iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107649

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01020427

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000004224.1	ENSSHAT00000004861.1	ENSSHAP00000004813.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-53	174.6	224	260
UBD/Beta-Prp	5.00e-77	259.2	136	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gH++ v+c++f +++ll+sGs+D+ti++W++ tg+ll
   Q: 224  GHKGNVSCVCFsPSGLLASGSWDKTIRIWNPETGKLL 260
           8**********977*******************9986 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.tlsg 135
           l+gh+ +v +v+fs+d++ l++g+ D+ + +w+++tg++++ l gh+d + s +fsp++++l++Gs+d t+rvwdl++  ++++ +l+g
   Q: 136  LKGHSRGVETVSFSSDSNQLASGGWDHKVILWEVQTGQIIIQLLGHQDAIQSSDFSPNSEYLATGSWDATVRVWDLRSLDKIKNkVLEG 224
           79****************************************************************************9999888**** PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdn 224
           h+g v+cv+++p + ll+sGs D+t+r+W+ +tgkll +l g h   v+s++f+ +g +++s  +   vk+wd+ tg+c ++l+g  + 
   Q: 225  HKGNVSCVCFSP-SGLLASGSWDKTIRIWNPETGKLLAKLLG-HLTWVKSMAFSADGLRMASSEYSEMVKIWDCTTGKCTESLRGVLEV 311
           ************.89**************************9.********************************************** PP
   S: 225  vksvrfspnderlvsgssD 243
             + +f+p++++lvsgs+D
   Q: 312  AHVCAFTPDGKLLVSGSAD 330
           *****************98 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MPAVRGKFRD RGPRDRSPHK ARSETTSESS IQAPPTPPKD WAPLTVGSIK YFSRHKGEVN 60
SCAFSPDTRI LLTCCDDNKV YMWGARTGNL LRRLPGHTAP VLFCRFSPDG RFFASASRDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCAGGGAT TACAAAGTTT ATTGTCCTCA TTTTTACAGC TGAGTAAACA GAGTCTCAAA 60
AAAGGACCAT GGAAAGCTGG CTTTGGCTCC GAGTTACATA TTTAGTGGCG AAGCCCAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	65.28	3.00e-110	391.00
IUUC-Ame-010858	Astyanax mexicanus	52.60	1.00e-83	302.00
IUUC-Bta-012352	Bos taurus	65.62	7.00e-113	399.00
IUUC-Cja-019585	Callithrix jacchus	63.45	1.00e-109	389.00
IUUC-Cfa-020062	Canis familiaris	62.04	4.00e-93	333.00
IUUC-Csa-023528	Chlorocebus sabaeus	65.17	2.00e-111	395.00
IUUC-Cin-025426	Ciona intestinalis	41.06	2.00e-63	236.00
IUUC-Dre-027740	Danio rerio	53.43	2.00e-56	211.00
IUUC-Dno-030012	Dasypus novemcinctus	55.42	2.00e-103	368.00
IUUC-Dor-030536	Dipodomys ordii	55.40	3.00e-85	308.00
IUUC-Ete-032871	Echinops telfairi	68.40	6.00e-90	323.00
IUUC-Eca-033729	Equus caballus	65.16	5.00e-113	400.00
IUUC-Eeu-034740	Erinaceus europaeus	63.89	3.00e-109	387.00
IUUC-Fca-036514	Felis catus	63.19	2.00e-110	391.00
IUUC-Ggo-044793	Gorilla gorilla	63.45	1.00e-107	382.00
IUUC-Hsa-046414	Homo sapiens	64.60	4.00e-109	387.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	59.86	3.00e-93	334.00
IUUC-Lch-049905	Latimeria chalumnae	56.10	8.00e-97	346.00
IUUC-Loc-052101	Lepisosteus oculatus	56.27	9.00e-95	339.00
IUUC-Laf-053443	Loxodonta africana	61.51	7.00e-105	373.00
IUUC-Mcc-055346	Macaca mulatta	65.86	1.00e-112	398.00
IUUC-Meu-056531	Macropus eugenii	85.34	2.00e-115	407.00
IUUC-Mvi-060368	Microbotryum violaceum	31.63	2.00e-32	134.00
IUUC-Mmr-061721	Microcebus murinus	61.92	1.00e-108	385.00
IUUC-Mdo-062379	Monodelphis domestica	76.06	2.00e-147	515.00
IUUC-Mmu-064175	Mus musculus	59.53	2.00e-102	364.00
IUUC-Mpu-066361	Mustela putorius furo	65.52	6.00e-112	396.00
IUUC-Mlu-067300	Myotis lucifugus	49.83	4.00e-71	261.00
IUUC-Ncr-068753	Neurospora crassa	31.56	3.00e-34	140.00
IUUC-Nle-070150	Nomascus leucogenys	65.29	7.00e-110	389.00
IUUC-Opr-071060	Ochotona princeps	56.25	1.00e-80	292.00
IUUC-Ocu-074101	Oryctolagus cuniculus	63.21	5.00e-108	384.00
IUUC-Oga-088479	Otolemur garnettii	62.72	7.00e-106	376.00
IUUC-Oar-089608	Ovis aries	60.94	3.00e-112	398.00
IUUC-Ptr-091521	Pan troglodytes	65.52	2.00e-111	395.00
IUUC-Pan-092092	Papio anubis	65.86	1.00e-112	399.00
IUUC-Pab-098454	Pongo abelii	64.83	2.00e-110	392.00
IUUC-Pca-100981	Procavia capensis	64.24	1.00e-108	385.00
IUUC-Pva-102491	Pteropus vampyrus	67.24	1.00e-115	409.00
IUUC-Rno-105417	Rattus norvegicus	64.23	4.00e-100	357.00
IUUC-Sar-113110	Sorex araneus	53.66	4.00e-67	247.00
IUUC-Ssc-116197	Sus scrofa	65.28	9.00e-113	399.00
IUUC-Tbe-127734	Tupaia belangeri	64.85	2.00e-62	232.00
IUUC-Ttr-128709	Tursiops truncatus	61.67	3.00e-101	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence