• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Gga-041058
Ensembl Protein ID ENSGALP00000053353.1
UniProt Accession P0CG62; P02248; P02249; P02250; P62973; Q29120; Q91887; Q91888; UBB_CHICK
Genbank Protein ID AAA49128.1; CAA26488.1
Protein Name Polyubiquitin-B; Ubiquitin
Genbank Nucleotide ID M14693; X02650
Gene Name UBB
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000004509.5 ENSGALT00000061244.1 ENSGALP00000053353.1
ENSGALG00000004509.5 ENSGALT00000084941.1 ENSGALP00000063889.1
ENSGALG00000004509.5 ENSGALT00000082305.1 ENSGALP00000048414.1
ENSGALG00000004509.5 ENSGALT00000088526.1 ENSGALP00000063130.1
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/NEDD8 6.50e-165 536.2 229 304
ULD/UDP/UBQ/UBQ_PIM 3.40e-119 389.4 229 301
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
    m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
    89*************************************************************************9 PP
   


   ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
    m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++
   Q: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 301
    99********************************************************************986 PP
   

Organism Gallus gallus
Functional Description
(View)

Functional Description



     Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, DNA-damage responses as well as in signaling processes leading to activation of the transcription factor NF-kappa-B. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, DNA-damage responses as well as in signaling processes leading to activation of the transcription factor NF-kappa-B. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
Protein Sequence
(Fasta)
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE GIPPDQQRLI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Gga-041058|ULD,NEDD8;ULD,UBQ_PIM|Gallus gallus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAGTAGCCG TTTCACCGCA ACTCCAGATC CATCCGCACC CTCAGAAATT TTGGGGTTAT 60
TAAGGGTCTC AGCTCTCTGC CGAAGATATC AGGGACCCCT TTGCTCCTGG AAGAGGGATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Gga-041058|ULD,NEDD8;ULD,UBQ_PIM|Gallus gallus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0832--Ubl conjugation

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0043209--C:myelin sheath
GO:0005654--C:nucleoplasm
GO:0006281--P:DNA repair
GO:0097009--P:energy homeostasis
GO:0060613--P:fat pad development
GO:0008585--P:female gonad development
GO:0007144--P:female meiosis I
GO:0021888--P:hypothalamus gonadotrophin-releasing hormone neuron development
GO:0007141--P:male meiosis I
GO:0072520--P:seminiferous tubule development
GO:0019985--P:translesion synthesis
GO:0010992--P:ubiquitin homeostasis

KEGG gga:101747587
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000772 Aegilops tauschii 46.96 4.00e-47 183.00
IUUC-Apl-003614 Anas platyrhynchos 99.64 6.00e-157 545.00
IUUC-Aca-004901 Anolis carolinensis 100.00 1.00e-173 602.00
IUUC-Aly-006259 Arabidopsis lyrata 95.74 3.00e-168 583.00
IUUC-Ath-006600 Arabidopsis thaliana 95.74 4.00e-168 583.00
IUUC-Ago-007937 Ashbya gossypii 96.05 2.00e-167 581.00
IUUC-Acl-008108 Aspergillus clavatus 95.74 2.00e-167 581.00
IUUC-Afl-008740 Aspergillus flavus 96.05 1.00e-167 581.00
IUUC-Afu-009031 Aspergillus fumigatus 92.68 5.00e-165 573.00
IUUC-Ani-009444 Aspergillus nidulans 96.05 6.00e-167 579.00
IUUC-Ang-009646 Aspergillus niger 96.05 2.00e-166 577.00
IUUC-Aor-009964 Aspergillus oryzae 96.05 1.00e-167 581.00
IUUC-Ate-010298 Aspergillus terreus 96.05 1.00e-167 581.00
IUUC-Ame-011696 Astyanax mexicanus 97.04 4.00e-167 580.00
IUUC-Bta-012771 Bos taurus 99.67 9.00e-174 602.00
IUUC-Bci-013832 Botrytis cinerea 97.37 3.00e-169 586.00
IUUC-Bdi-015064 Brachypodium distachyon 96.05 7.00e-168 582.00
IUUC-Bol-016524 Brassica oleracea 95.74 3.00e-168 583.00
IUUC-Bra-017586 Brassica rapa 96.05 1.00e-124 437.00
IUUC-Cel-018571 Caenorhabditis elegans 98.68 1.00e-170 593.00
IUUC-Cja-019812 Callithrix jacchus 100.00 1.00e-173 602.00
IUUC-Cfa-020579 Canis familiaris 100.00 9.00e-174 602.00
IUUC-Cin-025600 Ciona intestinalis 96.05 5.00e-168 583.00
IUUC-Csv-026265 Ciona savignyi 94.74 1.00e-165 576.00
IUUC-Cgl-026543 Colletotrichum gloeosporioides 96.05 2.00e-124 437.00
IUUC-Cne-026938 Cryptococcus neoformans 97.37 8.00e-169 586.00
IUUC-Cme-027207 Cyanidioschyzon merolae 98.70 1.00e-40 157.00
IUUC-Dre-028552 Danio rerio 100.00 1.00e-173 602.00
IUUC-Dno-029812 Dasypus novemcinctus 100.00 9.00e-174 602.00
IUUC-Dor-031044 Dipodomys ordii 100.00 3.00e-77 279.00
IUUC-Dse-031434 Dothistroma septosporum 96.05 2.00e-124 437.00
IUUC-Dme-031687 Drosophila melanogaster 100.00 2.00e-173 602.00
IUUC-Fal-036678 Ficedula albicollis 99.67 3.00e-174 603.00
IUUC-Fox-037730 Fusarium oxysporum 95.61 5.00e-124 436.00
IUUC-Fso-038454 Fusarium solani 95.72 4.00e-167 580.00
IUUC-Ggr-040118 Gaeumannomyces graminis 96.05 2.00e-167 581.00
IUUC-Gac-042568 Gasterosteus aculeatus 100.00 2.00e-173 602.00
IUUC-Gma-043051 Glycine max 95.74 4.00e-168 584.00
IUUC-Ggo-044799 Gorilla gorilla 100.00 1.00e-173 602.00
IUUC-Hsa-046405 Homo sapiens 100.00 2.00e-173 602.00
IUUC-Hvu-047805 Hordeum vulgare 34.31 5.00e-39 154.00
IUUC-Kpa-049199 Komagataella pastoris 96.05 1.00e-167 581.00
IUUC-Lpe-050731 Leersia perrieri 34.74 8.00e-43 167.00
IUUC-Lma-053015 Leptosphaeria maculans 96.05 3.00e-167 580.00
IUUC-Laf-053548 Loxodonta africana 100.00 9.00e-174 602.00
IUUC-Mcc-055561 Macaca mulatta 100.00 3.00e-173 601.00
IUUC-Mor-056991 Magnaporthe oryzae 96.05 2.00e-167 581.00
IUUC-Mpo-057384 Magnaporthe poae 96.05 2.00e-167 581.00
IUUC-Mtr-058675 Medicago truncatula 96.07 2.00e-168 585.00
IUUC-Mla-058957 Melampsora laricipopulina 96.05 1.00e-167 582.00
IUUC-Mga-059240 Meleagris gallopavo 98.15 1.00e-88 318.00
IUUC-Mmr-061259 Microcebus murinus 94.74 2.00e-118 417.00
IUUC-Mdo-062630 Monodelphis domestica 100.00 2.00e-173 602.00
IUUC-Mmu-064367 Mus musculus 100.00 1.00e-174 605.00
IUUC-Mpu-066106 Mustela putorius furo 83.61 2.00e-138 484.00
IUUC-Mlu-068100 Myotis lucifugus 100.00 9.00e-174 602.00
IUUC-Nfi-068475 Neosartorya fischeri 95.74 2.00e-167 581.00
IUUC-Ncr-068770 Neurospora crassa 96.05 6.00e-166 576.00
IUUC-Nle-069526 Nomascus leucogenys 100.00 9.00e-174 602.00
IUUC-Opr-070947 Ochotona princeps 100.00 7.00e-130 455.00
IUUC-Oan-073470 Ornithorhynchus anatinus 100.00 1.00e-173 602.00
IUUC-Oba-075152 Oryza barthii 34.43 2.00e-41 162.00
IUUC-Obr-076626 Oryza brachyantha 96.05 6.00e-168 583.00
IUUC-Ogl-077274 Oryza glaberrima 89.14 3.00e-151 527.00
IUUC-Oin-079436 Oryza indica 96.05 1.00e-167 582.00
IUUC-Olo-080418 Oryza longistaminata 34.47 7.00e-31 127.00
IUUC-Ome-081397 Oryza meridionalis 34.10 7.00e-41 160.00
IUUC-Oni-082299 Oryza nivara 33.77 2.00e-40 159.00
IUUC-Opu-083917 Oryza punctata 32.21 6.00e-30 125.00
IUUC-Oru-084963 Oryza rufipogon 78.43 1.00e-60 224.00
IUUC-Osa-085789 Oryza sativa 96.05 2.00e-167 582.00
IUUC-Ola-087192 Oryzias latipes 99.67 3.00e-171 594.00
IUUC-Olu-087888 Ostreococcus lucimarinus 96.05 1.00e-167 582.00
IUUC-Oar-089386 Ovis aries 100.00 1.00e-168 586.00
IUUC-Ptr-091261 Pan troglodytes 100.00 9.00e-174 602.00
IUUC-Pan-092134 Papio anubis 100.00 2.00e-173 602.00
IUUC-Psi-093239 Pelodiscus sinensis 76.90 1.00e-131 462.00
IUUC-Pma-094556 Petromyzon marinus 100.00 8.00e-174 602.00
IUUC-Ppa-095512 Physcomitrella patens 95.07 4.00e-166 576.00
IUUC-Pfo-096371 Poecilia formosa 95.44 2.00e-130 457.00
IUUC-Pab-097884 Pongo abelii 100.00 4.00e-173 601.00
IUUC-Pop-099396 Populus trichocarpa 96.07 1.00e-168 585.00
IUUC-Pca-100992 Procavia capensis 100.00 2.00e-173 602.00
IUUC-Ppe-101604 Prunus persica 95.74 4.00e-168 583.00
IUUC-Pgr-103301 Puccinia graminis 96.05 2.00e-167 582.00
IUUC-Ptt-103710 Puccinia triticina 96.05 5.00e-168 583.00
IUUC-Pte-104277 Pyrenophora teres 96.05 2.00e-124 437.00
IUUC-Pyt-104779 Pyrenophora triticirepentis 96.05 2.00e-124 437.00
IUUC-Rno-105199 Rattus norvegicus 100.00 2.00e-173 602.00
IUUC-Sce-106142 Saccharomyces cerevisiae 96.05 3.00e-167 580.00
IUUC-Sha-106780 Sarcophilus harrisii 99.01 2.00e-170 590.00
IUUC-Sja-107825 Schizosaccharomyces japonicus 96.07 3.00e-168 583.00
IUUC-Spo-108219 Schizosaccharomyces pombe 96.05 2.00e-167 581.00
IUUC-Ssl-108565 Sclerotinia sclerotiorum 97.04 3.00e-168 583.00
IUUC-Smo-108834 Selaginella moellendorffii 94.74 2.00e-165 574.00
IUUC-Sit-110644 Setaria italica 96.05 7.00e-168 583.00
IUUC-Sly-111036 Solanum lycopersicum 95.74 4.00e-168 583.00
IUUC-Stu-112687 Solanum tuberosum 95.74 4.00e-168 583.00
IUUC-Sbi-114343 Sorghum bicolor 96.05 7.00e-168 582.00
IUUC-Ssc-115672 Sus scrofa 99.67 1.00e-173 602.00
IUUC-Tgu-116620 Taeniopygia guttata 95.86 1.00e-154 538.00
IUUC-Tsy-119558 Tarsius syrichta 89.54 5.00e-74 269.00
IUUC-Tca-121145 Theobroma cacao 96.05 5.00e-168 583.00
IUUC-Tre-122012 Trichoderma reesei 96.05 2.00e-167 581.00
IUUC-Tvi-122369 Trichoderma virens 96.05 2.00e-167 581.00
IUUC-Tae-125795 Triticum aestivum 96.05 2.00e-168 584.00
IUUC-Tur-126561 Triticum urartu 95.74 4.00e-168 583.00
IUUC-Tme-127032 Tuber melanosporum 96.05 1.00e-167 581.00
IUUC-Ttr-128311 Tursiops truncatus 100.00 2.00e-173 601.00
IUUC-Uma-129417 Ustilago maydis 97.37 8.00e-169 586.00
IUUC-Vda-129663 Verticillium dahliae 96.05 2.00e-124 437.00
IUUC-Vvi-131604 Vitis vinifera 96.05 4.00e-168 583.00
IUUC-Xtr-132052 Xenopus tropicalis 100.00 2.00e-173 602.00
IUUC-Yli-134420 Yarrowia lipolytica 96.05 3.00e-167 581.00
IUUC-Zma-135889 Zea mays 96.07 1.00e-168 585.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved