iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098274

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01212362

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000014443.2	ENSPPYT00000016799.2	ENSPPYP00000016152.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-26	89.3	239	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gHt +v+ ++f ++  ll++G++Dg+i++WD  + 
   Q: 239  GHTLGVSQVCFlPEsYLLLTGGNDGKIMLWDANSE 273
           8999********88899**************6655 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCLNASK EGLLASGAEG GDLTAWGEDG TPLGHTRFQG ADDVTSVLFS 60
PSCPTKLYAS HGETISVLDV RSLKDSLDHF HVNEEEINCL SLNQTENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTTCACAG AGTCTCCGGG ACCATTATGG CAGTCAAGTG GACGGGTGGG CATTCTTCTC 60
CTATCCTCTG CCTGAACGCA AGTAAAGAAG GGCTGCTGGC TTCTGGAGCA GAGGGTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

KEGG

pon:100438708

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	23.70	2.00e-14	73.90
IUUC-Aml-001203	Ailuropoda melanoleuca	90.78	1.00e-180	625.00
IUUC-Atr-002680	Amborella trichopoda	25.97	1.00e-21	97.10
IUUC-Apl-003656	Anas platyrhynchos	57.42	4.00e-103	367.00
IUUC-Aca-004987	Anolis carolinensis	64.35	2.00e-123	435.00
IUUC-Aly-006254	Arabidopsis lyrata	30.33	3.00e-27	115.00
IUUC-Ath-006632	Arabidopsis thaliana	29.18	2.00e-25	109.00
IUUC-Ame-011032	Astyanax mexicanus	45.97	1.00e-89	323.00
IUUC-Bta-012588	Bos taurus	81.28	1.00e-157	548.00
IUUC-Bdi-014532	Brachypodium distachyon	26.16	3.00e-24	105.00
IUUC-Bol-015542	Brassica oleracea	27.81	2.00e-19	90.90
IUUC-Bra-017046	Brassica rapa	30.33	1.00e-26	115.00
IUUC-Cja-019365	Callithrix jacchus	94.97	0.00e+00	688.00
IUUC-Cfa-021090	Canis familiaris	89.94	0.00e+00	630.00
IUUC-Cpo-021517	Cavia porcellus	83.01	2.00e-175	607.00
IUUC-Csa-023041	Chlorocebus sabaeus	96.93	0.00e+00	668.00
IUUC-Cho-024801	Choloepus hoffmanni	87.99	0.00e+00	638.00
IUUC-Dre-028437	Danio rerio	47.99	8.00e-86	310.00
IUUC-Dno-029267	Dasypus novemcinctus	87.99	0.00e+00	639.00
IUUC-Ete-032726	Echinops telfairi	73.46	3.00e-147	514.00
IUUC-Eca-033621	Equus caballus	90.73	2.00e-177	615.00
IUUC-Eeu-034461	Erinaceus europaeus	76.54	3.00e-158	550.00
IUUC-Fca-036410	Felis catus	89.39	1.00e-179	622.00
IUUC-Fal-036676	Ficedula albicollis	64.43	6.00e-127	447.00
IUUC-Gmo-039597	Gadus morhua	34.48	3.00e-18	85.90
IUUC-Gga-040760	Gallus gallus	62.31	2.00e-68	251.00
IUUC-Gac-041905	Gasterosteus aculeatus	49.05	4.00e-88	318.00
IUUC-Gma-043066	Glycine max	30.29	1.00e-16	80.90
IUUC-Ggo-044881	Gorilla gorilla	97.77	0.00e+00	673.00
IUUC-Hsa-046836	Homo sapiens	97.77	0.00e+00	670.00
IUUC-Hvu-047651	Hordeum vulgare	24.68	2.00e-22	100.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	91.04	0.00e+00	630.00
IUUC-Lch-050406	Latimeria chalumnae	52.41	2.00e-91	328.00
IUUC-Loc-052878	Lepisosteus oculatus	52.21	5.00e-98	350.00
IUUC-Laf-053547	Loxodonta africana	86.83	5.00e-180	623.00
IUUC-Mcc-054646	Macaca mulatta	96.93	0.00e+00	667.00
IUUC-Meu-056381	Macropus eugenii	75.42	1.00e-158	551.00
IUUC-Mtr-058656	Medicago truncatula	25.12	5.00e-18	85.10
IUUC-Mmr-061601	Microcebus murinus	88.52	0.00e+00	640.00
IUUC-Mdo-062305	Monodelphis domestica	75.70	7.00e-160	556.00
IUUC-Mmu-063213	Mus musculus	82.68	9.00e-170	589.00
IUUC-Mac-064940	Musa acuminata	24.88	4.00e-27	115.00
IUUC-Mpu-066629	Mustela putorius furo	89.94	0.00e+00	626.00
IUUC-Nle-069860	Nomascus leucogenys	97.77	0.00e+00	670.00
IUUC-Opr-071180	Ochotona princeps	84.51	9.00e-150	522.00
IUUC-Ont-071912	Oreochromis niloticus	47.41	9.00e-97	346.00
IUUC-Ocu-074874	Oryctolagus cuniculus	87.99	0.00e+00	644.00
IUUC-Oba-075815	Oryza barthii	25.09	1.00e-12	67.40
IUUC-Obr-076835	Oryza brachyantha	33.96	7.00e-20	90.90
IUUC-Ogu-077977	Oryza glumaepatula	25.38	2.00e-12	66.20
IUUC-Oin-079206	Oryza indica	25.65	2.00e-22	99.80
IUUC-Olo-080621	Oryza longistaminata	23.64	7.00e-12	64.70
IUUC-Ome-081261	Oryza meridionalis	24.90	5.00e-11	61.60
IUUC-Opu-083256	Oryza punctata	28.93	2.00e-12	66.60
IUUC-Osa-085892	Oryza sativa	25.65	2.00e-22	99.80
IUUC-Ola-086701	Oryzias latipes	46.37	4.00e-89	321.00
IUUC-Oga-088152	Otolemur garnettii	88.80	0.00e+00	640.00
IUUC-Oar-089681	Ovis aries	87.15	3.00e-172	597.00
IUUC-Ptr-091142	Pan troglodytes	98.04	0.00e+00	672.00
IUUC-Pan-092435	Papio anubis	96.93	0.00e+00	641.00
IUUC-Psi-093255	Pelodiscus sinensis	68.26	1.00e-142	499.00
IUUC-Ppa-095829	Physcomitrella patens	29.97	2.00e-29	123.00
IUUC-Pfo-097339	Poecilia formosa	45.29	8.00e-86	310.00
IUUC-Pop-099705	Populus trichocarpa	24.93	3.00e-27	115.00
IUUC-Pca-100451	Procavia capensis	85.11	0.00e+00	627.00
IUUC-Ppe-101220	Prunus persica	26.20	4.00e-26	112.00
IUUC-Pva-102385	Pteropus vampyrus	89.66	3.00e-180	623.00
IUUC-Rno-105765	Rattus norvegicus	81.56	4.00e-166	577.00
IUUC-Sha-106533	Sarcophilus harrisii	74.02	2.00e-155	541.00
IUUC-Smo-109248	Selaginella moellendorffii	26.98	3.00e-29	122.00
IUUC-Sit-110297	Setaria italica	25.48	1.00e-19	90.10
IUUC-Sly-111617	Solanum lycopersicum	31.86	7.00e-23	101.00
IUUC-Stu-112531	Solanum tuberosum	31.86	9.00e-23	100.00
IUUC-Sar-113647	Sorex araneus	80.45	3.00e-169	587.00
IUUC-Sbi-114621	Sorghum bicolor	26.49	4.00e-25	108.00
IUUC-Tgu-116482	Taeniopygia guttata	64.71	3.00e-122	431.00
IUUC-Tru-118622	Takifugu rubripes	48.24	3.00e-86	311.00
IUUC-Tsy-119474	Tarsius syrichta	87.99	0.00e+00	641.00
IUUC-Tni-120250	Tetraodon nigroviridis	46.22	4.00e-78	284.00
IUUC-Tca-121583	Theobroma cacao	27.79	3.00e-28	119.00
IUUC-Tae-123764	Triticum aestivum	25.71	5.00e-24	105.00
IUUC-Tur-126076	Triticum urartu	22.25	1.00e-12	67.00
IUUC-Tbe-127545	Tupaia belangeri	88.80	5.00e-174	603.00
IUUC-Ttr-128497	Tursiops truncatus	87.15	3.00e-173	600.00
IUUC-Vpa-130772	Vicugna pacos	88.83	2.00e-176	611.00
IUUC-Vvi-131632	Vitis vinifera	26.30	7.00e-30	124.00
IUUC-Xma-133432	Xiphophorus maculatus	46.46	2.00e-87	315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence