iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000004304.1	ENSSHAT00000004959.1	ENSSHAP00000004910.1
ENSSHAG00000004304.1	ENSSHAT00000004960.1	ENSSHAP00000004911.1
ENSSHAG00000004304.1	ENSSHAT00000004962.1	ENSSHAP00000004913.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.70e-34	114.1	365	403

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+ +vt++++  +d t ++++sdD+t+kvW+l++g  +
   Q: 365  GHSQEVTSVCWcpTDfTKIATCSDDNTMKVWRLKRGLEE 403
           8***********888******************998765 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MCLSSLLRRG NLLFFILGSS SQYPLQSLLT GYQCNYNDDH ISYGEMGVPV PPFGCTFSTA 60
PNLDHILAVA NEEGFVRLYN TESRNCRKKF FQEWMAHWNA IFDLAWVPGE HRLVTASGDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGTTTAA GTAGCCTGTT GAGGAGAGGT GGGGGGGGGG CAGGGAAGAA AGGGGGAAAA 60
TAAAGTAAAA AGGACAGAGT AGACAACCAA AGAAAACCTT CAAGGAAGCA AAGAAAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0031464--C:Cul4A-RING E3 ubiquitin ligase complex
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0031572--P:G2 DNA damage checkpoint
GO:0006513--P:protein monoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0009411--P:response to UV
GO:0019985--P:translesion synthesis
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002111	Ailuropoda melanoleuca	70.49	0.00e+00	947.00
IUUC-Atr-003097	Amborella trichopoda	35.36	5.00e-61	228.00
IUUC-Apl-004088	Anas platyrhynchos	62.79	0.00e+00	833.00
IUUC-Aca-004732	Anolis carolinensis	55.00	0.00e+00	704.00
IUUC-Aly-005686	Arabidopsis lyrata	34.52	2.00e-57	216.00
IUUC-Ath-006970	Arabidopsis thaliana	34.69	1.00e-56	214.00
IUUC-Acl-008219	Aspergillus clavatus	24.15	9.00e-24	105.00
IUUC-Afl-008558	Aspergillus flavus	33.12	1.00e-15	77.40
IUUC-Afu-008784	Aspergillus fumigatus	24.77	4.00e-23	102.00
IUUC-Ani-009304	Aspergillus nidulans	23.92	4.00e-20	93.20
IUUC-Ang-009842	Aspergillus niger	25.00	6.00e-24	105.00
IUUC-Aor-009883	Aspergillus oryzae	25.55	1.00e-23	104.00
IUUC-Ate-010454	Aspergillus terreus	26.85	1.00e-23	103.00
IUUC-Ame-010949	Astyanax mexicanus	47.11	5.00e-164	571.00
IUUC-Bta-012333	Bos taurus	69.81	0.00e+00	947.00
IUUC-Bci-013733	Botrytis cinerea	27.22	7.00e-23	102.00
IUUC-Bdi-014494	Brachypodium distachyon	35.23	1.00e-54	207.00
IUUC-Bol-015301	Brassica oleracea	35.22	4.00e-55	208.00
IUUC-Bra-017384	Brassica rapa	34.42	8.00e-58	218.00
IUUC-Cel-018498	Caenorhabditis elegans	27.17	8.00e-30	125.00
IUUC-Cja-019534	Callithrix jacchus	70.03	0.00e+00	962.00
IUUC-Cfa-020847	Canis familiaris	68.73	0.00e+00	921.00
IUUC-Cpo-021695	Cavia porcellus	69.44	0.00e+00	932.00
IUUC-Cre-022762	Chlamydomonas reinhardtii	29.11	8.00e-42	166.00
IUUC-Csa-023748	Chlorocebus sabaeus	69.81	0.00e+00	946.00
IUUC-Cho-024445	Choloepus hoffmanni	58.22	0.00e+00	727.00
IUUC-Cgl-026664	Colletotrichum gloeosporioides	23.79	1.00e-17	85.10
IUUC-Dre-027536	Danio rerio	45.74	8.00e-162	563.00
IUUC-Dno-030035	Dasypus novemcinctus	64.12	0.00e+00	891.00
IUUC-Dor-030814	Dipodomys ordii	53.61	3.00e-82	299.00
IUUC-Dse-031354	Dothistroma septosporum	25.06	1.00e-28	121.00
IUUC-Dme-031691	Drosophila melanogaster	40.54	5.00e-76	278.00
IUUC-Ete-032814	Echinops telfairi	65.40	0.00e+00	656.00
IUUC-Eca-033332	Equus caballus	70.22	0.00e+00	940.00
IUUC-Fca-035571	Felis catus	69.81	0.00e+00	928.00
IUUC-Fal-037421	Ficedula albicollis	59.94	0.00e+00	796.00
IUUC-Fox-038069	Fusarium oxysporum	24.70	5.00e-18	85.90
IUUC-Fso-038192	Fusarium solani	24.62	1.00e-17	85.10
IUUC-Gmo-039365	Gadus morhua	59.96	7.00e-159	553.00
IUUC-Ggr-039904	Gaeumannomyces graminis	24.43	1.00e-15	78.20
IUUC-Gga-041153	Gallus gallus	60.00	0.00e+00	797.00
IUUC-Gac-041984	Gasterosteus aculeatus	46.10	1.00e-166	579.00
IUUC-Gma-043734	Glycine max	32.65	1.00e-53	204.00
IUUC-Ggo-044419	Gorilla gorilla	69.81	0.00e+00	950.00
IUUC-Hsa-045862	Homo sapiens	69.68	0.00e+00	943.00
IUUC-Hvu-047728	Hordeum vulgare	33.87	3.00e-57	215.00
IUUC-Itr-048786	Ictidomys tridecemlineatus	68.87	0.00e+00	946.00
IUUC-Lch-050616	Latimeria chalumnae	54.57	0.00e+00	679.00
IUUC-Lpe-051222	Leersia perrieri	33.88	1.00e-56	213.00
IUUC-Loc-052564	Lepisosteus oculatus	51.91	9.00e-179	620.00
IUUC-Lma-053098	Leptosphaeria maculans	25.06	2.00e-25	110.00
IUUC-Laf-053892	Loxodonta africana	68.82	0.00e+00	928.00
IUUC-Mcc-055854	Macaca mulatta	69.81	0.00e+00	945.00
IUUC-Mor-057144	Magnaporthe oryzae	26.60	2.00e-17	84.30
IUUC-Mpo-057501	Magnaporthe poae	27.55	1.00e-13	71.60
IUUC-Mtr-058510	Medicago truncatula	35.16	5.00e-52	198.00
IUUC-Mla-058823	Melampsora laricipopulina	26.01	1.00e-20	94.40
IUUC-Mga-060128	Meleagris gallopavo	60.94	0.00e+00	804.00
IUUC-Mvi-060475	Microbotryum violaceum	30.11	1.00e-36	148.00
IUUC-Mmr-061331	Microcebus murinus	69.81	0.00e+00	936.00
IUUC-Mdo-063020	Monodelphis domestica	87.01	0.00e+00	1211.00
IUUC-Mmu-063713	Mus musculus	66.44	0.00e+00	866.00
IUUC-Mac-064653	Musa acuminata	34.68	8.00e-56	211.00
IUUC-Mpu-066490	Mustela putorius furo	69.81	0.00e+00	929.00
IUUC-Mlu-067900	Myotis lucifugus	68.73	0.00e+00	912.00
IUUC-Nfi-068433	Neosartorya fischeri	25.23	7.00e-24	105.00
IUUC-Ncr-068776	Neurospora crassa	27.82	4.00e-27	116.00
IUUC-Nle-069675	Nomascus leucogenys	66.35	0.00e+00	862.00
IUUC-Opr-070769	Ochotona princeps	52.50	8.00e-125	441.00
IUUC-Ont-071441	Oreochromis niloticus	62.12	2.00e-151	529.00
IUUC-Oan-072757	Ornithorhynchus anatinus	71.99	0.00e+00	931.00
IUUC-Ocu-074670	Oryctolagus cuniculus	70.22	0.00e+00	934.00
IUUC-Oba-075844	Oryza barthii	33.33	2.00e-54	206.00
IUUC-Obr-076625	Oryza brachyantha	33.88	4.00e-57	215.00
IUUC-Ogl-077771	Oryza glaberrima	33.33	1.00e-54	207.00
IUUC-Ogu-078475	Oryza glumaepatula	31.44	8.00e-47	181.00
IUUC-Oin-079958	Oryza indica	33.33	1.00e-54	207.00
IUUC-Olo-080311	Oryza longistaminata	33.55	9.00e-45	174.00
IUUC-Ome-081985	Oryza meridionalis	32.79	1.00e-53	203.00
IUUC-Oni-082921	Oryza nivara	33.33	1.00e-54	207.00
IUUC-Opu-083174	Oryza punctata	32.89	8.00e-54	204.00
IUUC-Oru-084338	Oryza rufipogon	32.40	1.00e-55	210.00
IUUC-Osa-085609	Oryza sativa	42.35	3.00e-18	85.10
IUUC-Olu-087907	Ostreococcus lucimarinus	24.49	3.00e-22	99.40
IUUC-Oga-088358	Otolemur garnettii	70.08	0.00e+00	966.00
IUUC-Oar-089994	Ovis aries	69.00	0.00e+00	939.00
IUUC-Ptr-091338	Pan troglodytes	69.81	0.00e+00	957.00
IUUC-Pan-091759	Papio anubis	69.95	0.00e+00	954.00
IUUC-Psi-093211	Pelodiscus sinensis	59.71	0.00e+00	732.00
IUUC-Pma-094588	Petromyzon marinus	57.58	3.00e-93	334.00
IUUC-Pno-094964	Phaeosphaeria nodorum	25.11	1.00e-26	114.00
IUUC-Ppa-095159	Physcomitrella patens	37.33	2.00e-60	226.00
IUUC-Pfo-096592	Poecilia formosa	43.41	1.00e-146	513.00
IUUC-Pab-098597	Pongo abelii	56.74	0.00e+00	677.00
IUUC-Pop-099255	Populus trichocarpa	36.36	1.00e-59	223.00
IUUC-Pca-100593	Procavia capensis	58.49	0.00e+00	697.00
IUUC-Ppe-101333	Prunus persica	33.52	4.00e-52	198.00
IUUC-Pva-102283	Pteropus vampyrus	66.85	0.00e+00	876.00
IUUC-Pgr-103383	Puccinia graminis	28.37	1.00e-21	97.80
IUUC-Ptt-103974	Puccinia triticina	30.30	9.00e-20	91.30
IUUC-Pte-104329	Pyrenophora teres	25.34	1.00e-23	104.00
IUUC-Pyt-104424	Pyrenophora triticirepentis	28.62	4.00e-23	102.00
IUUC-Rno-105720	Rattus norvegicus	65.72	0.00e+00	862.00
IUUC-Sja-107723	Schizosaccharomyces japonicus	27.72	1.00e-27	117.00
IUUC-Spo-108060	Schizosaccharomyces pombe	26.54	2.00e-19	90.50
IUUC-Ssl-108481	Sclerotinia sclerotiorum	26.80	1.00e-20	95.10
IUUC-Sit-109862	Setaria italica	34.42	7.00e-55	207.00
IUUC-Sly-111468	Solanum lycopersicum	34.50	4.00e-57	215.00
IUUC-Stu-112346	Solanum tuberosum	34.24	9.00e-55	207.00
IUUC-Sar-113734	Sorex araneus	70.54	7.00e-90	324.00
IUUC-Sbi-114076	Sorghum bicolor	33.88	1.00e-56	214.00
IUUC-Sre-114918	Sporisorium reilianum	22.77	8.00e-13	68.90
IUUC-Ssc-115561	Sus scrofa	70.49	0.00e+00	972.00
IUUC-Tgu-117011	Taeniopygia guttata	60.44	0.00e+00	798.00
IUUC-Tru-118411	Takifugu rubripes	58.80	5.00e-153	534.00
IUUC-Tsy-119367	Tarsius syrichta	60.51	0.00e+00	760.00
IUUC-Tni-120301	Tetraodon nigroviridis	59.95	3.00e-149	521.00
IUUC-Tca-121265	Theobroma cacao	37.40	5.00e-61	228.00
IUUC-Tre-121997	Trichoderma reesei	26.64	4.00e-19	89.70
IUUC-Tvi-122292	Trichoderma virens	26.14	3.00e-20	93.60
IUUC-Tae-123660	Triticum aestivum	32.79	2.00e-55	209.00
IUUC-Tur-126794	Triticum urartu	31.79	5.00e-40	158.00
IUUC-Tme-127090	Tuber melanosporum	26.25	1.00e-19	90.50
IUUC-Tbe-127646	Tupaia belangeri	75.47	0.00e+00	659.00
IUUC-Ttr-128171	Tursiops truncatus	70.22	0.00e+00	958.00
IUUC-Uma-129525	Ustilago maydis	23.29	1.00e-16	82.00
IUUC-Vda-129871	Verticillium dahliae	24.76	1.00e-20	95.10
IUUC-Vpa-130554	Vicugna pacos	77.17	5.00e-99	355.00
IUUC-Vvi-131698	Vitis vinifera	36.24	1.00e-58	220.00
IUUC-Xtr-131962	Xenopus tropicalis	54.52	0.00e+00	727.00
IUUC-Xma-133803	Xiphophorus maculatus	46.43	2.00e-156	545.00
IUUC-Zma-135932	Zea mays	33.42	9.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence