-07	31.8	116	161
E3 activity/RING/RING	2.20e-15	57.6	119	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl 50
           e++C+        Pv++p+G+ +  ++++kw+a+g+k+c ++r  +
   Q: 116  ELICAFCQGSLDRPVTTPCGHNFCLKCLQKWFAQGQKKCGKCRVNF 161
           5666666667789************************999888665 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+ ++++ p+++pCgH f+++Clqkw     +++++ +C  Cr
   Q: 119  CAFCQGSLDR-PVTTPCGHNFCLKCLQKW-----FAQGQKKCGKCR 158
           **********.9*****************.....9*******9997 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MELACENGRC LVCKTEPPEQ ETLPCGSCGC VWHLPCLKAP MTLADVTPGW ACPDCSDDPA 60
SSSKKPGPSG GENELLRKIR EINADNSLSD AQKAAQRQML LSNGAVPAGK EDDEDELICA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCTCG CTTGCGAGAA TGGGAGGTGT CTGGTTTGCA AGACGGAGCC GCCAGAGCAA 60
GAAACCCTGC CTTGCGGGAG CTGCGGGTGT GTGTGGCACT TGCCATGCTT GAAGGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_51852

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mdo-062659	Monodelphis domestica	38.41	3.00e-47	182.00
IUUC-Pva-102266	Pteropus vampyrus	31.52	3.00e-42	166.00
IUUC-Sce-106362	Saccharomyces cerevisiae	36.36	2.00e-08	53.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence