iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048206

Ensembl Protein ID

ENSSTOP00000018574.1

UniProt Accession

I3N2H8; I3N2H8_ICTTR

Genbank Protein ID

ENSSTOP00000018574

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01106994

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000027754.1	ENSSTOT00000022812.1	ENSSTOP00000018574.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-26	91.5	239	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt +v+ ++f s+  ll++G++Dg+i++WD+++ v 
   Q: 239  GHTLGVSQVCFlSEsYLLLTGGNDGKIMLWDVSREVE 275
           8999********88899**************988776 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCVNASK DGLVASGAEG GDLVIWGEDG TLLGHMQFQG TDDVTSVLFS 60
PSCPTKLYAS HGETISILDV RSLKDSLDHF HVNEEEINCL SLNETENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAGAGTCT TCAGGGCCAT TATGGCAGTG AAGTGGACTG GTGGACATTC TTCTCCTATT 60
CTCTGCGTGA ATGCAAGTAA AGACGGGCTA GTGGCTTCTG GAGCAGAGGG TGGAGATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	24.03	1.00e-16	80.90
IUUC-Aml-001203	Ailuropoda melanoleuca	91.88	0.00e+00	645.00
IUUC-Atr-002680	Amborella trichopoda	26.27	3.00e-24	105.00
IUUC-Apl-003656	Anas platyrhynchos	58.26	1.00e-105	375.00
IUUC-Aca-004987	Anolis carolinensis	64.90	1.00e-128	452.00
IUUC-Aly-006254	Arabidopsis lyrata	32.46	9.00e-30	124.00
IUUC-Ath-006632	Arabidopsis thaliana	30.65	1.00e-27	116.00
IUUC-Ame-011032	Astyanax mexicanus	46.49	1.00e-93	335.00
IUUC-Bta-012588	Bos taurus	84.59	1.00e-168	584.00
IUUC-Bdi-014532	Brachypodium distachyon	27.42	4.00e-28	118.00
IUUC-Bol-015542	Brassica oleracea	29.35	5.00e-22	99.40
IUUC-Bra-017046	Brassica rapa	32.03	2.00e-29	124.00
IUUC-Cja-019365	Callithrix jacchus	92.44	0.00e+00	681.00
IUUC-Cfa-021090	Canis familiaris	91.04	0.00e+00	644.00
IUUC-Cpo-021517	Cavia porcellus	85.47	0.00e+00	634.00
IUUC-Csa-023041	Chlorocebus sabaeus	92.16	0.00e+00	655.00
IUUC-Cho-024801	Choloepus hoffmanni	90.48	0.00e+00	666.00
IUUC-Dre-028437	Danio rerio	48.53	8.00e-91	326.00
IUUC-Dno-029267	Dasypus novemcinctus	90.76	0.00e+00	671.00
IUUC-Ete-032726	Echinops telfairi	73.95	9.00e-152	529.00
IUUC-Eca-033621	Equus caballus	92.70	6.00e-180	622.00
IUUC-Eeu-034461	Erinaceus europaeus	78.43	1.00e-164	572.00
IUUC-Fca-036410	Felis catus	91.83	0.00e+00	641.00
IUUC-Fal-036676	Ficedula albicollis	64.71	3.00e-130	457.00
IUUC-Gmo-039597	Gadus morhua	37.24	3.00e-21	95.50
IUUC-Gga-040760	Gallus gallus	65.33	2.00e-73	267.00
IUUC-Gac-041905	Gasterosteus aculeatus	50.00	6.00e-95	340.00
IUUC-Gma-043066	Glycine max	30.00	1.00e-16	80.50
IUUC-Ggo-044881	Gorilla gorilla	91.88	0.00e+00	652.00
IUUC-Hsa-046836	Homo sapiens	91.60	0.00e+00	648.00
IUUC-Hvu-047651	Hordeum vulgare	26.03	5.00e-25	108.00
IUUC-Lch-050406	Latimeria chalumnae	52.82	1.00e-92	332.00
IUUC-Lpe-051023	Leersia perrieri	22.38	5.00e-10	58.50
IUUC-Loc-052878	Lepisosteus oculatus	53.04	5.00e-99	353.00
IUUC-Laf-053547	Loxodonta africana	88.24	0.00e+00	641.00
IUUC-Mcc-054646	Macaca mulatta	91.60	0.00e+00	651.00
IUUC-Meu-056381	Macropus eugenii	77.31	9.00e-163	565.00
IUUC-Mtr-058656	Medicago truncatula	27.04	1.00e-18	87.00
IUUC-Mmr-061601	Microcebus murinus	91.60	0.00e+00	674.00
IUUC-Mdo-062305	Monodelphis domestica	78.15	2.00e-166	577.00
IUUC-Mmu-063213	Mus musculus	84.87	3.00e-172	597.00
IUUC-Mac-064940	Musa acuminata	24.50	3.00e-29	122.00
IUUC-Mpu-066629	Mustela putorius furo	91.04	0.00e+00	645.00
IUUC-Nle-069860	Nomascus leucogenys	91.60	0.00e+00	648.00
IUUC-Opr-071180	Ochotona princeps	85.07	6.00e-157	546.00
IUUC-Ont-071912	Oreochromis niloticus	47.67	2.00e-102	365.00
IUUC-Ocu-074874	Oryctolagus cuniculus	89.64	0.00e+00	665.00
IUUC-Oba-075815	Oryza barthii	25.81	6.00e-15	74.70
IUUC-Obr-076835	Oryza brachyantha	33.33	5.00e-20	91.30
IUUC-Ogu-077977	Oryza glumaepatula	29.21	9.00e-14	70.90
IUUC-Oin-079206	Oryza indica	27.44	2.00e-25	109.00
IUUC-Olo-080621	Oryza longistaminata	29.59	4.00e-13	68.60
IUUC-Ome-081261	Oryza meridionalis	23.28	2.00e-13	69.30
IUUC-Opu-083256	Oryza punctata	24.93	4.00e-15	75.10
IUUC-Osa-085892	Oryza sativa	27.44	2.00e-25	109.00
IUUC-Ola-086701	Oryzias latipes	48.57	4.00e-96	344.00
IUUC-Olu-087593	Ostreococcus lucimarinus	22.75	8.00e-07	47.80
IUUC-Oga-088152	Otolemur garnettii	92.16	0.00e+00	675.00
IUUC-Oar-089681	Ovis aries	90.76	0.00e+00	628.00
IUUC-Ptr-091142	Pan troglodytes	91.88	0.00e+00	651.00
IUUC-Pan-092435	Papio anubis	91.60	0.00e+00	626.00
IUUC-Psi-093255	Pelodiscus sinensis	68.54	3.00e-146	510.00
IUUC-Ppa-095829	Physcomitrella patens	29.48	2.00e-30	125.00
IUUC-Pfo-097339	Poecilia formosa	47.09	2.00e-90	325.00
IUUC-Pab-098274	Pongo abelii	91.04	0.00e+00	634.00
IUUC-Pop-099705	Populus trichocarpa	25.75	4.00e-28	118.00
IUUC-Pca-100451	Procavia capensis	86.52	0.00e+00	647.00
IUUC-Ppe-101220	Prunus persica	25.63	5.00e-26	111.00
IUUC-Pva-102385	Pteropus vampyrus	91.04	0.00e+00	637.00
IUUC-Rno-105765	Rattus norvegicus	83.19	9.00e-170	588.00
IUUC-Sha-106533	Sarcophilus harrisii	75.63	5.00e-161	559.00
IUUC-Smo-109248	Selaginella moellendorffii	26.72	3.00e-29	122.00
IUUC-Sit-110297	Setaria italica	26.11	7.00e-22	97.40
IUUC-Sly-111617	Solanum lycopersicum	32.20	1.00e-24	107.00
IUUC-Stu-112531	Solanum tuberosum	32.20	2.00e-24	105.00
IUUC-Sar-113647	Sorex araneus	82.63	8.00e-179	619.00
IUUC-Sbi-114621	Sorghum bicolor	27.58	8.00e-28	117.00
IUUC-Tgu-116482	Taeniopygia guttata	64.71	1.00e-125	442.00
IUUC-Tru-118622	Takifugu rubripes	49.59	3.00e-93	335.00
IUUC-Tsy-119474	Tarsius syrichta	89.36	0.00e+00	665.00
IUUC-Tni-120250	Tetraodon nigroviridis	47.55	1.00e-83	302.00
IUUC-Tca-121583	Theobroma cacao	28.57	7.00e-31	127.00
IUUC-Tae-123764	Triticum aestivum	34.01	6.00e-25	108.00
IUUC-Tur-126076	Triticum urartu	22.83	6.00e-15	74.70
IUUC-Tbe-127545	Tupaia belangeri	90.20	0.00e+00	626.00
IUUC-Ttr-128497	Tursiops truncatus	89.36	2.00e-178	617.00
IUUC-Vpa-130772	Vicugna pacos	90.48	0.00e+00	627.00
IUUC-Vvi-131632	Vitis vinifera	27.43	2.00e-32	132.00
IUUC-Xma-133432	Xiphophorus maculatus	47.11	2.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence