iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006303

Ensembl Protein ID

fgenesh1_pg.C_scaffold_5000974

UniProt Accession

D7LNJ3; D7LNJ3_ARALL

Genbank Protein ID

EFH51962.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_347582

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_5000974	fgenesh1_pg.C_scaffold_5000974	fgenesh1_pg.C_scaffold_5000974

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-25	88.2	308	347
E3 adaptor/Cullin RING/APC_C/CDC20	6.90e-128	426.9	130	429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGs..dDgtikvWDlrtgvll 36
           Ht+ v +la+   +++ll++G+   D tik W++rtg +l
   Q: 308  HTSAVKALAWcpfQSGLLATGGggEDRTIKFWNTRTGACL 347
           9**********9855*****5555*************997 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeve 79
           e+ ldap++ ddfylnLldW+s nvla+aLg++vylw+a++g+vs+l  + e+   vts++w ++g  lavG +++ev+
   Q: 130  ERALDAPDIVDDFYLNLLDWGSANVLAIALGRTVYLWDASNGSVSELVTVdEDMGPVTSINWAQDGLNLAVGLDNSEVQ 208
           588***********************************************777889*********************** PP
   S: 80   iyDveekkkvrtl.tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGn 157
           ++D  +++kvrtl  gh++rvg+L+Wn+++l++G+ dg+i  +dvrv+ + ++t+++h+ evCGlkw+e++++LasGGn
   Q: 209  LWDSVASRKVRTLkGGHQSRVGSLAWNNHILTTGGMDGKIINNDVRVRSHVVKTYRGHTLEVCGLKWSESGQHLASGGN 287
           *************778*************************************************************** PP
   S: 158  DnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskksk 236
           Dn v+vw++s+++ l++f+eh++avka+aw+P+q++lLa+GGG +Dr+ikfwnt tga+l+++dtgsqvcsl+wskk++
   Q: 288  DNLVNVWEHSTRRSLHRFEEHTSAVKALAWCPFQSGLLATGGGGEDRTIKFWNTRTGACLNSVDTGSQVCSLIWSKKER 366
           ******************************************************************************* PP
   S: 237  elvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdk 299
           el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl+++ spdg ++++aagDetlr+w++f  
   Q: 367  ELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLYMSQSPDGCTVASAAGDETLRLWNVFGV 429
           ************************************************************975 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDSGINTSSR LNPQARCPLQ RNFLPKNTSK ENPERFIPNR SAMDFDYAHF QLTEGRNEKD 60
EATKVRSSPS REAYRKQLAE TMNLNRTRIL AFRNKPQAPV QLLPREHSVY SLYQQPKSVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCAG GTATCAACAC TTCTTCTCGC TTGAACCCTC AAGCTCGATG CCCACTTCAA 60
CGAAACTTCC TCCCCAAGAA TACTTCCAAA GAAAACGTAT GTTTTTTTAT TTGCTTATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

aly:ARALYDRAFT_347582

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001545	Ailuropoda melanoleuca	48.77	5.00e-106	377.00
IUUC-Dse-031391	Dothistroma septosporum	48.28	2.00e-95	342.00
IUUC-Gac-041431	Gasterosteus aculeatus	44.02	2.00e-97	348.00
IUUC-Loc-052638	Lepisosteus oculatus	43.78	1.00e-88	319.00
IUUC-Mmr-061615	Microcebus murinus	49.26	1.00e-106	379.00
IUUC-Mmu-063864	Mus musculus	49.02	6.00e-101	360.00
IUUC-Mpu-066502	Mustela putorius furo	48.39	9.00e-108	383.00
IUUC-Mlu-067277	Myotis lucifugus	46.95	9.00e-105	373.00
IUUC-Oan-073677	Ornithorhynchus anatinus	50.13	7.00e-99	353.00
IUUC-Oar-090023	Ovis aries	48.76	2.00e-102	365.00
IUUC-Sha-107472	Sarcophilus harrisii	46.93	3.00e-101	361.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence