iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-062450

UUCD1 version

UUC-MoD-00305

Ensembl Protein ID

ENSMODP00000029379.1

UniProt Accession

F6VB62; F6VB62_MONDO

Protein Name

Uncharacterized protein

Gene Name

RBBP4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000017415.2	ENSMODT00000030953.1	ENSMODP00000029379.1
ENSMODG00000017415.2	ENSMODT00000022116.2	ENSMODP00000021738.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-37	124.5	272	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 272  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 306
           **********96554568*************9875 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MADKEAAFDD AVEERVINEE YKIWKKNTPF LYDLVMTHAL EWPSLTAQWL PDVTRPEGKD 60
FSIHRLVLGT HTSDEQNHLV IASVQLPNDD AQFDASHYDS EKGEFGGFGS VSGKIEIEIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGTCAGCTT CTCCGCCCGC CATGGCCGAC AAGGAAGGTG AGCGGAGCCA AGGGAGGGAA 60
GGGGGCTGAG CACGGGGGAG GGGGCCTCCG CGGCAGCCCA CGCCAGCCCT CCCTGACTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0000790--C:nuclear chromatin
GO:0016581--C:NuRD complex
GO:0016589--C:NURF complex
GO:0008094--F:DNA-dependent ATPase activity
GO:0031492--F:nucleosomal DNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980--F:RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0006336--P:DNA replication-independent nucleosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001339	Ailuropoda melanoleuca	98.75	0.00e+00	813.00
IUUC-Apl-003952	Anas platyrhynchos	99.50	0.00e+00	828.00
IUUC-Aca-004508	Anolis carolinensis	98.52	0.00e+00	830.00
IUUC-Acl-008163	Aspergillus clavatus	52.93	3.00e-124	438.00
IUUC-Afl-008645	Aspergillus flavus	52.88	4.00e-123	434.00
IUUC-Afu-009091	Aspergillus fumigatus	53.18	2.00e-124	438.00
IUUC-Ani-009478	Aspergillus nidulans	48.60	1.00e-102	366.00
IUUC-Ang-009707	Aspergillus niger	52.42	2.00e-119	422.00
IUUC-Aor-010028	Aspergillus oryzae	52.88	4.00e-123	434.00
IUUC-Ate-010416	Aspergillus terreus	52.42	3.00e-123	435.00
IUUC-Ame-010598	Astyanax mexicanus	97.29	0.00e+00	825.00
IUUC-Bgr-012001	Blumeria graminis	49.02	2.00e-106	379.00
IUUC-Bta-012851	Bos taurus	99.51	0.00e+00	838.00
IUUC-Bci-013815	Botrytis cinerea	50.75	4.00e-124	437.00
IUUC-Cja-019884	Callithrix jacchus	99.51	0.00e+00	838.00
IUUC-Cfa-020343	Canis familiaris	99.51	0.00e+00	838.00
IUUC-Cpo-021591	Cavia porcellus	99.51	0.00e+00	838.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	62.07	7.00e-154	536.00
IUUC-Cho-024506	Choloepus hoffmanni	99.01	0.00e+00	828.00
IUUC-Cin-025589	Ciona intestinalis	90.39	0.00e+00	785.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	49.25	9.00e-117	413.00
IUUC-Cne-026792	Cryptococcus neoformans	56.11	6.00e-135	473.00
IUUC-Cme-027307	Cyanidioschyzon merolae	52.10	2.00e-127	449.00
IUUC-Dre-028742	Danio rerio	97.78	0.00e+00	827.00
IUUC-Dno-029114	Dasypus novemcinctus	99.51	0.00e+00	838.00
IUUC-Dse-031282	Dothistroma septosporum	47.40	2.00e-102	365.00
IUUC-Ete-032731	Echinops telfairi	99.51	0.00e+00	838.00
IUUC-Eca-033533	Equus caballus	98.00	0.00e+00	808.00
IUUC-Eeu-034644	Erinaceus europaeus	100.00	1.00e-130	459.00
IUUC-Fca-036202	Felis catus	99.51	0.00e+00	838.00
IUUC-Fal-037084	Ficedula albicollis	99.50	0.00e+00	827.00
IUUC-Fox-037974	Fusarium oxysporum	50.25	5.00e-121	427.00
IUUC-Gmo-039214	Gadus morhua	97.05	0.00e+00	818.00
IUUC-Ggr-039741	Gaeumannomyces graminis	51.01	9.00e-117	413.00
IUUC-Gga-040396	Gallus gallus	99.51	0.00e+00	838.00
IUUC-Gac-041389	Gasterosteus aculeatus	95.59	0.00e+00	808.00
IUUC-Ggo-045422	Gorilla gorilla	90.71	0.00e+00	740.00
IUUC-Hsa-045683	Homo sapiens	99.51	0.00e+00	838.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	99.51	0.00e+00	838.00
IUUC-Kpa-049119	Komagataella pastoris	37.38	5.00e-72	265.00
IUUC-Loc-052473	Lepisosteus oculatus	98.28	0.00e+00	833.00
IUUC-Laf-054114	Loxodonta africana	99.51	0.00e+00	838.00
IUUC-Mcc-055648	Macaca mulatta	99.26	0.00e+00	830.00
IUUC-Meu-056490	Macropus eugenii	99.51	0.00e+00	838.00
IUUC-Mpo-057602	Magnaporthe poae	50.25	5.00e-116	410.00
IUUC-Mla-058884	Melampsora laricipopulina	53.81	2.00e-127	449.00
IUUC-Mga-059452	Meleagris gallopavo	99.50	0.00e+00	827.00
IUUC-Mvi-060450	Microbotryum violaceum	58.46	1.00e-135	476.00
IUUC-Mmr-060678	Microcebus murinus	99.75	0.00e+00	830.00
IUUC-Mmu-063282	Mus musculus	99.51	0.00e+00	838.00
IUUC-Mpu-066529	Mustela putorius furo	98.77	0.00e+00	832.00
IUUC-Mlu-068072	Myotis lucifugus	99.51	0.00e+00	838.00
IUUC-Nfi-068374	Neosartorya fischeri	53.18	4.00e-121	427.00
IUUC-Nle-069577	Nomascus leucogenys	99.51	0.00e+00	838.00
IUUC-Opr-070245	Ochotona princeps	83.25	0.00e+00	655.00
IUUC-Ont-071809	Oreochromis niloticus	97.29	0.00e+00	826.00
IUUC-Oan-072839	Ornithorhynchus anatinus	99.25	0.00e+00	822.00
IUUC-Ocu-074515	Oryctolagus cuniculus	93.35	0.00e+00	722.00
IUUC-Ola-086664	Oryzias latipes	97.04	0.00e+00	819.00
IUUC-Olu-087579	Ostreococcus lucimarinus	64.05	4.00e-145	507.00
IUUC-Oga-088364	Otolemur garnettii	90.20	0.00e+00	750.00
IUUC-Oar-089652	Ovis aries	99.51	0.00e+00	838.00
IUUC-Psi-093300	Pelodiscus sinensis	99.46	0.00e+00	766.00
IUUC-Pma-094307	Petromyzon marinus	93.84	0.00e+00	805.00
IUUC-Pno-095153	Phaeosphaeria nodorum	47.98	8.00e-110	390.00
IUUC-Pab-097697	Pongo abelii	99.51	0.00e+00	838.00
IUUC-Pca-100642	Procavia capensis	89.85	0.00e+00	738.00
IUUC-Pva-102253	Pteropus vampyrus	99.51	0.00e+00	838.00
IUUC-Pgr-103441	Puccinia graminis	54.22	4.00e-123	434.00
IUUC-Ptt-103937	Puccinia triticina	30.29	4.00e-24	106.00
IUUC-Pte-104332	Pyrenophora teres	48.44	3.00e-112	398.00
IUUC-Pyt-104516	Pyrenophora triticirepentis	48.44	2.00e-112	399.00
IUUC-Rno-105678	Rattus norvegicus	99.51	0.00e+00	838.00
IUUC-Sce-106364	Saccharomyces cerevisiae	38.32	3.00e-71	262.00
IUUC-Sha-106663	Sarcophilus harrisii	99.50	0.00e+00	827.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	48.03	2.00e-106	379.00
IUUC-Spo-108145	Schizosaccharomyces pombe	52.23	1.00e-119	422.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	31.90	8.00e-33	134.00
IUUC-Sre-114980	Sporisorium reilianum	55.56	4.00e-137	481.00
IUUC-Tgu-116925	Taeniopygia guttata	99.25	0.00e+00	827.00
IUUC-Tru-117549	Takifugu rubripes	96.57	0.00e+00	815.00
IUUC-Tni-120398	Tetraodon nigroviridis	96.57	0.00e+00	819.00
IUUC-Tme-126949	Tuber melanosporum	55.19	5.00e-129	454.00
IUUC-Uma-129424	Ustilago maydis	54.57	3.00e-137	481.00
IUUC-Vda-129873	Verticillium dahliae	50.37	1.00e-122	432.00
IUUC-Vpa-130079	Vicugna pacos	99.01	0.00e+00	832.00
IUUC-Xma-133066	Xiphophorus maculatus	97.29	0.00e+00	826.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence